RNA–Protein interactions for RNA: ENST00000552896.1

TRAFD1-209, Transcript of TRAF-type zinc finger domain containing 1, humanhuman

APPRIS ALT2 TSL 3

Gene TRAFD1, Length 983 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAFD1-209ENST00000552896 SMUG1Q53HV7 270 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 MUC21Q5SSG8 566 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 FAM159AQ6UWV7 190 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 ALKAL2Q6UX46 152 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 LINC00476Q8WZB0 136 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 FAM210BQ96KR6 192 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 LINC00479Q96M42 142 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 GSN-AS1Q9NRJ2 163 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 GNG13Q9P2W3 67 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 TP53TG3Q9ULZ0 132 aa8.3□□□□□ -1.08
TRAFD1-209ENST00000552896 IGLL5B9A064 214 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 LTAP01374 205 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 IFNA1P01562 189 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 ATP5G1P05496 136 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 UBE2G1P62253 170 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 CCL20P78556 96 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 KCNS1Q96KK3 526 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 TXNDC17Q9BRA2 123 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 NAGKQ9UJ70 344 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 ZFP30Q9Y2G7 519 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 VPS13DQ5THJ4 4388 aa8.29□□□□□ -1.08
TRAFD1-209ENST00000552896 DNAH6Q9C0G6 4158 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 SCO2A0A1W2PP80 73 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 S100A9P06702 114 aaKnown RBP8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 HTN3P15516 51 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 ZNF80P51504 273 aaPredicted RBP8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 TMEM183BQ1AE95 376 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 Q6ZTI0 123 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 COX8CQ7Z4L0 72 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 TMEM183AQ8IXX5 376 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 C11orf52Q96A22 123 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 C18orf15Q96N68 181 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 NDUFAF3Q9BU61 184 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 SDF2L1Q9HCN8 221 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 APLNQ9ULZ1 77 aa8.28□□□□□ -1.08
TRAFD1-209ENST00000552896 GAGE12BA1L429 117 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 SPINK4O60575 86 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 GAGE7O76087 117 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 TYMSP04818 313 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 GAGE12FP0CL80 117 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 GAGE12GP0CL81 117 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 GAGE12IP0CL82 117 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 BCL2P10415 239 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 TAGLN2P37802 199 aaKnown RBP8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 BLOC1S1P78537 153 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 MEF2BQ02080 365 aaPredicted RBP8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 LGALS9BQ3B8N2 356 aa8.27□□□□□ -1.09
TRAFD1-209ENST00000552896 TRGV1A0A0A0MS02 117 aa8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 IGHV3-16A0A0C4DH30 117 aa8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 LGALS9CQ6DKI2 356 aa8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 ZC2HC1AQ96GY0 325 aa8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 SPXQ9BT56 116 aa8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 MDFICQ9P1T7 246 aa8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 C11orf21Q9P2W6 132 aa8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 TMA7Q9Y2S6 64 aaKnown RBP8.26□□□□□ -1.09
TRAFD1-209ENST00000552896 TRGV2A0A075B6R0 118 aa8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 F5H768 121 aa8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 PDE6DO43924 150 aa8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 FAM162BQ5T6X4 162 aa8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 TMEM88Q6PEY1 159 aa8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 C15orf53Q8NAA6 179 aa8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 LYPD6BQ8NI32 183 aa8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 MRPL16Q9NX20 251 aaKnown RBP8.25□□□□□ -1.09
TRAFD1-209ENST00000552896 FABP5P3A8MUU1 101 aa8.24□□□□□ -1.09
TRAFD1-209ENST00000552896 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
TRAFD1-209ENST00000552896 ZNF674Q2M3X9 581 aa8.24□□□□□ -1.09
TRAFD1-209ENST00000552896 VAX2Q9UIW0 290 aa8.24□□□□□ -1.09
TRAFD1-209ENST00000552896 M0R2P5 195 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 GNRH2O43555 120 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 SH2D1AO60880 128 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 LY6G6CO95867 125 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 RASL10AQ92737 203 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 C9orf85Q96MD7 179 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 DERL1Q9BUN8 251 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 MLST8Q9BVC4 326 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 KMT2AQ03164 3969 aa8.23□□□□□ -1.09
TRAFD1-209ENST00000552896 IGKV3D-20A0A0C4DH25 116 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 B4DEV8 164 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 P0DMU3 169 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 FAM231AP0DMU4 169 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 FAM231CP0DMU5 169 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 HOXA5P20719 270 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 CRIP1P50238 77 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 BAGE2Q86Y30 109 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 NHLRC2Q8NBF2 726 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 SMIM12Q96EX1 92 aa8.22□□□□□ -1.09
TRAFD1-209ENST00000552896 H3BNG1 76 aa8.21□□□□□ -1.1
TRAFD1-209ENST00000552896 ASIPP42127 132 aa8.21□□□□□ -1.1
TRAFD1-209ENST00000552896 CENPWQ5EE01 88 aa8.21□□□□□ -1.1
TRAFD1-209ENST00000552896 DNLZQ5SXM8 178 aa8.21□□□□□ -1.1
TRAFD1-209ENST00000552896 TRAV26-1A0A087WT03 109 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 TRAV4A0A0B4J268 109 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 KRBOX1C9JBD0 128 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 ORM1P02763 201 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 RNASE3P12724 160 aaKnown RBP8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 GNG4P50150 75 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 OR5I1Q13606 314 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 ZNF506Q5JVG8 444 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 TEX261Q6UWH6 196 aa8.2□□□□□ -1.1
TRAFD1-209ENST00000552896 PTH2Q96A98 100 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms