RNA–Protein interactions for RNA: ENST00000552180.5

GPN3-210, Transcript of GPN-loop GTPase 3, humanhuman

TSL 3

Gene GPN3, Length 640 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPN3-210ENST00000552180 PEX7O00628 323 aa13.54□□□□□ -0.24
GPN3-210ENST00000552180 IFNA7P01567 189 aa13.54□□□□□ -0.24
GPN3-210ENST00000552180 TPT1P13693 172 aaKnown RBP13.54□□□□□ -0.24
GPN3-210ENST00000552180 DPPA3Q6W0C5 159 aa13.54□□□□□ -0.24
GPN3-210ENST00000552180 SFT2D1Q8WV19 159 aa13.54□□□□□ -0.24
GPN3-210ENST00000552180 MRPL16Q9NX20 251 aaKnown RBP13.54□□□□□ -0.24
GPN3-210ENST00000552180 TRGV11A0A075B6L2 103 aa13.53□□□□□ -0.24
GPN3-210ENST00000552180 IGHV3-16A0A0C4DH30 117 aa13.53□□□□□ -0.24
GPN3-210ENST00000552180 NUDT3O95989 172 aa13.53□□□□□ -0.24
GPN3-210ENST00000552180 HIST1H2BAQ96A08 127 aa13.53□□□□□ -0.24
GPN3-210ENST00000552180 SPXQ9BT56 116 aa13.53□□□□□ -0.24
GPN3-210ENST00000552180 NAGKQ9UJ70 344 aa13.53□□□□□ -0.24
GPN3-210ENST00000552180 GCGP01275 180 aa13.52□□□□□ -0.25
GPN3-210ENST00000552180 SMUG1Q53HV7 270 aa13.52□□□□□ -0.25
GPN3-210ENST00000552180 SAPCD1Q5SSQ6 148 aa13.52□□□□□ -0.25
GPN3-210ENST00000552180 RASL10AQ92737 203 aa13.52□□□□□ -0.25
GPN3-210ENST00000552180 ARL2-SNX15V9GYD0 113 aa13.52□□□□□ -0.25
GPN3-210ENST00000552180 NACAE9PAV3 2078 aa13.52□□□□□ -0.25
GPN3-210ENST00000552180 H3BNG1 76 aa13.51□□□□□ -0.25
GPN3-210ENST00000552180 TYMSP04818 313 aa13.51□□□□□ -0.25
GPN3-210ENST00000552180 VSIG2Q96IQ7 327 aa13.51□□□□□ -0.25
GPN3-210ENST00000552180 KCNS1Q96KK3 526 aa13.51□□□□□ -0.25
GPN3-210ENST00000552180 HECTD4Q9Y4D8 3996 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 hCG_2014768A0A024R1R8 64 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 A0A0J9YY99 117 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 PAGE4O60829 102 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 PFN1P07737 140 aaKnown RBP13.5□□□□□ -0.25
GPN3-210ENST00000552180 H2AFB1P0C5Y9 115 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 UBE2DNLQ8IWF7 75 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 TCEAL7Q9BRU2 100 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 SDF2L1Q9HCN8 221 aa13.5□□□□□ -0.25
GPN3-210ENST00000552180 PPT1P50897 306 aa13.49□□□□□ -0.25
GPN3-210ENST00000552180 CST9LP1Q5W188 147 aa13.49□□□□□ -0.25
GPN3-210ENST00000552180 COX8CQ7Z4L0 72 aa13.49□□□□□ -0.25
GPN3-210ENST00000552180 Q86TA4 180 aa13.49□□□□□ -0.25
GPN3-210ENST00000552180 AKAP14Q86UN6 197 aa13.49□□□□□ -0.25
GPN3-210ENST00000552180 A0A1B0GV50 99 aa13.48□□□□□ -0.25
GPN3-210ENST00000552180 FAM3BP58499 235 aaPredicted RBP13.48□□□□□ -0.25
GPN3-210ENST00000552180 FHL2Q14192 279 aa13.48□□□□□ -0.25
GPN3-210ENST00000552180 ZFP69Q49AA0 526 aa13.48□□□□□ -0.25
GPN3-210ENST00000552180 TRBV6-1A0A0K0K1D8 114 aa13.47□□□□□ -0.25
GPN3-210ENST00000552180 M0R2P5 195 aa13.47□□□□□ -0.25
GPN3-210ENST00000552180 IGHV3-53P01767 116 aa13.47□□□□□ -0.25
GPN3-210ENST00000552180 SLC51BQ86UW2 128 aa13.47□□□□□ -0.25
GPN3-210ENST00000552180 LINC00588Q9Y4M8 146 aa13.47□□□□□ -0.25
GPN3-210ENST00000552180 TRAV1-1A0A0B4J248 108 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 CRIP1P50238 77 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 RAB5CP51148 216 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 CCL20P78556 96 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 EIF5AL1Q6IS14 154 aaKnown RBP13.46□□□□□ -0.25
GPN3-210ENST00000552180 Q6ZR54 194 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 C9orf62Q8N4C0 152 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 FMC1Q96HJ9 113 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 ZNF479Q96JC4 524 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 ZFP30Q9Y2G7 519 aa13.46□□□□□ -0.25
GPN3-210ENST00000552180 IGKV3D-20A0A0C4DH25 116 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 FABP5P3A8MUU1 101 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 M0R2N4 97 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 SULT1A2P50226 295 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 CCL18P55774 89 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 ZNRF2Q8NHG8 242 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 ZC2HC1AQ96GY0 325 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 PRO0255Q9UI72 69 aa13.45□□□□□ -0.26
GPN3-210ENST00000552180 IGLV2-18A0A075B6J9 118 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 A0A096LPF7 62 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 A0A1B0GVG6 124 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 LTAP01374 205 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 SFTA3P0C7M3 94 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 CRYBA4P53673 196 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 ESRGQ1W209 222 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 C9orf85Q96MD7 179 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 HHLA3Q9XRX5 114 aa13.44□□□□□ -0.26
GPN3-210ENST00000552180 RNASE3P12724 160 aaKnown RBP13.43□□□□□ -0.26
GPN3-210ENST00000552180 SLAQ13239 276 aa13.43□□□□□ -0.26
GPN3-210ENST00000552180 ZNF575Q86XF7 245 aa13.43□□□□□ -0.26
GPN3-210ENST00000552180 TRAV4A0A0B4J268 109 aa13.42□□□□□ -0.26
GPN3-210ENST00000552180 SCO2A0A1W2PP80 73 aa13.42□□□□□ -0.26
GPN3-210ENST00000552180 PAX4O43316 350 aa13.42□□□□□ -0.26
GPN3-210ENST00000552180 UBE2G1P62253 170 aa13.42□□□□□ -0.26
GPN3-210ENST00000552180 PTH2Q96A98 100 aa13.42□□□□□ -0.26
GPN3-210ENST00000552180 AKR1C3P42330 323 aa13.41□□□□□ -0.26
GPN3-210ENST00000552180 TRGV4A0A0C4DH28 118 aa13.4□□□□□ -0.26
GPN3-210ENST00000552180 SH2D1AO60880 128 aa13.4□□□□□ -0.26
GPN3-210ENST00000552180 S100A9P06702 114 aaKnown RBP13.4□□□□□ -0.26
GPN3-210ENST00000552180 ZNF674Q2M3X9 581 aa13.4□□□□□ -0.26
GPN3-210ENST00000552180 ZNF876PQ49A33 203 aa13.4□□□□□ -0.26
GPN3-210ENST00000552180 OR4C5Q8NGB2 326 aa13.4□□□□□ -0.26
GPN3-210ENST00000552180 MANBALQ9NQG1 85 aa13.4□□□□□ -0.26
GPN3-210ENST00000552180 PKD1P98161 4303 aa13.4□□□□□ -0.26
GPN3-210ENST00000552180 PGPEP1LA6NFU8 196 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 KRBOX1C9JBD0 128 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 C9JCJ5 164 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 RTL8CO15255 209 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 DNLZQ5SXM8 178 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 FAM162BQ5T6X4 162 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 MLST8Q9BVC4 326 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 GNG13Q9P2W3 67 aa13.39□□□□□ -0.27
GPN3-210ENST00000552180 ORM1P02763 201 aa13.38□□□□□ -0.27
GPN3-210ENST00000552180 UPK3BQ9BT76 320 aa13.38□□□□□ -0.27
GPN3-210ENST00000552180 ICOSQ9Y6W8 199 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 121 ms