RNA–Protein interactions for RNA: ENST00000552003.1

SLC48A1-209, Transcript of solute carrier family 48 member 1, humanhuman

TSL 3

Gene SLC48A1, Length 882 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC48A1-209ENST00000552003 MANBALQ9NQG1 85 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 ARL2-SNX15V9GYD0 113 aa6.88□□□□□ -1.31
SLC48A1-209ENST00000552003 A0A0J9YY99 117 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 CBY3A6NI87 242 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 H3BTX0 84 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 SLC17A3O00476 420 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 SOCS3O14543 225 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 SNRPCP09234 159 aaKnown RBP6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 TAGLN2P37802 199 aaKnown RBP6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 LYPD6BQ8NI32 183 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 NKX6-2Q9C056 277 aaPredicted RBP6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 TMPRSS5Q9H3S3 457 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 ZNF331Q9NQX6 463 aaPredicted RBP6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 PRELID1Q9Y255 219 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 GOLT1BQ9Y3E0 138 aa6.87□□□□□ -1.31
SLC48A1-209ENST00000552003 A0A1W2PRE2 83 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 LRCOL1A6NCL2 159 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 F6UB75 175 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 NDUFB4O95168 129 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 NMBP08949 121 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 HOXA5P20719 270 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 UBE2G2P60604 165 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 RANP62826 216 aaKnown RBP6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 CLLU1Q5K131 121 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 LELP1Q5T871 98 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 RXFP4Q8TDU9 374 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 MRPL53Q96EL3 112 aaKnown RBP6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 SAV1Q9H4B6 383 aaPredicted RBP6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 OTORQ9NRC9 128 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 GNG13Q9P2W3 67 aa6.86□□□□□ -1.31
SLC48A1-209ENST00000552003 TRAV8-2A0A0B4J237 113 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 FAM74A7A6NL05 159 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 CSN1S1P47710 185 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 CCL20P78556 96 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 PSG3Q16557 428 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 ZNF738Q8NE65 137 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 OR4B1Q8NGF8 309 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 CMTM2Q8TAZ6 248 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 PCNPQ8WW12 178 aaKnown RBP6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 LINC00052Q96N35 136 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 TXNDC17Q9BRA2 123 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 TCEAL7Q9BRU2 100 aa6.85□□□□□ -1.31
SLC48A1-209ENST00000552003 PGPA6NDG6 321 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 GGTLC3B5MD39 225 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 SIVA1O15304 175 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 CRXO43186 299 aaPredicted RBP6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 PAGE4O60829 102 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 BCL2P10415 239 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 OR5I1Q13606 314 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 CST9LP1Q5W188 147 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 EXOC3-AS1Q8N2X6 119 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 RNF182Q8N6D2 247 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 ARL6IP6Q8N6S5 226 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 C5orf17Q8NAS9 161 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 C20orf173Q96LM9 149 aa6.84□□□□□ -1.31
SLC48A1-209ENST00000552003 A0A096LPF7 62 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 SERTM2A0A1B0GWG4 89 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 RBFOX3A6NFN3 312 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 K7EQM0 130 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 SLC25A5P05141 298 aaKnown RBP6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 MEF2BQ02080 365 aaPredicted RBP6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 IGFL4Q6B9Z1 124 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 AMTNQ6UX39 209 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 SCXQ7RTU7 201 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 RPUSD4Q96CM3 377 aaKnown RBP6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 DAZAP1Q96EP5 407 aaKnown RBP6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 VAX2Q9UIW0 290 aa6.83□□□□□ -1.32
SLC48A1-209ENST00000552003 F6UZH7 168 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 M0R3E3 92 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 PDE6DO43924 150 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 CT83Q5H943 113 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 ZNF506Q5JVG8 444 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 EBLN2Q6P2I7 272 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 FOXI2Q6ZQN5 318 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 OR10J6PQ8NGY7 276 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 HIST1H2BAQ96A08 127 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 VSIG2Q96IQ7 327 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 FAM210AQ96ND0 272 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 EIF5A2Q9GZV4 153 aaKnown RBP6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 RPH3ALQ9UNE2 315 aa6.82□□□□□ -1.32
SLC48A1-209ENST00000552003 RBAKDNA6NC62 111 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 DIRC3C9JPN6 131 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 PEX7O00628 323 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 NDUFS6O75380 124 aaKnown RBP6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 DUSP14O95147 198 aaKnown RBP6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 TCRAP04437 139 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 TSPOP30536 169 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 NFE4Q86UQ8 179 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 CCDC28AQ8IWP9 274 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 CYB561D1Q8N8Q1 229 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 OR8A1Q8NGG7 326 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 NTN5Q8WTR8 489 aaPredicted RBP6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 IGF2BP2-AS1Q96M15 143 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 CDIP1Q9H305 208 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 EPDR1Q9UM22 224 aa6.81□□□□□ -1.32
SLC48A1-209ENST00000552003 A0A0J9YX75 114 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 RAB19A4D1S5 217 aa6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 FBLL1A6NHQ2 334 aaKnown RBP6.8□□□□□ -1.32
SLC48A1-209ENST00000552003 A8MTW9 85 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms