RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 C15orf53Q8NAA6 179 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 SPTSSBQ8NFR3 76 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 TSKUQ8WUA8 353 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 LSM10Q969L4 123 aaKnown RBP1.09□□□□□ -2.23
SRP54-204ENST00000553923 LIMD2Q9BT23 127 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 NDUFA12Q9UI09 145 aa1.09□□□□□ -2.23
SRP54-204ENST00000553923 ANKRD31Q8N7Z5 1873 aa1.09□□□□□ -2.24
SRP54-204ENST00000553923 SCN8AQ9UQD0 1980 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 SMARCA4P51532 1647 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 CPAMD8Q8IZJ3 1885 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 TRAV30A0A087WSZ9 112 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 PIGBOS1A0A0B4J2F0 54 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 TRBV6-4A0A1B0GX49 114 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 FAM24AA6NFZ4 105 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 CCL25O15444 150 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 TNFP01375 233 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 SLC25A6P12236 298 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 UBE2G1P62253 170 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 BTG2P78543 158 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 LYPD5Q6UWN5 251 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 ACBD7Q8N6N7 88 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 PATE1Q8WXA2 126 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 TMEM141Q96I45 108 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 SPANXDQ9BXN6 97 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 ATG5Q9H1Y0 275 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 MRPL36Q9P0J6 103 aaKnown RBP1.08□□□□□ -2.24
SRP54-204ENST00000553923 TMEM14CQ9P0S9 112 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 IER3IP1Q9Y5U9 82 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 SNURFQ9Y675 71 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 SCN9AQ15858 1988 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 UBR2Q8IWV8 1755 aa1.08□□□□□ -2.24
SRP54-204ENST00000553923 MYO16Q9Y6X6 1858 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 PLXNB1O43157 2135 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 ERBINQ96RT1 1412 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 SEC16AO15027 2179 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 OOSP1A8MZH6 123 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 JMJD7-PLA2G4BH0Y9G9 81 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 PKIAP61925 76 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 MPV17LQ2QL34 196 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 Q6AWC8 147 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP1.07□□□□□ -2.24
SRP54-204ENST00000553923 Q6ZS92 163 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 PPDPFLQ8WWR9 84 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 DSCR8Q96T75 97 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 RPRMQ9NS64 109 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 MRPL35Q9NZE8 188 aaKnown RBP1.07□□□□□ -2.24
SRP54-204ENST00000553923 MYH7BA7E2Y1 1941 aa1.07□□□□□ -2.24
SRP54-204ENST00000553923 CNTLNQ9NXG0 1405 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 FBN1P35555 2871 aaKnown RBP1.06□□□□□ -2.24
SRP54-204ENST00000553923 CFTRP13569 1480 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 MYOM2P54296 1465 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 MRC2Q9UBG0 1479 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 COL5A1P20908 1838 aaPredicted RBP1.06□□□□□ -2.24
SRP54-204ENST00000553923 PRR14LQ5THK1 2151 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 TRAV2A0A0B4J234 112 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 NUPR1O60356 82 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 RNASE3P12724 160 aaKnown RBP1.06□□□□□ -2.24
SRP54-204ENST00000553923 CBLN1P23435 193 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 SNCAP37840 140 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 INSL4Q14641 139 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 SPRNQ5BIV9 151 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 SLC48A1Q6P1K1 146 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 KRTAP26-1Q6PEX3 210 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 Q6ZRN7 208 aaPredicted RBP1.06□□□□□ -2.24
SRP54-204ENST00000553923 LINC00299Q6ZSB3 139 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 LINC00526Q96FQ7 95 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 ZNF625Q96I27 306 aaPredicted RBP1.06□□□□□ -2.24
SRP54-204ENST00000553923 Q9H521 79 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 TMEM106BQ9NUM4 274 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 PHLPP1O60346 1717 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 COL4A2P08572 1712 aa1.06□□□□□ -2.24
SRP54-204ENST00000553923 A2ML1A8K2U0 1454 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 PZPP20742 1482 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 SBF1O95248 1867 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 DISP1Q96F81 1524 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 MYH10P35580 1976 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 TRBV6-7A0A0A0MS04 114 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 NUPR2A6NF83 97 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 IGHV3-33P01772 117 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 GYPBP06028 91 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 CCKP06307 115 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 IL9P15248 144 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 GNG2P59768 71 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 KRTAP12-3P60328 96 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 C9orf116Q5BN46 136 aaPredicted RBP1.05□□□□□ -2.24
SRP54-204ENST00000553923 COL5A1-AS1Q5SY13 56 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 C12orf73Q69YU5 71 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 IFI27L1Q96BM0 104 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 DMAC1Q96GE9 116 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 AP4S1Q9Y587 144 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 NALCNQ8IZF0 1738 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 CACNA1DQ01668 2161 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 LAMB4A4D0S4 1761 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 VIRMAQ69YN4 1812 aaKnown RBP1.05□□□□□ -2.24
SRP54-204ENST00000553923 SPEF2Q9C093 1822 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 CDK5RAP2Q96SN8 1893 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 CECR2Q9BXF3 1484 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 CUL9Q8IWT3 2517 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 TRPM6Q9BX84 2022 aa1.05□□□□□ -2.24
SRP54-204ENST00000553923 RIMS1Q86UR5 1692 aaKnown RBP1.04□□□□□ -2.24
Retrieved 100 of 20,778 RNA–protein pairs in 57.6 ms