RNA–Protein interactions for RNA: ENST00000553396.1

LINC00517-201, long intergenic non-protein coding RNA 517, humanhuman

TSL 3

Gene LINC00517, Length 774 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00517-201ENST00000553396 HMSDA8MTL9 139 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 KRTAP9-1A8MXZ3 250 aaPredicted RBP7.11□□□□□ -1.27
LINC00517-201ENST00000553396 BCL2L11O43521 198 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 GNRH2O43555 120 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 IFNA7P01567 189 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 IGLV2-11P01706 119 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 TYMSP04818 313 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 ZNF80P51504 273 aaPredicted RBP7.11□□□□□ -1.27
LINC00517-201ENST00000553396 CCL18P55774 89 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 FLI1Q01543 452 aaPredicted RBP7.11□□□□□ -1.27
LINC00517-201ENST00000553396 LGALS9BQ3B8N2 356 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 LINC00479Q96M42 142 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 C18orf15Q96N68 181 aa7.11□□□□□ -1.27
LINC00517-201ENST00000553396 A0A1B0GV50 99 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 FAM74A7A6NL05 159 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 PFDN1O60925 122 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 GCGP01275 180 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 TDRG1Q3Y452 100 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 ZFP69Q49AA0 526 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 TMEM75Q8N9X5 138 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 VSIG2Q96IQ7 327 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 KRTAP9-2Q9BYQ4 174 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 LINC00588Q9Y4M8 146 aa7.1□□□□□ -1.27
LINC00517-201ENST00000553396 IGHV3-16A0A0C4DH30 117 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 PEX7O00628 323 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 SFTA3P0C7M3 94 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 SEC11BP0C7V7 166 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 FAM3BP58499 235 aaPredicted RBP7.09□□□□□ -1.27
LINC00517-201ENST00000553396 SMUG1Q53HV7 270 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 Q6ZR54 194 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 TMUB2Q71RG4 321 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 ZNRF2Q8NHG8 242 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 STOML3Q8TAV4 291 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 FAM213BQ8TBF2 198 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 SPXQ9BT56 116 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 SDF2L1Q9HCN8 221 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 C11orf21Q9P2W6 132 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 ARL2-SNX15V9GYD0 113 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 DNAH2Q9P225 4427 aa7.09□□□□□ -1.27
LINC00517-201ENST00000553396 A0A096LPF7 62 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 FBLL1A6NHQ2 334 aaKnown RBP7.08□□□□□ -1.28
LINC00517-201ENST00000553396 H3BNG1 76 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 RTL8CO15255 209 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 PAX4O43316 350 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 PFN1P07737 140 aaKnown RBP7.08□□□□□ -1.28
LINC00517-201ENST00000553396 PPT1P50897 306 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 CST9LP1Q5W188 147 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 Q86TA4 180 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 SFT2D1Q8WV19 159 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 ZNF479Q96JC4 524 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 KCNS1Q96KK3 526 aa7.08□□□□□ -1.28
LINC00517-201ENST00000553396 TRGV4A0A0C4DH28 118 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 UMAD1C9J7I0 102 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 M0R2P5 195 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 EIF5AP63241 154 aaKnown RBP7.07□□□□□ -1.28
LINC00517-201ENST00000553396 FHL2Q14192 279 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 ESRGQ1W209 222 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 SAPCD1Q5SSQ6 148 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 RASL10AQ92737 203 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 HIST1H2BAQ96A08 127 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 NKX6-2Q9C056 277 aaPredicted RBP7.07□□□□□ -1.28
LINC00517-201ENST00000553396 ICOSQ9Y6W8 199 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 FAT2Q9NYQ8 4349 aa7.07□□□□□ -1.28
LINC00517-201ENST00000553396 hCG_2014768A0A024R1R8 64 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 NBDYA0A0U1RRE5 68 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 KRTAP9-6A0A140TA67 174 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 PRSS29PA6NIE9 313 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 C9JCJ5 164 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 PAGE4O60829 102 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 TPT1P13693 172 aaKnown RBP7.06□□□□□ -1.28
LINC00517-201ENST00000553396 CRYBA4P53673 196 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 UBE2G1P62253 170 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 C1orf134Q5TEV5 83 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 Q6ZNX1 250 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 LINC00336Q6ZUF6 198 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 PRO0255Q9UI72 69 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 HHLA3Q9XRX5 114 aa7.06□□□□□ -1.28
LINC00517-201ENST00000553396 TRAV4A0A0B4J268 109 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 AKR1C3P42330 323 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 LGALSLQ3ZCW2 172 aaPredicted RBP7.05□□□□□ -1.28
LINC00517-201ENST00000553396 ZNF876PQ49A33 203 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 SOHLH1Q5JUK2 328 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 DPPA3Q6W0C5 159 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 TCTE3Q8IZS6 198 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 OR4C5Q8NGB2 326 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 MBD3L1Q8WWY6 194 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 ZC2HC1AQ96GY0 325 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 Q9H8V8 135 aa7.05□□□□□ -1.28
LINC00517-201ENST00000553396 MRPS16Q9Y3D3 137 aaKnown RBP7.05□□□□□ -1.28
LINC00517-201ENST00000553396 IGKV3D-20A0A0C4DH25 116 aa7.04□□□□□ -1.28
LINC00517-201ENST00000553396 M0R036 132 aa7.04□□□□□ -1.28
LINC00517-201ENST00000553396 H2AFB1P0C5Y9 115 aa7.04□□□□□ -1.28
LINC00517-201ENST00000553396 RNASE3P12724 160 aaKnown RBP7.04□□□□□ -1.28
LINC00517-201ENST00000553396 SLAQ13239 276 aa7.04□□□□□ -1.28
LINC00517-201ENST00000553396 NHLRC2Q8NBF2 726 aa7.04□□□□□ -1.28
LINC00517-201ENST00000553396 PCNPQ8WW12 178 aaKnown RBP7.04□□□□□ -1.28
LINC00517-201ENST00000553396 FMC1Q96HJ9 113 aa7.04□□□□□ -1.28
LINC00517-201ENST00000553396 C9orf85Q96MD7 179 aa7.04□□□□□ -1.28
LINC00517-201ENST00000553396 IGHV3-73A0A0B4J1V6 119 aa7.03□□□□□ -1.28
LINC00517-201ENST00000553396 A0A1B0GVY2 172 aa7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 50.1 ms