RNA–Protein interactions for RNA: ENST00000551655.1

VPS29-209, Transcript of VPS29, retromer complex component, humanhuman

TSL 5

Gene VPS29, Length 766 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS29-209ENST00000551655 HLA-DQA1P01909 254 aa9.1□□□□□ -0.95
VPS29-209ENST00000551655 RAB31Q13636 194 aa9.1□□□□□ -0.95
VPS29-209ENST00000551655 PDE6HQ13956 83 aa9.1□□□□□ -0.95
VPS29-209ENST00000551655 ZNF876PQ49A33 203 aa9.1□□□□□ -0.95
VPS29-209ENST00000551655 OR1L4Q8NGR5 311 aa9.1□□□□□ -0.95
VPS29-209ENST00000551655 AP3S1Q92572 193 aa9.1□□□□□ -0.95
VPS29-209ENST00000551655 A0A087WYN8 130 aa9.09□□□□□ -0.95
VPS29-209ENST00000551655 TRBV7-9A0A0J9YWB2 115 aa9.09□□□□□ -0.95
VPS29-209ENST00000551655 CTDSP2O14595 271 aa9.09□□□□□ -0.95
VPS29-209ENST00000551655 SCGB1D2O95969 90 aa9.09□□□□□ -0.95
VPS29-209ENST00000551655 CIRBPQ14011 172 aaKnown RBP9.09□□□□□ -0.95
VPS29-209ENST00000551655 IL18Q14116 193 aa9.09□□□□□ -0.95
VPS29-209ENST00000551655 CYB561D1Q8N8Q1 229 aa9.09□□□□□ -0.95
VPS29-209ENST00000551655 SAMD10Q9BYL1 202 aa9.09□□□□□ -0.95
VPS29-209ENST00000551655 NAA50Q9GZZ1 169 aaKnown RBP9.09□□□□□ -0.95
VPS29-209ENST00000551655 GPN1Q9HCN4 374 aaPredicted RBP9.09□□□□□ -0.95
VPS29-209ENST00000551655 RGS5O15539 181 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 GCSAMLQ5JQS6 135 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 PHYHIPLQ96FC7 376 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 DPH3Q96FX2 82 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 PFDN5Q99471 154 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 C1orf43Q9BWL3 253 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 SLC25A2Q9BXI2 301 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 SLC39A9Q9NUM3 307 aa9.08□□□□□ -0.96
VPS29-209ENST00000551655 MGST1P10620 155 aaKnown RBP9.07□□□□□ -0.96
VPS29-209ENST00000551655 INPP1P49441 399 aa9.07□□□□□ -0.96
VPS29-209ENST00000551655 DGAT2L7PQ6IED9 249 aa9.07□□□□□ -0.96
VPS29-209ENST00000551655 ENHOQ6UWT2 76 aa9.07□□□□□ -0.96
VPS29-209ENST00000551655 C12orf45Q8N5I9 185 aaPredicted RBP9.07□□□□□ -0.96
VPS29-209ENST00000551655 Q9H521 79 aa9.07□□□□□ -0.96
VPS29-209ENST00000551655 FSIP2Q5CZC0 6907 aa9.07□□□□□ -0.96
VPS29-209ENST00000551655 F6UZH7 168 aa9.06□□□□□ -0.96
VPS29-209ENST00000551655 CTDSPLO15194 276 aa9.06□□□□□ -0.96
VPS29-209ENST00000551655 TSC22D2O75157 780 aa9.06□□□□□ -0.96
VPS29-209ENST00000551655 PRR3P79522 188 aaKnown RBP9.06□□□□□ -0.96
VPS29-209ENST00000551655 OR2T35Q8NGX2 323 aa9.06□□□□□ -0.96
VPS29-209ENST00000551655 A0A087WWC5 75 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 A0A087WX48 190 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 A0A0U1RQV1 116 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 PGPEP1LA6NFU8 196 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 ZNF506Q5JVG8 444 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 XP32Q5T750 250 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 GGACTQ9BVM4 153 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 C20orf85Q9H1P6 137 aa9.05□□□□□ -0.96
VPS29-209ENST00000551655 NBEAP1P0C6P0 100 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 SEC11BP0C7V7 166 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 MIR17HGQ75NE6 70 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 C14orf178Q8N769 122 aaPredicted RBP9.04□□□□□ -0.96
VPS29-209ENST00000551655 SPACA4Q8TDM5 124 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 FAM167A-AS1Q96KT0 104 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 SH3BGRL3Q9H299 93 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 SDF2L1Q9HCN8 221 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 WDR83OSQ9Y284 106 aa9.04□□□□□ -0.96
VPS29-209ENST00000551655 UBE2L5PA0A1B0GUS4 154 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 C7orf66A4D0T2 115 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 CST7O76096 145 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 RPL19P84098 196 aaKnown RBP9.03□□□□□ -0.96
VPS29-209ENST00000551655 Q0VG73 95 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 MCFD2Q8NI22 146 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 C7orf33Q8WU49 177 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 FXYD5Q96DB9 178 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 DIRAS2Q96HU8 199 aa9.03□□□□□ -0.96
VPS29-209ENST00000551655 RBAKDNA6NC62 111 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 DIRC3C9JPN6 131 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 CIDEAO60543 219 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 RPL29P47914 159 aaKnown RBP9.02□□□□□ -0.97
VPS29-209ENST00000551655 TAS2R30P59541 319 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 CTF1Q16619 201 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 C15orf54Q8N8G6 183 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 GTSF1Q8WW33 167 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 ASB13Q8WXK3 278 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 TVP23CQ96ET8 276 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 ATP5SQ99766 215 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 PARLQ9H300 379 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 VCX3AQ9NNX9 186 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 C11orf21Q9P2W6 132 aa9.02□□□□□ -0.97
VPS29-209ENST00000551655 TRAV21A0A0B4J279 112 aa9.01□□□□□ -0.97
VPS29-209ENST00000551655 MUC21A0A0G2JKD1 596 aa9.01□□□□□ -0.97
VPS29-209ENST00000551655 RANP62826 216 aaKnown RBP9.01□□□□□ -0.97
VPS29-209ENST00000551655 BAXQ07812 192 aa9.01□□□□□ -0.97
VPS29-209ENST00000551655 ELOBQ15370 118 aa9.01□□□□□ -0.97
VPS29-209ENST00000551655 REG3GQ6UW15 175 aa9.01□□□□□ -0.97
VPS29-209ENST00000551655 OR10G9Q8NGN4 311 aa9.01□□□□□ -0.97
VPS29-209ENST00000551655 PLAC8Q9NZF1 115 aa9.01□□□□□ -0.97
VPS29-209ENST00000551655 PGPA6NDG6 321 aa9□□□□□ -0.97
VPS29-209ENST00000551655 CRPP02741 224 aa9□□□□□ -0.97
VPS29-209ENST00000551655 CSN1S1P47710 185 aa9□□□□□ -0.97
VPS29-209ENST00000551655 IAH1Q2TAA2 248 aaPredicted RBP9□□□□□ -0.97
VPS29-209ENST00000551655 TMEM75Q8N9X5 138 aa9□□□□□ -0.97
VPS29-209ENST00000551655 DYNC2LI1Q8TCX1 351 aa9□□□□□ -0.97
VPS29-209ENST00000551655 LINC00479Q96M42 142 aa9□□□□□ -0.97
VPS29-209ENST00000551655 C9orf85Q96MD7 179 aa9□□□□□ -0.97
VPS29-209ENST00000551655 JPT2Q9H910 190 aa9□□□□□ -0.97
VPS29-209ENST00000551655 UQCC1Q9NVA1 299 aa9□□□□□ -0.97
VPS29-209ENST00000551655 GSKIPQ9P0R6 139 aa9□□□□□ -0.97
VPS29-209ENST00000551655 LENEPQ9Y5L5 61 aa9□□□□□ -0.97
VPS29-209ENST00000551655 A0A087WXM4 84 aa8.99□□□□□ -0.97
VPS29-209ENST00000551655 C9orf170A2RU37 121 aa8.99□□□□□ -0.97
VPS29-209ENST00000551655 MBPP02686 304 aaPredicted RBP8.99□□□□□ -0.97
VPS29-209ENST00000551655 RNF185Q96GF1 192 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms