RNA–Protein interactions for RNA: ENST00000551338.1

RAB5C-208, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB5C, Length 560 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-208ENST00000551338 TMEM160Q9NX00 188 aa8.59□□□□□ -1.03
RAB5C-208ENST00000551338 SIGLEC8Q9NYZ4 499 aa8.59□□□□□ -1.03
RAB5C-208ENST00000551338 ASH1LQ9NR48 2969 aaKnown RBP8.59□□□□□ -1.03
RAB5C-208ENST00000551338 CREBBPQ92793 2442 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 GAS8-AS1O95177 125 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 IFI27P40305 119 aaPredicted RBP8.58□□□□□ -1.04
RAB5C-208ENST00000551338 LEPP41159 167 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 ASIPP42127 132 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 SNRPD3P62318 126 aaKnown RBP8.58□□□□□ -1.04
RAB5C-208ENST00000551338 TDRG1Q3Y452 100 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 FA2HQ7L5A8 372 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 SPATA12Q7Z6I5 190 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 OR9G4Q8NGQ1 327 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 WFDC12Q8WWY7 111 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 DLX4Q92988 240 aaPredicted RBP8.58□□□□□ -1.04
RAB5C-208ENST00000551338 C16orf95Q9H693 158 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 SCRT2Q9NQ03 307 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 PEMTQ9UBM1 199 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 ABCA12Q86UK0 2595 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 CRYBG3Q68DQ2 2970 aa8.58□□□□□ -1.04
RAB5C-208ENST00000551338 A0A096LNJ9 63 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 TRAV2A0A0B4J234 112 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 LOC389332A0A1B0GUA5 103 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 LEPROTL1O95214 131 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 PPBPP02775 128 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 CD28P10747 220 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 RNASE3P12724 160 aaKnown RBP8.57□□□□□ -1.04
RAB5C-208ENST00000551338 BTF3P20290 206 aaKnown RBP8.57□□□□□ -1.04
RAB5C-208ENST00000551338 EVI2AP22794 236 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 SPANXN1Q5VSR9 72 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 FOXI2Q6ZQN5 318 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 PRSS3P2Q8NHM4 247 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 C20orf144Q9BQM9 153 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 AP5S1Q9NUS5 200 aa8.57□□□□□ -1.04
RAB5C-208ENST00000551338 TIMM8BQ9Y5J9 83 aaPredicted RBP8.57□□□□□ -1.04
RAB5C-208ENST00000551338 ZFHX3Q15911 3703 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 C7orf71A4D174 169 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 A8MTW9 85 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 GNRH2O43555 120 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 SPRY2O43597 315 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 DUSP14O95147 198 aaKnown RBP8.56□□□□□ -1.04
RAB5C-208ENST00000551338 FHL3Q13643 280 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 AMTNQ6UX39 209 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 TMEM61Q8N0U2 210 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 LINC01006Q8NI28 216 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 RAX2Q96IS3 184 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 VAMP8Q9BV40 100 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 LAMTOR2Q9Y2Q5 125 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 CELSR1Q9NYQ6 3014 aa8.56□□□□□ -1.04
RAB5C-208ENST00000551338 ITPR3Q14573 2671 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 TRAV12-3A0A0B4J271 114 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 TCF21O43680 179 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 NXPH4O95158 308 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 IGKV3-20P01619 116 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 GATA1P15976 413 aaPredicted RBP8.55□□□□□ -1.04
RAB5C-208ENST00000551338 S100A4P26447 101 aaKnown RBP8.55□□□□□ -1.04
RAB5C-208ENST00000551338 HILS1P60008 231 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 CTAG1AP78358 180 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 C11orf44Q8N8P7 122 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 DYNLRB2Q8TF09 96 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 SMR3AQ99954 134 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 NDUFAF3Q9BU61 184 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 MAP1LC3AQ9H492 121 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 PAM16Q9Y3D7 125 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 APCP25054 2843 aa8.55□□□□□ -1.04
RAB5C-208ENST00000551338 PDZD2O15018 2839 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 LINC01546A6NGU7 62 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 SYS1-DBNDD2H3BUS1 97 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 M0R381 172 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 TNFRSF6BO95407 300 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 DEFB131AP59861 70 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 DEFA6Q01524 100 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 SCGB2A2Q13296 93 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 SPINK13Q1W4C9 94 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 SMIM15Q7Z3B0 74 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 NRACQ8N912 160 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 ZNF418Q8TF45 676 aaPredicted RBP8.54□□□□□ -1.04
RAB5C-208ENST00000551338 C14orf144Q96I85 54 aa8.54□□□□□ -1.04
RAB5C-208ENST00000551338 IGLV2-18A0A075B6J9 118 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 TRAV12-2A0A075B6T6 113 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 A0A1W2PRX2 142 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 RBMY1BA6NDE4 496 aaKnown RBP8.53□□□□□ -1.04
RAB5C-208ENST00000551338 RBMY1EA6NEQ0 496 aaKnown RBP8.53□□□□□ -1.04
RAB5C-208ENST00000551338 KNCNA6PVL3 124 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 CRXO43186 299 aaPredicted RBP8.53□□□□□ -1.04
RAB5C-208ENST00000551338 LY6G6DO95868 133 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 RBMY1DP0C7P1 496 aaKnown RBP8.53□□□□□ -1.04
RAB5C-208ENST00000551338 TSPOP30536 169 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 CDKN1BP46527 198 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 DEFB114Q30KQ6 69 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 FAM159AQ6UWV7 190 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 ATOH7Q8N100 152 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 OR2K2Q8NGT1 345 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 CITED2Q99967 270 aaPredicted RBP8.53□□□□□ -1.04
RAB5C-208ENST00000551338 ZNF747Q9BV97 191 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 MAP6D1Q9H9H5 199 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 HSPB8Q9UJY1 196 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 PHLDA3Q9Y5J5 127 aa8.53□□□□□ -1.04
RAB5C-208ENST00000551338 VPS13CQ709C8 3753 aa8.52□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms