RNA–Protein interactions for RNA: ENST00000550331.1

NEK3-201, Transcript of NIMA related kinase 3, humanhuman

TSL 2

Gene NEK3, Length 733 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK3-201ENST00000550331 ANKRD39Q53RE8 183 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 Q6AWC8 147 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 MZT2BQ6NZ67 158 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 Q6ZQT7 251 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 LINC00299Q6ZSB3 139 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 OR10G4Q8NGN3 311 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 RASL10AQ92737 203 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 PHYHIPLQ96FC7 376 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 SPXQ9BT56 116 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 NMES1Q9C002 83 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 MSRB1Q9NZV6 116 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 NDUFA13Q9P0J0 144 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 MDFICQ9P1T7 246 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 LENEPQ9Y5L5 61 aa5.17□□□□□ -1.58
NEK3-201ENST00000550331 C9JCJ5 164 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 C17orf112F2Z3M2 114 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 OR7C2O60412 319 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 IFNA5P01569 189 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 OR10J4P0C629 311 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 DNAH10OSP0CZ25 163 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 XGP55808 180 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 RANP62826 216 aaKnown RBP5.16□□□□□ -1.58
NEK3-201ENST00000550331 UBE2L3P68036 154 aaKnown RBP5.16□□□□□ -1.58
NEK3-201ENST00000550331 TDRG1Q3Y452 100 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 MUC21Q5SSG8 566 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 FAM159AQ6UWV7 190 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 WFDC10BQ8IUB3 73 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 C10orf126Q8N4M7 172 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 TMED6Q8WW62 240 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 ZNF479Q96JC4 524 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 TXNDC17Q9BRA2 123 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 OR5AC2Q9NZP5 309 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 TNFRSF18Q9Y5U5 241 aa5.16□□□□□ -1.58
NEK3-201ENST00000550331 TRAV4A0A0B4J268 109 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 DIRC3C9JPN6 131 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 SFTA3P0C7M3 94 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 GYPEP15421 78 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 TAS2R45P59539 299 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 KRTAP10-1P60331 282 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 ASAH1Q13510 395 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 TMEM183BQ1AE95 376 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 LRRC37A5PQ49AS3 106 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 KHDC3LQ587J8 217 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 SH2D6Q7Z4S9 175 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 TMEM183AQ8IXX5 376 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 ATP5SQ99766 215 aa5.15□□□□□ -1.59
NEK3-201ENST00000550331 H0YIZ8 118 aa5.14□□□□□ -1.59
NEK3-201ENST00000550331 CRYGDP07320 174 aa5.14□□□□□ -1.59
NEK3-201ENST00000550331 FUSP35637 526 aaKnown RBP eCLIP5.14□□□□□ -1.59
NEK3-201ENST00000550331 TIRAPP58753 221 aa5.14□□□□□ -1.59
NEK3-201ENST00000550331 CYCSP99999 105 aaKnown RBP5.14□□□□□ -1.59
NEK3-201ENST00000550331 ARL6IP6Q8N6S5 226 aa5.14□□□□□ -1.59
NEK3-201ENST00000550331 OR4C5Q8NGB2 326 aa5.14□□□□□ -1.59
NEK3-201ENST00000550331 ENKURQ8TC29 256 aa5.14□□□□□ -1.59
NEK3-201ENST00000550331 OTORQ9NRC9 128 aa5.14□□□□□ -1.59
NEK3-201ENST00000550331 TRAV21A0A0B4J279 112 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 IGHV3-16A0A0C4DH30 117 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 M0R2P5 195 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 SIX6O95475 246 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 SMR3BP02814 79 aaPredicted RBP5.13□□□□□ -1.59
NEK3-201ENST00000550331 PET100P0DJ07 73 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 GCSHP23434 173 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 FFAR4Q5NUL3 377 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 FAM74A1Q5RGS3 127 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 CMTM2Q8TAZ6 248 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 NTN5Q8WTR8 489 aaPredicted RBP5.13□□□□□ -1.59
NEK3-201ENST00000550331 S100ZQ8WXG8 99 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 NAGKQ9UJ70 344 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 HSPB11Q9Y547 144 aa5.13□□□□□ -1.59
NEK3-201ENST00000550331 IGHV3-38A0A0C4DH36 116 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 PGPA6NDG6 321 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 CIDEAO60543 219 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 TYMSP04818 313 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 GATA1P15976 413 aaPredicted RBP5.12□□□□□ -1.59
NEK3-201ENST00000550331 PPT1P50897 306 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 H2BFSP57053 126 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 LINC01556Q5JQF7 62 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 PQLC2Q6ZP29 291 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 SCGB1C1Q8TD33 95 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 PPP1R1CQ8WVI7 109 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 KCNS1Q96KK3 526 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 HYLS1Q96M11 299 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 TMEM70Q9BUB7 260 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 SDF2L1Q9HCN8 221 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 MBD2Q9UBB5 411 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 DNAH8Q96JB1 4490 aa5.12□□□□□ -1.59
NEK3-201ENST00000550331 IGLV5-52A0A0A0MRZ9 124 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 TRAV8-6A0A0B4J262 113 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 LOC100131303A0A0U1RQF7 123 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 A0A1W2PPV4 95 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 LRCOL1A6NCL2 159 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 FBLL1A6NHQ2 334 aaKnown RBP5.11□□□□□ -1.59
NEK3-201ENST00000550331 IBA57-AS1B1ANH7 110 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 INMT-MINDY4F8WBC2 141 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 GNRH2O43555 120 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 PSCAO43653 123 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 UPK1BO75841 260 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 MPC2O95563 127 aa5.11□□□□□ -1.59
NEK3-201ENST00000550331 PFN1P07737 140 aaKnown RBP5.11□□□□□ -1.59
NEK3-201ENST00000550331 NHLRC2Q8NBF2 726 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms