RNA–Protein interactions for RNA: ENST00000550477.5

SMARCD1-209, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 3

Gene SMARCD1, Length 911 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-209ENST00000550477 PFN1P07737 140 aaKnown RBP15.59■□□□□ 0.09
SMARCD1-209ENST00000550477 TIRAPP58753 221 aa15.59■□□□□ 0.09
SMARCD1-209ENST00000550477 ARL6IP6Q8N6S5 226 aa15.59■□□□□ 0.09
SMARCD1-209ENST00000550477 SDF2L1Q9HCN8 221 aa15.59■□□□□ 0.09
SMARCD1-209ENST00000550477 MBD2Q9UBB5 411 aa15.59■□□□□ 0.09
SMARCD1-209ENST00000550477 A0A1W2PPV4 95 aa15.58■□□□□ 0.08
SMARCD1-209ENST00000550477 CIDEAO60543 219 aa15.58■□□□□ 0.08
SMARCD1-209ENST00000550477 NTN5Q8WTR8 489 aaPredicted RBP15.58■□□□□ 0.08
SMARCD1-209ENST00000550477 IGLV5-52A0A0A0MRZ9 124 aa15.57■□□□□ 0.08
SMARCD1-209ENST00000550477 GNRH2O43555 120 aa15.57■□□□□ 0.08
SMARCD1-209ENST00000550477 PQLC2Q6ZP29 291 aa15.57■□□□□ 0.08
SMARCD1-209ENST00000550477 PRADC1Q9BSG0 188 aa15.57■□□□□ 0.08
SMARCD1-209ENST00000550477 TREM1Q9NP99 234 aa15.57■□□□□ 0.08
SMARCD1-209ENST00000550477 IGHV3-16A0A0C4DH30 117 aa15.56■□□□□ 0.08
SMARCD1-209ENST00000550477 H0YIZ8 118 aa15.56■□□□□ 0.08
SMARCD1-209ENST00000550477 ACOT6Q3I5F7 207 aaPredicted RBP15.56■□□□□ 0.08
SMARCD1-209ENST00000550477 PPP1R1CQ8WVI7 109 aa15.56■□□□□ 0.08
SMARCD1-209ENST00000550477 NDFIP1Q9BT67 221 aa15.56■□□□□ 0.08
SMARCD1-209ENST00000550477 HSPB11Q9Y547 144 aa15.56■□□□□ 0.08
SMARCD1-209ENST00000550477 FBLL1A6NHQ2 334 aaKnown RBP15.55■□□□□ 0.08
SMARCD1-209ENST00000550477 LINC01556Q5JQF7 62 aa15.55■□□□□ 0.08
SMARCD1-209ENST00000550477 OR10J3Q5JRS4 329 aa15.55■□□□□ 0.08
SMARCD1-209ENST00000550477 GOLT1AQ6ZVE7 132 aa15.55■□□□□ 0.08
SMARCD1-209ENST00000550477 SMR3BP02814 79 aaPredicted RBP15.54■□□□□ 0.08
SMARCD1-209ENST00000550477 ASB13Q8WXK3 278 aa15.54■□□□□ 0.08
SMARCD1-209ENST00000550477 TMEM70Q9BUB7 260 aa15.54■□□□□ 0.08
SMARCD1-209ENST00000550477 SH3BGRL3Q9H299 93 aa15.54■□□□□ 0.08
SMARCD1-209ENST00000550477 DMBT1Q9UGM3 2413 aaPredicted RBP15.54■□□□□ 0.08
SMARCD1-209ENST00000550477 INMT-MINDY4F8WBC2 141 aa15.53■□□□□ 0.08
SMARCD1-209ENST00000550477 TYMSP04818 313 aa15.53■□□□□ 0.08
SMARCD1-209ENST00000550477 GATA1P15976 413 aaPredicted RBP15.53■□□□□ 0.08
SMARCD1-209ENST00000550477 RPL12P30050 165 aaKnown RBP15.53■□□□□ 0.08
SMARCD1-209ENST00000550477 LOC100131303A0A0U1RQF7 123 aa15.52■□□□□ 0.08
SMARCD1-209ENST00000550477 SERTM2A0A1B0GWG4 89 aa15.52■□□□□ 0.08
SMARCD1-209ENST00000550477 IBA57-AS1B1ANH7 110 aa15.52■□□□□ 0.08
SMARCD1-209ENST00000550477 ZNF876PQ49A33 203 aa15.52■□□□□ 0.08
SMARCD1-209ENST00000550477 SMIM3Q9BZL3 60 aa15.52■□□□□ 0.08
SMARCD1-209ENST00000550477 F6UZH7 168 aa15.51■□□□□ 0.07
SMARCD1-209ENST00000550477 K7EQM0 130 aa15.51■□□□□ 0.07
SMARCD1-209ENST00000550477 SSNA1O43805 119 aa15.51■□□□□ 0.07
SMARCD1-209ENST00000550477 MPC2O95563 127 aa15.51■□□□□ 0.07
SMARCD1-209ENST00000550477 RHOHQ15669 191 aa15.51■□□□□ 0.07
SMARCD1-209ENST00000550477 TRBV6-4A0A1B0GX49 114 aa15.5■□□□□ 0.07
SMARCD1-209ENST00000550477 Q6ZSN1 163 aa15.5■□□□□ 0.07
SMARCD1-209ENST00000550477 Q9HAA7 133 aa15.5■□□□□ 0.07
SMARCD1-209ENST00000550477 TAAR5O14804 337 aa15.49■□□□□ 0.07
SMARCD1-209ENST00000550477 UPK1BO75841 260 aa15.49■□□□□ 0.07
SMARCD1-209ENST00000550477 H2BFSP57053 126 aa15.49■□□□□ 0.07
SMARCD1-209ENST00000550477 SLC25A29Q8N8R3 303 aa15.49■□□□□ 0.07
SMARCD1-209ENST00000550477 TM2D2Q9BX73 214 aa15.49■□□□□ 0.07
SMARCD1-209ENST00000550477 LRCOL1A6NCL2 159 aa15.48■□□□□ 0.07
SMARCD1-209ENST00000550477 ZFP69Q49AA0 526 aa15.48■□□□□ 0.07
SMARCD1-209ENST00000550477 LELP1Q5T871 98 aa15.48■□□□□ 0.07
SMARCD1-209ENST00000550477 Q8N814 137 aa15.48■□□□□ 0.07
SMARCD1-209ENST00000550477 TRAV8-1A0A0A6YYK1 113 aa15.47■□□□□ 0.07
SMARCD1-209ENST00000550477 OR10G9Q8NGN4 311 aa15.47■□□□□ 0.07
SMARCD1-209ENST00000550477 OR10G7Q8NGN6 311 aa15.47■□□□□ 0.07
SMARCD1-209ENST00000550477 RS1O15537 224 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 IGHV3-30P01768 117 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 IGHV3-33P01772 117 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 IGHV3-30-3P0DP02 117 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 IGHV3-30-5P0DP03 117 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 MGST1P10620 155 aaKnown RBP15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 CFAP126Q5VTH2 177 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 ATP6V0E2Q8NHE4 81 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 TVP23CQ96ET8 276 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 GTSF1LQ9H1H1 148 aa15.46■□□□□ 0.07
SMARCD1-209ENST00000550477 EIF3GO75821 320 aaKnown RBP eCLIP15.45■□□□□ 0.06
SMARCD1-209ENST00000550477 LAGE3Q14657 143 aa15.45■□□□□ 0.06
SMARCD1-209ENST00000550477 MARVELD1Q9BSK0 173 aa15.45■□□□□ 0.06
SMARCD1-209ENST00000550477 C1QBP02746 253 aa15.44■□□□□ 0.06
SMARCD1-209ENST00000550477 GNG5P63218 68 aa15.44■□□□□ 0.06
SMARCD1-209ENST00000550477 C5orf17Q8NAS9 161 aa15.44■□□□□ 0.06
SMARCD1-209ENST00000550477 CDC34P49427 236 aaPredicted RBP15.43■□□□□ 0.06
SMARCD1-209ENST00000550477 DEFA1P59665 94 aa15.43■□□□□ 0.06
SMARCD1-209ENST00000550477 DEFA3P59666 94 aa15.43■□□□□ 0.06
SMARCD1-209ENST00000550477 RAB2AP61019 212 aa15.43■□□□□ 0.06
SMARCD1-209ENST00000550477 SMUG1Q53HV7 270 aa15.43■□□□□ 0.06
SMARCD1-209ENST00000550477 PTH2Q96A98 100 aa15.43■□□□□ 0.06
SMARCD1-209ENST00000550477 SGK494Q96LW2 274 aa15.43■□□□□ 0.06
SMARCD1-209ENST00000550477 IGHV3-73A0A0B4J1V6 119 aa15.42■□□□□ 0.06
SMARCD1-209ENST00000550477 HMGB3O15347 200 aaKnown RBP15.42■□□□□ 0.06
SMARCD1-209ENST00000550477 TOR2AQ5JU69 321 aa15.42■□□□□ 0.06
SMARCD1-209ENST00000550477 FLG2Q5D862 2391 aaPredicted RBP15.42■□□□□ 0.06
SMARCD1-209ENST00000550477 TRAV8-3A0A0A6YYJ7 113 aa15.41■□□□□ 0.06
SMARCD1-209ENST00000550477 GCGP01275 180 aa15.41■□□□□ 0.06
SMARCD1-209ENST00000550477 TCRAP04437 139 aa15.41■□□□□ 0.06
SMARCD1-209ENST00000550477 ARL14EPLP0DKL9 152 aa15.41■□□□□ 0.06
SMARCD1-209ENST00000550477 HAMPP81172 84 aa15.41■□□□□ 0.06
SMARCD1-209ENST00000550477 SAPCD1Q5SSQ6 148 aa15.41■□□□□ 0.06
SMARCD1-209ENST00000550477 PSG8Q9UQ74 426 aa15.41■□□□□ 0.06
SMARCD1-209ENST00000550477 J3QL48 77 aa15.4■□□□□ 0.06
SMARCD1-209ENST00000550477 MBP02144 154 aa15.4■□□□□ 0.06
SMARCD1-209ENST00000550477 PLA2G1BP04054 148 aaKnown RBP15.4■□□□□ 0.06
SMARCD1-209ENST00000550477 S100A4P26447 101 aaKnown RBP15.4■□□□□ 0.06
SMARCD1-209ENST00000550477 C9orf85Q96MD7 179 aa15.4■□□□□ 0.06
SMARCD1-209ENST00000550477 WFDC1Q9HC57 220 aa15.4■□□□□ 0.06
SMARCD1-209ENST00000550477 FAT1Q14517 4588 aa15.39■□□□□ 0.05
SMARCD1-209ENST00000550477 STAG3L2P0CL84 134 aa15.39■□□□□ 0.05
SMARCD1-209ENST00000550477 STAG3L3P0CL85 134 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms