RNA–Protein interactions for RNA: ENST00000553447.6

PSEN1-206, Transcript of presenilin 1, humanhuman

TSL 4

Gene PSEN1, Length 572 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-206ENST00000553447 ANXA2RQ3ZCQ2 193 aa12.93□□□□□ -0.34
PSEN1-206ENST00000553447 MUC21Q5SSG8 566 aa12.93□□□□□ -0.34
PSEN1-206ENST00000553447 ATP5L2Q7Z4Y8 100 aa12.93□□□□□ -0.34
PSEN1-206ENST00000553447 FER1L6-AS1Q8NA97 138 aa12.93□□□□□ -0.34
PSEN1-206ENST00000553447 AMBPP02760 352 aa12.92□□□□□ -0.34
PSEN1-206ENST00000553447 FRMD6-AS1P0C7T7 363 aa12.92□□□□□ -0.34
PSEN1-206ENST00000553447 CTRLP40313 264 aa12.92□□□□□ -0.34
PSEN1-206ENST00000553447 TPPP3Q9BW30 176 aa12.92□□□□□ -0.34
PSEN1-206ENST00000553447 TMA7Q9Y2S6 64 aaKnown RBP12.92□□□□□ -0.34
PSEN1-206ENST00000553447 A0A1B0GXF2 115 aa12.91□□□□□ -0.34
PSEN1-206ENST00000553447 COX19Q49B96 90 aa12.91□□□□□ -0.34
PSEN1-206ENST00000553447 PRR31Q5SQ13 230 aa12.91□□□□□ -0.34
PSEN1-206ENST00000553447 RASL11AQ6T310 242 aa12.91□□□□□ -0.34
PSEN1-206ENST00000553447 LYZL1Q6UWQ5 148 aa12.91□□□□□ -0.34
PSEN1-206ENST00000553447 FAM159AQ6UWV7 190 aa12.91□□□□□ -0.34
PSEN1-206ENST00000553447 BORCS7Q96B45 105 aa12.91□□□□□ -0.34
PSEN1-206ENST00000553447 A0A1B0GUT8 65 aa12.9□□□□□ -0.34
PSEN1-206ENST00000553447 ARMS2P0C7Q2 107 aa12.9□□□□□ -0.34
PSEN1-206ENST00000553447 RBMY1A1P0DJD3 496 aaKnown RBP12.9□□□□□ -0.34
PSEN1-206ENST00000553447 RBMY1CP0DJD4 496 aa12.9□□□□□ -0.34
PSEN1-206ENST00000553447 RBMY1FQ15415 496 aaKnown RBP12.9□□□□□ -0.34
PSEN1-206ENST00000553447 WDR73Q6P4I2 378 aa12.9□□□□□ -0.34
PSEN1-206ENST00000553447 DEFB125Q8N687 156 aa12.9□□□□□ -0.34
PSEN1-206ENST00000553447 KCNS1Q96KK3 526 aa12.9□□□□□ -0.34
PSEN1-206ENST00000553447 C1orf196B1AJZ1 125 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 SNURFLB1AK76 121 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 INSP01308 110 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 TRGC2P03986 189 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 NUTF2P61970 127 aaKnown RBP12.89□□□□□ -0.35
PSEN1-206ENST00000553447 HBBP68871 147 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 RIGQ13278 110 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 TDRG1Q3Y452 100 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 TMEM136Q6ZRR5 245 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 C20orf144Q9BQM9 153 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 GNB1LQ9BYB4 327 aa12.89□□□□□ -0.35
PSEN1-206ENST00000553447 IGHV1OR15-1A0A075B7D0 117 aa12.88□□□□□ -0.35
PSEN1-206ENST00000553447 F2Z2F3 143 aa12.88□□□□□ -0.35
PSEN1-206ENST00000553447 GNRH2O43555 120 aa12.88□□□□□ -0.35
PSEN1-206ENST00000553447 RPL35AP18077 110 aaKnown RBP12.88□□□□□ -0.35
PSEN1-206ENST00000553447 ASIPP42127 132 aa12.88□□□□□ -0.35
PSEN1-206ENST00000553447 MDFIQ99750 246 aa12.88□□□□□ -0.35
PSEN1-206ENST00000553447 TRAPPC1Q9Y5R8 145 aa12.88□□□□□ -0.35
PSEN1-206ENST00000553447 A0A1B0GW15 77 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 H3BVH4 76 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 PHOX2AO14813 284 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 SNAI2O43623 268 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 MT-ND6P03923 174 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 OR5AL1P0C617 328 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 MED14OSP0DP75 135 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 CAMPP49913 170 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 RAB4BP61018 213 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 OXLD1Q5BKU9 147 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 MORN3Q6PF18 240 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-206ENST00000553447 SSBP4Q9BWG4 385 aaPredicted RBP12.87□□□□□ -0.35
PSEN1-206ENST00000553447 CNFNQ9BYD5 112 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 XCL2Q9UBD3 114 aa12.87□□□□□ -0.35
PSEN1-206ENST00000553447 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 MUC21A0A140T8X8 626 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 HLA-DQA1P01909 254 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
PSEN1-206ENST00000553447 RAB5BP61020 215 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 FABP9Q0Z7S8 132 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 LURAP1LQ8IV03 231 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 Q8N1Y9 231 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 FRZBQ92765 325 aa12.86□□□□□ -0.35
PSEN1-206ENST00000553447 MRPL18Q9H0U6 180 aaKnown RBP12.86□□□□□ -0.35
PSEN1-206ENST00000553447 S100A8P05109 93 aa12.85□□□□□ -0.35
PSEN1-206ENST00000553447 ZFP82Q8N141 532 aa12.85□□□□□ -0.35
PSEN1-206ENST00000553447 GATD1Q8NB37 220 aa12.85□□□□□ -0.35
PSEN1-206ENST00000553447 TP53TG3Q9ULZ0 132 aa12.85□□□□□ -0.35
PSEN1-206ENST00000553447 VWFP04275 2813 aa12.84□□□□□ -0.35
PSEN1-206ENST00000553447 IGHV3-16A0A0C4DH30 117 aa12.84□□□□□ -0.35
PSEN1-206ENST00000553447 GIG44P09565 113 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-206ENST00000553447 RNASE3P12724 160 aaKnown RBP12.84□□□□□ -0.35
PSEN1-206ENST00000553447 SSTP61278 116 aa12.84□□□□□ -0.35
PSEN1-206ENST00000553447 CACNG7P62955 275 aa12.84□□□□□ -0.35
PSEN1-206ENST00000553447 OR10AG1Q8NH19 301 aa12.84□□□□□ -0.35
PSEN1-206ENST00000553447 LINC00467Q9BRT7 94 aa12.84□□□□□ -0.35
PSEN1-206ENST00000553447 SCRT2Q9NQ03 307 aa12.84□□□□□ -0.35
PSEN1-206ENST00000553447 TIMM8BQ9Y5J9 83 aaPredicted RBP12.84□□□□□ -0.35
PSEN1-206ENST00000553447 TRGV11A0A075B6L2 103 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 CBY3A6NI87 242 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 NTF3P20783 257 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 EGFEM1PQ0D2K5 195 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 TWIST1Q15672 202 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 C1orf158Q8N1D5 194 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 TMEM256Q8N2U0 113 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 LINC01587Q99440 93 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 C1QTNF4Q9BXJ3 329 aa12.83□□□□□ -0.36
PSEN1-206ENST00000553447 STAB1Q9NY15 2570 aa12.82□□□□□ -0.36
PSEN1-206ENST00000553447 IGHV4-4A0A075B6R2 117 aa12.82□□□□□ -0.36
PSEN1-206ENST00000553447 C9orf85Q96MD7 179 aa12.82□□□□□ -0.36
PSEN1-206ENST00000553447 NOTCH3Q9UM47 2321 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 APCSP02743 223 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 TRGC1P0CF51 173 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 KRTAP10-11P60412 298 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 SLAQ13239 276 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 SPANXN1Q5VSR9 72 aa12.81□□□□□ -0.36
PSEN1-206ENST00000553447 ZNF493Q6ZR52 646 aa12.81□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms