RNA–Protein interactions for RNA: ENST00000551706.1

CDK4-208, Transcript of cyclin dependent kinase 4, humanhuman

TSL 1 (best)

Gene CDK4, Length 984 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK4-208ENST00000551706 C8orf49Q96NF6 230 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 TXNDC17Q9BRA2 123 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 GNG13Q9P2W3 67 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 NAGKQ9UJ70 344 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 ZFP30Q9Y2G7 519 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 KLF12Q9Y4X4 402 aa12.27□□□□□ -0.45
CDK4-208ENST00000551706 TRBV6-1A0A0K0K1D8 114 aa12.26□□□□□ -0.45
CDK4-208ENST00000551706 S100A9P06702 114 aaKnown RBP12.26□□□□□ -0.45
CDK4-208ENST00000551706 PFN1P07737 140 aaKnown RBP12.26□□□□□ -0.45
CDK4-208ENST00000551706 AKR1C3P42330 323 aa12.26□□□□□ -0.45
CDK4-208ENST00000551706 Q86TA4 180 aa12.26□□□□□ -0.45
CDK4-208ENST00000551706 TP53TG3Q9ULZ0 132 aa12.26□□□□□ -0.45
CDK4-208ENST00000551706 IFNA1P01562 189 aa12.25□□□□□ -0.45
CDK4-208ENST00000551706 CCL20P78556 96 aa12.25□□□□□ -0.45
CDK4-208ENST00000551706 TMEM183BQ1AE95 376 aa12.25□□□□□ -0.45
CDK4-208ENST00000551706 LGALS9BQ3B8N2 356 aa12.25□□□□□ -0.45
CDK4-208ENST00000551706 NDUFAF3Q9BU61 184 aa12.25□□□□□ -0.45
CDK4-208ENST00000551706 SDF2L1Q9HCN8 221 aa12.25□□□□□ -0.45
CDK4-208ENST00000551706 APLNQ9ULZ1 77 aa12.25□□□□□ -0.45
CDK4-208ENST00000551706 GAGE12BA1L429 117 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 SPINK4O60575 86 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 GAGE7O76087 117 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 GAGE12FP0CL80 117 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 GAGE12GP0CL81 117 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 GAGE12IP0CL82 117 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 ZNF80P51504 273 aaPredicted RBP12.24□□□□□ -0.45
CDK4-208ENST00000551706 ALKAL2Q6UX46 152 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 TMEM183AQ8IXX5 376 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 C18orf15Q96N68 181 aa12.24□□□□□ -0.45
CDK4-208ENST00000551706 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
CDK4-208ENST00000551706 SCO2A0A1W2PP80 73 aa12.23□□□□□ -0.45
CDK4-208ENST00000551706 TAGLN2P37802 199 aaKnown RBP12.23□□□□□ -0.45
CDK4-208ENST00000551706 BLOC1S1P78537 153 aa12.23□□□□□ -0.45
CDK4-208ENST00000551706 LGALS9CQ6DKI2 356 aa12.23□□□□□ -0.45
CDK4-208ENST00000551706 Q6ZTI0 123 aa12.23□□□□□ -0.45
CDK4-208ENST00000551706 COX8CQ7Z4L0 72 aa12.23□□□□□ -0.45
CDK4-208ENST00000551706 SPXQ9BT56 116 aa12.23□□□□□ -0.45
CDK4-208ENST00000551706 TRGV2A0A075B6R0 118 aa12.22□□□□□ -0.45
CDK4-208ENST00000551706 FABP5P3A8MUU1 101 aa12.22□□□□□ -0.45
CDK4-208ENST00000551706 F5H768 121 aa12.22□□□□□ -0.45
CDK4-208ENST00000551706 LTAP01374 205 aa12.22□□□□□ -0.45
CDK4-208ENST00000551706 MDFICQ9P1T7 246 aa12.22□□□□□ -0.45
CDK4-208ENST00000551706 TYMSP04818 313 aa12.21□□□□□ -0.45
CDK4-208ENST00000551706 TMEM88Q6PEY1 159 aa12.21□□□□□ -0.45
CDK4-208ENST00000551706 IGHV3-16A0A0C4DH30 117 aa12.2□□□□□ -0.46
CDK4-208ENST00000551706 GNRH2O43555 120 aa12.2□□□□□ -0.46
CDK4-208ENST00000551706 PDE6DO43924 150 aa12.2□□□□□ -0.46
CDK4-208ENST00000551706 MEF2BQ02080 365 aaPredicted RBP12.2□□□□□ -0.46
CDK4-208ENST00000551706 TEX261Q6UWH6 196 aa12.2□□□□□ -0.46
CDK4-208ENST00000551706 C15orf53Q8NAA6 179 aa12.2□□□□□ -0.46
CDK4-208ENST00000551706 C11orf52Q96A22 123 aa12.2□□□□□ -0.46
CDK4-208ENST00000551706 ABCA13Q86UQ4 5058 aa12.19□□□□□ -0.46
CDK4-208ENST00000551706 BCL2P10415 239 aa12.19□□□□□ -0.46
CDK4-208ENST00000551706 FAM162BQ5T6X4 162 aa12.19□□□□□ -0.46
CDK4-208ENST00000551706 ZC2HC1AQ96GY0 325 aa12.19□□□□□ -0.46
CDK4-208ENST00000551706 C11orf21Q9P2W6 132 aa12.19□□□□□ -0.46
CDK4-208ENST00000551706 VAX2Q9UIW0 290 aa12.19□□□□□ -0.46
CDK4-208ENST00000551706 IFITM2Q01629 132 aa12.18□□□□□ -0.46
CDK4-208ENST00000551706 BAGE2Q86Y30 109 aa12.18□□□□□ -0.46
CDK4-208ENST00000551706 RASL10AQ92737 203 aa12.18□□□□□ -0.46
CDK4-208ENST00000551706 MRPL16Q9NX20 251 aaKnown RBP12.18□□□□□ -0.46
CDK4-208ENST00000551706 M0R2P5 195 aa12.17□□□□□ -0.46
CDK4-208ENST00000551706 P0DMU3 169 aa12.17□□□□□ -0.46
CDK4-208ENST00000551706 FAM231AP0DMU4 169 aa12.17□□□□□ -0.46
CDK4-208ENST00000551706 FAM231CP0DMU5 169 aa12.17□□□□□ -0.46
CDK4-208ENST00000551706 RPL35P42766 123 aaKnown RBP12.17□□□□□ -0.46
CDK4-208ENST00000551706 OR5I1Q13606 314 aa12.17□□□□□ -0.46
CDK4-208ENST00000551706 ZNF674Q2M3X9 581 aa12.17□□□□□ -0.46
CDK4-208ENST00000551706 LYPD6BQ8NI32 183 aa12.17□□□□□ -0.46
CDK4-208ENST00000551706 SH2D1AO60880 128 aa12.16□□□□□ -0.46
CDK4-208ENST00000551706 ORM1P02763 201 aa12.16□□□□□ -0.46
CDK4-208ENST00000551706 CRIP1P50238 77 aa12.16□□□□□ -0.46
CDK4-208ENST00000551706 RAB14P61106 215 aa12.16□□□□□ -0.46
CDK4-208ENST00000551706 MLST8Q9BVC4 326 aa12.16□□□□□ -0.46
CDK4-208ENST00000551706 IGKV3D-20A0A0C4DH25 116 aa12.15□□□□□ -0.46
CDK4-208ENST00000551706 HOXA5P20719 270 aa12.15□□□□□ -0.46
CDK4-208ENST00000551706 TRAV26-1A0A087WT03 109 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 B4DEV8 164 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 H3BNG1 76 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 S100A4P26447 101 aaKnown RBP12.14□□□□□ -0.47
CDK4-208ENST00000551706 ASIPP42127 132 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 SLAQ13239 276 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 NHLRC2Q8NBF2 726 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 SMIM12Q96EX1 92 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 C9orf85Q96MD7 179 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 MED9Q9NWA0 146 aa12.14□□□□□ -0.47
CDK4-208ENST00000551706 KRBOX1C9JBD0 128 aa12.13□□□□□ -0.47
CDK4-208ENST00000551706 RNASE3P12724 160 aaKnown RBP12.13□□□□□ -0.47
CDK4-208ENST00000551706 LINC01559Q495D7 138 aa12.13□□□□□ -0.47
CDK4-208ENST00000551706 PTH2Q96A98 100 aa12.13□□□□□ -0.47
CDK4-208ENST00000551706 DERL1Q9BUN8 251 aa12.13□□□□□ -0.47
CDK4-208ENST00000551706 TRAV4A0A0B4J268 109 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 RBFOX3A6NFN3 312 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 M0R036 132 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 NUDT3O95989 172 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 ZNF876PQ49A33 203 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 CENPWQ5EE01 88 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 DNLZQ5SXM8 178 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 IL36BQ9NZH7 164 aa12.12□□□□□ -0.47
CDK4-208ENST00000551706 IGHV3-53P01767 116 aa12.11□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms