RNA–Protein interactions for RNA: ENST00000553857.5

UBR7-203, Transcript of ubiquitin protein ligase E3 component n-recognin 7 (putative), humanhuman

TSL 3

Gene UBR7, Length 522 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR7-203ENST00000553857 SNAI2O43623 268 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 NCR2O95944 276 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 DLX1P56177 255 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 RBX1P62877 108 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 PRB3Q04118 309 aaPredicted RBP4.33□□□□□ -1.72
UBR7-203ENST00000553857 ERCC8Q13216 396 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 PRR30Q53SZ7 412 aaPredicted RBP4.33□□□□□ -1.72
UBR7-203ENST00000553857 ADAMTSL5Q6ZMM2 481 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 C2orf91Q6ZV80 131 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 CEND1Q8N111 149 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 SVIPQ8NHG7 77 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 RNASE8Q8TDE3 154 aaKnown RBP4.33□□□□□ -1.72
UBR7-203ENST00000553857 RNF185Q96GF1 192 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 KIR2DL4Q99706 377 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 MCRIP2Q9BUT9 160 aaKnown RBP4.33□□□□□ -1.72
UBR7-203ENST00000553857 SMIM2Q9BVW6 85 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 AGPAT4-IT1Q9H0P7 198 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 CHTOPQ9Y3Y2 248 aaKnown RBP4.33□□□□□ -1.72
UBR7-203ENST00000553857 SMAD5-AS1Q9Y6J3 95 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 URB1O60287 2271 aaKnown RBP4.33□□□□□ -1.72
UBR7-203ENST00000553857 TNCP24821 2201 aa4.33□□□□□ -1.72
UBR7-203ENST00000553857 LAMA1P25391 3075 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 TRAV8-6A0A0B4J262 113 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 IGHV1-69DA0A0B4J2H0 117 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 MYMXA0A1B0GTQ4 84 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 F8VRH5 84 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 SMKR1H3BMG3 65 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 VCYO14598 125 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 IGHV1-69P01742 117 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 FGF6P10767 208 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 ZNF80P51504 273 aaPredicted RBP4.32□□□□□ -1.72
UBR7-203ENST00000553857 CRIP2P52943 208 aaPredicted RBP4.32□□□□□ -1.72
UBR7-203ENST00000553857 TCTAP57738 103 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 DSCR9P59020 149 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 SUMO2P61956 95 aaKnown RBP4.32□□□□□ -1.72
UBR7-203ENST00000553857 RPL24P83731 157 aaKnown RBP4.32□□□□□ -1.72
UBR7-203ENST00000553857 SRSF9Q13242 221 aaKnown RBP eCLIP4.32□□□□□ -1.72
UBR7-203ENST00000553857 ZC2HC1BQ5TFG8 222 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 CLEC2AQ6UVW9 174 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 SCGB1D4Q6XE38 83 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 MTURNQ8N3F0 131 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 C5orf56Q8N8D9 126 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 RAB37Q96AX2 223 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 TMEM141Q96I45 108 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 TM2D2Q9BX73 214 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 CYSLTR1Q9Y271 337 aa4.32□□□□□ -1.72
UBR7-203ENST00000553857 TRBV25-1A0A075B6N4 114 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 A0A096LNJ9 63 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 IGHV3-35A0A0C4DH35 117 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 G3V4G9 280 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 K7EMT4 169 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 DUSP14O95147 198 aaKnown RBP4.31□□□□□ -1.72
UBR7-203ENST00000553857 MGPP08493 103 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 SCGB1A1P11684 91 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 KRTAP10-7P60409 375 aaPredicted RBP4.31□□□□□ -1.72
UBR7-203ENST00000553857 SNRPD3P62318 126 aaKnown RBP4.31□□□□□ -1.72
UBR7-203ENST00000553857 RPL32P62910 135 aaKnown RBP4.31□□□□□ -1.72
UBR7-203ENST00000553857 ADORA2A-AS1P86434 159 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 NDPQ00604 133 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 GTSCR1Q86UQ5 136 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 RNF182Q8N6D2 247 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 TOMM6Q96B49 74 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 CSTL1Q9H114 145 aa4.31□□□□□ -1.72
UBR7-203ENST00000553857 NHP2Q9NX24 153 aaKnown RBP4.31□□□□□ -1.72
UBR7-203ENST00000553857 CADP27708 2225 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 TRAV40A0A0B4J280 105 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 IGKV3D-20A0A0C4DH25 116 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 IGHV3-66A0A0C4DH42 116 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 TMEM89A2RUT3 159 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 H3BVH4 76 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 LY6HO94772 140 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 IGF1P05019 195 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 PF4V1P10720 104 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 PPIFP30405 207 aaKnown RBP4.3□□□□□ -1.72
UBR7-203ENST00000553857 RNASE4P34096 147 aaKnown RBP4.3□□□□□ -1.72
UBR7-203ENST00000553857 LOXL1Q08397 574 aaPredicted RBP4.3□□□□□ -1.72
UBR7-203ENST00000553857 KRTAP5-11Q6L8G4 156 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 UFSP1Q6NVU6 142 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 FOXI2Q6ZQN5 318 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 PCP2Q8IVA1 136 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 GLMPQ8WWB7 406 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 ZNF479Q96JC4 524 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 DAZ1Q9NQZ3 744 aaKnown RBP4.3□□□□□ -1.72
UBR7-203ENST00000553857 MRPL35Q9NZE8 188 aaKnown RBP4.3□□□□□ -1.72
UBR7-203ENST00000553857 MSRB1Q9NZV6 116 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 HHLA3Q9XRX5 114 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 TRIOO75962 3097 aa4.3□□□□□ -1.72
UBR7-203ENST00000553857 GPR179Q6PRD1 2367 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 SZT2Q5T011 3432 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 SVILO95425 2214 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 TRBV20-1A0A075B6N2 111 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 IGHV3OR16-8A0A075B7F1 116 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 PRAC2D3DTV9 90 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 E9PLD3 99 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 IGHG4P01861 327 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 HLA-DMBP28068 263 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 KRTAP10-6P60371 365 aaPredicted RBP4.29□□□□□ -1.72
UBR7-203ENST00000553857 LMO4P61968 165 aa4.29□□□□□ -1.72
UBR7-203ENST00000553857 C12orf74Q32Q52 190 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms