RNA–Protein interactions for RNA: ENST00000550150.1

SMARCC2-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 2, humanhuman

TSL 2

Gene SMARCC2, Length 3,244 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC2-208ENST00000550150 SIVA1O15304 175 aa8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 PDE6HQ13956 83 aa8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 C15orf32Q32M92 178 aa8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 ZNF672Q499Z4 452 aaPredicted RBP8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 ZNF502Q8TBZ5 544 aa8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 ITLN2Q8WWU7 325 aaPredicted RBP8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 DPF1Q92782 380 aa8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 SMAD5-AS1Q9Y6J3 95 aa8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 ABCA12Q86UK0 2595 aa8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 S100A4P26447 101 aaKnown RBP8.31□□□□□ -1.08
SMARCC2-208ENST00000550150 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP8.31□□□□□ -1.082e-10■■■■■ 38.9
SMARCC2-208ENST00000550150 GAGE12HA6NDE8 117 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 J3QR89 54 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 CEACAM3P40198 252 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 TMEM78Q5T7P6 136 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 GCN1Q92616 2671 aaKnown RBP8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 IGLL5B9A064 214 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 APOMO95445 188 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 CTSGP08311 255 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 IGLC6P0CF74 106 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 ARL3P36405 182 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 SRSF9Q13242 221 aaKnown RBP eCLIP8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 GLMPQ8WWB7 406 aa8.3□□□□□ -1.08
SMARCC2-208ENST00000550150 C12orf74Q32Q52 190 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 MRPL16Q9NX20 251 aaKnown RBP8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 IGLV11-55A0A075B6I3 123 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 IGKV3D-20A0A0C4DH25 116 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 TRBV6-1A0A0K0K1D8 114 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 OR11H12B2RN74 326 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 LAGE3Q14657 143 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 OR11H1Q8NG94 326 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 OR11H2Q8NH07 326 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 C11orf21Q9P2W6 132 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 APCP25054 2843 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 B9A039 149 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 F8W735 103 aaPredicted RBP8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 G3V318 75 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 SCGB2A1O75556 95 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 PAX8Q06710 450 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 GAGE13Q4V321 117 aa8.29□□□□□ -1.08
SMARCC2-208ENST00000550150 ATP5LO75964 103 aa8.28□□□□□ -1.08
SMARCC2-208ENST00000550150 GATD1Q8NB37 220 aa8.28□□□□□ -1.08
SMARCC2-208ENST00000550150 SCGB3A1Q96QR1 104 aa8.28□□□□□ -1.08
SMARCC2-208ENST00000550150 AGPAT4-IT1Q9H0P7 198 aa8.28□□□□□ -1.08
SMARCC2-208ENST00000550150 AKAP9Q99996 3911 aa8.28□□□□□ -1.08
SMARCC2-208ENST00000550150 IGHV3OR16-10A0A075B7F0 116 aa8.27□□□□□ -1.08
SMARCC2-208ENST00000550150 IGHG4P01861 327 aa8.27□□□□□ -1.08
SMARCC2-208ENST00000550150 IGF1P05019 195 aa8.27□□□□□ -1.08
SMARCC2-208ENST00000550150 SRSF1Q07955 248 aaKnown RBP eCLIP8.27□□□□□ -1.08
SMARCC2-208ENST00000550150 C14orf178Q8N769 122 aaPredicted RBP8.27□□□□□ -1.08
SMARCC2-208ENST00000550150 SPAG8Q99932 426 aaPredicted RBP8.27□□□□□ -1.08
SMARCC2-208ENST00000550150 PGPEP1Q9NXJ5 209 aa8.27□□□□□ -1.08
SMARCC2-208ENST00000550150 PSMB2P49721 201 aa8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 CD300EQ496F6 205 aaPredicted RBP8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 FOXI2Q6ZQN5 318 aa8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 Q8N8P6 123 aa8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 CIDEAO60543 219 aa8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 SORL1Q92673 2214 aa8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 TIMD4Q96H15 378 aa8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 C16orf92Q96LL3 132 aa8.27□□□□□ -1.09
SMARCC2-208ENST00000550150 KLHL30-AS1Q8NEE0 82 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 RPL39LQ96EH5 51 aaKnown RBP8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 PTPN13Q12923 2485 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 H7C2G1 150 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 HLA-DRB4P13762 266 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 ZNF843Q8N446 348 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 PTH2Q96A98 100 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 C20orf78Q9BR46 151 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 SPANXB1Q9NS25 103 aaPredicted RBP8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 CHTOPQ9Y3Y2 248 aaKnown RBP8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 HLA-DRB4X5D2U9 266 aa8.26□□□□□ -1.09
SMARCC2-208ENST00000550150 VMO1Q7Z5L0 202 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 LINC01548A6NM66 108 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 ZNF815PA8K554 130 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 LY6LH3BQJ8 138 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 LINC01549A6NIU2 74 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 TMEM219Q86XT9 240 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 ABCA2Q9BZC7 2435 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 NOTCH3Q9UM47 2321 aa8.25□□□□□ -1.09
SMARCC2-208ENST00000550150 A0A087WX48 190 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 NDUFS8O00217 210 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 ATP6V0E1O15342 81 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 HOXA3O43365 443 aaPredicted RBP8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 ZNF575Q86XF7 245 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 PHLDA1Q8WV24 401 aaPredicted RBP8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 RNF5Q99942 180 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 PHLDA3Q9Y5J5 127 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 DOPEY2Q9Y3R5 2298 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 E9PLD3 99 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 F8W1H4 67 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 SRD5A1P18405 259 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 CCDC144NLQ6NUI1 221 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 UNQ5830/PRO19650/PRO19816Q6UY13 95 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 CLUHP3Q96NS8 147 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 HIGD1BQ9P298 99 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 IGHV7-81A0A0B4J1V7 117 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 F5H697 171 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 BUB3O43684 328 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 RAB9AP51151 201 aa8.24□□□□□ -1.09
SMARCC2-208ENST00000550150 SYT8Q8NBV8 401 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 186.2 ms