RNA–Protein interactions for RNA: ENST00000551845.5

PTCH1-225, Transcript of patched 1, humanhuman

TSL 5

Gene PTCH1, Length 809 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-225ENST00000551845 IFNA1P01562 189 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 HTN3P15516 51 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 AKR1C3P42330 323 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 TMEM183BQ1AE95 376 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 C11orf72Q8NBR9 251 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 C8orf49Q96NF6 230 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 NAGKQ9UJ70 344 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 TP53TG3Q9ULZ0 132 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 KLF12Q9Y4X4 402 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 HERC2O95714 4834 aa7.54□□□□□ -1.2
PTCH1-225ENST00000551845 PLECQ15149 4684 aaKnown RBP7.54□□□□□ -1.2
PTCH1-225ENST00000551845 TRBV6-1A0A0K0K1D8 114 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 GAGE12BA1L429 117 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 GNRH2O43555 120 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 GAGE7O76087 117 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 ATP5G1P05496 136 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 PFN1P07737 140 aaKnown RBP7.53□□□□□ -1.2
PTCH1-225ENST00000551845 GAGE12FP0CL80 117 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 GAGE12GP0CL81 117 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 GAGE12IP0CL82 117 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 TCL1AP56279 114 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 ZNF415Q09FC8 603 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 TDRG1Q3Y452 100 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 TMEM183AQ8IXX5 376 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 FAM210BQ96KR6 192 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 SDF2L1Q9HCN8 221 aa7.53□□□□□ -1.2
PTCH1-225ENST00000551845 IGHV4-4A0A075B6R2 117 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 TRGV1A0A0A0MS02 117 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 F5H768 121 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 SPINK4O60575 86 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 TAGLN2P37802 199 aaKnown RBP7.52□□□□□ -1.21
PTCH1-225ENST00000551845 ZNF80P51504 273 aaPredicted RBP7.52□□□□□ -1.21
PTCH1-225ENST00000551845 LGALS9BQ3B8N2 356 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 BAGE2Q86Y30 109 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 LINC00612Q8N6U2 182 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 SPXQ9BT56 116 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 NDUFAF3Q9BU61 184 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 MDFICQ9P1T7 246 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 APLNQ9ULZ1 77 aa7.52□□□□□ -1.21
PTCH1-225ENST00000551845 TRGV2A0A075B6R0 118 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 SCO2A0A1W2PP80 73 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 LY6G6CO95867 125 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 LTAP01374 205 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 Q6ZTI0 123 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 COX8CQ7Z4L0 72 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 Q86TA4 180 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 VAX2Q9UIW0 290 aa7.51□□□□□ -1.21
PTCH1-225ENST00000551845 IGHV3-16A0A0C4DH30 117 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 PDE6DO43924 150 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 ORM1P02763 201 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 TYMSP04818 313 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 MEF2BQ02080 365 aaPredicted RBP7.5□□□□□ -1.21
PTCH1-225ENST00000551845 OR5I1Q13606 314 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 LINC00476Q8WZB0 136 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 C18orf15Q96N68 181 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 MED9Q9NWA0 146 aa7.5□□□□□ -1.21
PTCH1-225ENST00000551845 BCL2P10415 239 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 CRIP1P50238 77 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 FAM162BQ5T6X4 162 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 LGALS9CQ6DKI2 356 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 LYPD6BQ8NI32 183 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 RASL10AQ92737 203 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 ZC2HC1AQ96GY0 325 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 C11orf21Q9P2W6 132 aa7.49□□□□□ -1.21
PTCH1-225ENST00000551845 IGKV3D-20A0A0C4DH25 116 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 RBFOX3A6NFN3 312 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 M0R2P5 195 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 S100A4P26447 101 aaKnown RBP7.48□□□□□ -1.21
PTCH1-225ENST00000551845 RPL35P42766 123 aaKnown RBP7.48□□□□□ -1.21
PTCH1-225ENST00000551845 ZNF674Q2M3X9 581 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 LCE2AQ5TA79 106 aaPredicted RBP7.48□□□□□ -1.21
PTCH1-225ENST00000551845 TMEM88Q6PEY1 159 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 C15orf53Q8NAA6 179 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 C11orf52Q96A22 123 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 MRPL16Q9NX20 251 aaKnown RBP7.48□□□□□ -1.21
PTCH1-225ENST00000551845 FRAS1Q86XX4 4008 aa7.48□□□□□ -1.21
PTCH1-225ENST00000551845 B4DEV8 164 aa7.47□□□□□ -1.21
PTCH1-225ENST00000551845 SH2D1AO60880 128 aa7.47□□□□□ -1.21
PTCH1-225ENST00000551845 SLAQ13239 276 aa7.47□□□□□ -1.21
PTCH1-225ENST00000551845 TEX261Q6UWH6 196 aa7.47□□□□□ -1.21
PTCH1-225ENST00000551845 NHLRC2Q8NBF2 726 aa7.47□□□□□ -1.21
PTCH1-225ENST00000551845 MLST8Q9BVC4 326 aa7.47□□□□□ -1.21
PTCH1-225ENST00000551845 TMA7Q9Y2S6 64 aaKnown RBP7.47□□□□□ -1.21
PTCH1-225ENST00000551845 RAB19A4D1S5 217 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 KRBOX1C9JBD0 128 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 C9JCJ5 164 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 M0R036 132 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 P0DMU3 169 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 FAM231AP0DMU4 169 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 FAM231CP0DMU5 169 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 ASIPP42127 132 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 GNG4P50150 75 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 ZNF876PQ49A33 203 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 DAZAP1Q96EP5 407 aaKnown RBP7.46□□□□□ -1.22
PTCH1-225ENST00000551845 DERL1Q9BUN8 251 aa7.46□□□□□ -1.22
PTCH1-225ENST00000551845 EIF5A2Q9GZV4 153 aaKnown RBP7.46□□□□□ -1.22
PTCH1-225ENST00000551845 TRAV26-1A0A087WT03 109 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 NUDT3O95989 172 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 IGHV3-53P01767 116 aa7.45□□□□□ -1.22
PTCH1-225ENST00000551845 RNASE3P12724 160 aaKnown RBP7.45□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms