RNA–Protein interactions for RNA: ENST00000550280.1

SMARCD1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1, humanhuman

TSL 2

Gene SMARCD1, Length 567 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD1-208ENST00000550280 SLC25A29Q8N8R3 303 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 C11orf21Q9P2W6 132 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 NAGKQ9UJ70 344 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 LENEPQ9Y5L5 61 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 PKHD1L1Q86WI1 4243 aa7.67□□□□□ -1.18
SMARCD1-208ENST00000550280 TRAV8-1A0A0A6YYK1 113 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 KRTAP29-1A8MX34 341 aaPredicted RBP7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 F6UZH7 168 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 J3QL48 77 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 PSCAO43653 123 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 IGHV3-30P01768 117 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 IGHV3-33P01772 117 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 IGHV3-30-3P0DP02 117 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 IGHV3-30-5P0DP03 117 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 UBE2L3P68036 154 aaKnown RBP7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 NHLRC2Q8NBF2 726 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 TMED6Q8WW62 240 aa7.66□□□□□ -1.18
SMARCD1-208ENST00000550280 C1QBP02746 253 aa7.65□□□□□ -1.18
SMARCD1-208ENST00000550280 CSN1S1P47710 185 aa7.65□□□□□ -1.18
SMARCD1-208ENST00000550280 RS1O15537 224 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 PPT1P50897 306 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 ZNF80P51504 273 aaPredicted RBP7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 LRRC37A5PQ49AS3 106 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 LINC01620Q4KN68 170 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 CFAP126Q5VTH2 177 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 LINC00528Q8N1L1 170 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 HYLS1Q96M11 299 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 Q9UF83 564 aa7.64□□□□□ -1.19
SMARCD1-208ENST00000550280 IGHV3-73A0A0B4J1V6 119 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 PGPA6NDG6 321 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 LECT2O14960 151 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 LINC00694P0DN24 101 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 GNG5P63218 68 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 FFAR4Q5NUL3 377 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 LELP1Q5T871 98 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 GOLT1AQ6ZVE7 132 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 SH2D6Q7Z4S9 175 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 OTORQ9NRC9 128 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 RPH3ALQ9UNE2 315 aa7.63□□□□□ -1.19
SMARCD1-208ENST00000550280 TRAV21A0A0B4J279 112 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 TRBV6-4A0A1B0GX49 114 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 PGPEP1LA6NFU8 196 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 FBLL1A6NHQ2 334 aaKnown RBP7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 H2BFSP57053 126 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 OR10J3Q5JRS4 329 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 TMEM75Q8N9X5 138 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 DNAJC30Q96LL9 226 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 SGK494Q96LW2 274 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 C9orf85Q96MD7 179 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 ATP5SQ99766 215 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 NMES1Q9C002 83 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 WFDC1Q9HC57 220 aa7.62□□□□□ -1.19
SMARCD1-208ENST00000550280 TRAV8-6A0A0B4J262 113 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 FAM240BA0A1B0GVZ2 78 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 PFN1P07737 140 aaKnown RBP7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 LAGE3Q14657 143 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 ZNF876PQ49A33 203 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 KHDC3LQ587J8 217 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 SCXQ7RTU7 201 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 DAZ4Q86SG3 579 aaKnown RBP7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 SDF2L1Q9HCN8 221 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 TREM1Q9NP99 234 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 DAZ3Q9NR90 486 aaKnown RBP7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 KCNIP2Q9NS61 270 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 MBD2Q9UBB5 411 aa7.61□□□□□ -1.19
SMARCD1-208ENST00000550280 IGLV2-33A0A075B6J2 118 aaPredicted RBP7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 C17orf112F2Z3M2 114 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 PLA2G1BP04054 148 aaKnown RBP7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 RNASE3P12724 160 aaKnown RBP7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 RHOHQ15669 191 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 ZNF506Q5JVG8 444 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 ATP6V0E2Q8NHE4 81 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 ASB13Q8WXK3 278 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 CCDC32Q9BV29 185 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 SMIM3Q9BZL3 60 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 GTSF1LQ9H1H1 148 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 HSPB11Q9Y547 144 aa7.6□□□□□ -1.19
SMARCD1-208ENST00000550280 HMGB3O15347 200 aaKnown RBP7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 IGLV2-11P01706 119 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 RAB2AP61019 212 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 ASAH1Q13510 395 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 ARL6IP6Q8N6S5 226 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 DEFB104AQ8WTQ1 72 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 PPP1R1CQ8WVI7 109 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 KCNS1Q96KK3 526 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 PRADC1Q9BSG0 188 aa7.59□□□□□ -1.19
SMARCD1-208ENST00000550280 TAS2R45P59539 299 aa7.58□□□□□ -1.2
SMARCD1-208ENST00000550280 IFITM3Q01628 133 aa7.58□□□□□ -1.2
SMARCD1-208ENST00000550280 UFSP1Q6NVU6 142 aa7.58□□□□□ -1.2
SMARCD1-208ENST00000550280 CMTM2Q8TAZ6 248 aa7.58□□□□□ -1.2
SMARCD1-208ENST00000550280 BAALCQ8WXS3 180 aa7.58□□□□□ -1.2
SMARCD1-208ENST00000550280 PTH2Q96A98 100 aa7.58□□□□□ -1.2
SMARCD1-208ENST00000550280 JPT2Q9H910 190 aa7.58□□□□□ -1.2
SMARCD1-208ENST00000550280 GAGE12JA6NER3 117 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 MPC2O95563 127 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 GAGE1Q13065 139 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 GAGE4Q13068 117 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 GAGE5Q13069 117 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 GAGE13Q4V321 117 aa7.57□□□□□ -1.2
SMARCD1-208ENST00000550280 PQLC2Q6ZP29 291 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 69.6 ms