RNA–Protein interactions for RNA: ENST00000550891.4

SCN8A-206, Transcript of sodium voltage-gated channel alpha subunit 8, humanhuman

TSL 1 (best)

Gene SCN8A, Length 3,253 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN8A-206ENST00000550891 AP5S1Q9NUS5 200 aa11.68□□□□□ -0.54
SCN8A-206ENST00000550891 MSRB1Q9NZV6 116 aa11.68□□□□□ -0.54
SCN8A-206ENST00000550891 IGKV3-20P01619 116 aa11.67□□□□□ -0.54
SCN8A-206ENST00000550891 CACNG7P62955 275 aa11.67□□□□□ -0.54
SCN8A-206ENST00000550891 MRPL51Q4U2R6 128 aaKnown RBP11.67□□□□□ -0.54
SCN8A-206ENST00000550891 OR9G4Q8NGQ1 327 aa11.67□□□□□ -0.54
SCN8A-206ENST00000550891 RAB4AP20338 218 aa11.67□□□□□ -0.54
SCN8A-206ENST00000550891 LOC389332A0A1B0GUA5 103 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 A0A1W2PRX2 142 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 LEPP41159 167 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 OR10AG1Q8NH19 301 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 HECTD1Q9ULT8 2610 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 PPBPP02775 128 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 OR5AL1P0C617 328 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 FAM159AQ6UWV7 190 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 Q6ZQT7 251 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 WFDC12Q8WWY7 111 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 PHLDA3Q9Y5J5 127 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 HIVEP2P31629 2446 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 LINC00587B1AMM8 73 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 DUSP14O95147 198 aaKnown RBP11.66□□□□□ -0.54
SCN8A-206ENST00000550891 PMCHL1Q16048 86 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 DMRTA1Q5VZB9 504 aa11.66□□□□□ -0.54
SCN8A-206ENST00000550891 LEPROTL1O95214 131 aa11.65□□□□□ -0.54
SCN8A-206ENST00000550891 C3orf79P0CE67 100 aa11.65□□□□□ -0.54
SCN8A-206ENST00000550891 TSPOP30536 169 aa11.65□□□□□ -0.54
SCN8A-206ENST00000550891 ANXA2RQ3ZCQ2 193 aa11.65□□□□□ -0.54
SCN8A-206ENST00000550891 MTORP42345 2549 aa11.65□□□□□ -0.54
SCN8A-206ENST00000550891 RNASE1P07998 156 aaKnown RBP11.65□□□□□ -0.54
SCN8A-206ENST00000550891 VAMP8Q9BV40 100 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 ZNF664Q8N3J9 261 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 IGHV1-24A0A0C4DH33 117 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 A0A0J9YX75 114 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 M0R381 172 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 NCR2O95944 276 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 DLX4Q92988 240 aaPredicted RBP11.64□□□□□ -0.55
SCN8A-206ENST00000550891 FAM19A4Q96LR4 140 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 JMJD8Q96S16 334 aa11.64□□□□□ -0.55
SCN8A-206ENST00000550891 PDZD2O15018 2839 aa11.63□□□□□ -0.55
SCN8A-206ENST00000550891 SMKR1H3BMG3 65 aa11.63□□□□□ -0.55
SCN8A-206ENST00000550891 BTF3P20290 206 aaKnown RBP11.63□□□□□ -0.55
SCN8A-206ENST00000550891 ZNF575Q86XF7 245 aa11.63□□□□□ -0.55
SCN8A-206ENST00000550891 URB1-AS1Q96HZ7 61 aa11.63□□□□□ -0.55
SCN8A-206ENST00000550891 GCN1Q92616 2671 aaKnown RBP11.63□□□□□ -0.55
SCN8A-206ENST00000550891 EVI2AP22794 236 aa11.63□□□□□ -0.55
SCN8A-206ENST00000550891 KIR3DS1Q14943 382 aa11.63□□□□□ -0.55
SCN8A-206ENST00000550891 MAP1LC3AQ9H492 121 aa11.63□□□□□ -0.55
SCN8A-206ENST00000550891 TRAV12-3A0A0B4J271 114 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 SNAI2O43623 268 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 HSPB8Q9UJY1 196 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 IFI27P40305 119 aaPredicted RBP11.62□□□□□ -0.55
SCN8A-206ENST00000550891 DEFA6Q01524 100 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 FOXI2Q6ZQN5 318 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 APRG1Q8IVJ8 170 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 U3KQK5 164 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 C7orf71A4D174 169 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 KLLNB2CW77 178 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 DDTP30046 118 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 HIST2H2BDQ6DRA6 164 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 ODF3Q96PU9 254 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 TMEM70Q9BUB7 260 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 TMEM160Q9NX00 188 aa11.62□□□□□ -0.55
SCN8A-206ENST00000550891 C20orf202A1L168 122 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 TCF21O43680 179 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 LINC01006Q8NI28 216 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 SMR3AQ99954 134 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 LAMTOR2Q9Y2Q5 125 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 PAM16Q9Y3D7 125 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 RNF114Q9Y508 228 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 CD28P10747 220 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 CDKN1BP46527 198 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 HILS1P60008 231 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 SIGLEC8Q9NYZ4 499 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 TSSC4Q9Y5U2 329 aaPredicted RBP11.61□□□□□ -0.55
SCN8A-206ENST00000550891 CCL24O00175 119 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 NPYP01303 97 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 DEFB131AP59861 70 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 TMEM61Q8N0U2 210 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 MAP1LC3CQ9BXW4 147 aa11.61□□□□□ -0.55
SCN8A-206ENST00000550891 NBPF19A0A087WUL8 3843 aa11.6□□□□□ -0.55
SCN8A-206ENST00000550891 GNRH2O43555 120 aa11.6□□□□□ -0.55
SCN8A-206ENST00000550891 CD7P09564 240 aa11.6□□□□□ -0.55
SCN8A-206ENST00000550891 SPINK13Q1W4C9 94 aa11.6□□□□□ -0.55
SCN8A-206ENST00000550891 ADAMTSL5Q6ZMM2 481 aa11.6□□□□□ -0.55
SCN8A-206ENST00000550891 TEX43Q6ZNM6 134 aa11.6□□□□□ -0.55
SCN8A-206ENST00000550891 SORL1Q92673 2214 aa11.6□□□□□ -0.55
SCN8A-206ENST00000550891 MED14OSP0DP75 135 aa11.59□□□□□ -0.55
SCN8A-206ENST00000550891 RNF185Q96GF1 192 aa11.59□□□□□ -0.55
SCN8A-206ENST00000550891 CITED2Q99967 270 aaPredicted RBP11.59□□□□□ -0.55
SCN8A-206ENST00000550891 IGHV4-4A0A075B6R2 117 aa11.59□□□□□ -0.55
SCN8A-206ENST00000550891 TRAV12-2A0A075B6T6 113 aa11.59□□□□□ -0.55
SCN8A-206ENST00000550891 OR4C46A6NHA9 309 aa11.59□□□□□ -0.55
SCN8A-206ENST00000550891 RAX2Q96IS3 184 aa11.59□□□□□ -0.55
SCN8A-206ENST00000550891 C16orf95Q9H693 158 aa11.59□□□□□ -0.55
SCN8A-206ENST00000550891 H0Y8G0 127 aa11.58□□□□□ -0.56
SCN8A-206ENST00000550891 TNFRSF6BO95407 300 aa11.58□□□□□ -0.56
SCN8A-206ENST00000550891 TRAV2A0A0B4J234 112 aa11.58□□□□□ -0.56
SCN8A-206ENST00000550891 SMIM17P0DL12 118 aa11.58□□□□□ -0.56
SCN8A-206ENST00000550891 AP1S3Q96PC3 154 aa11.58□□□□□ -0.56
SCN8A-206ENST00000550891 SETD2Q9BYW2 2564 aaPredicted RBP11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 88.6 ms