RNA–Protein interactions for RNA: ENST00000549308.5

PTPRR-209, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRR, Length 1,603 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-209ENST00000549308 ZNF324O75467 553 aaPredicted RBP8.89□□□□□ -0.99
PTPRR-209ENST00000549308 AMBPP02760 352 aa8.89□□□□□ -0.99
PTPRR-209ENST00000549308 RAB4BP61018 213 aa8.89□□□□□ -0.99
PTPRR-209ENST00000549308 COX19Q49B96 90 aa8.89□□□□□ -0.99
PTPRR-209ENST00000549308 ATP5L2Q7Z4Y8 100 aa8.89□□□□□ -0.99
PTPRR-209ENST00000549308 DEFB125Q8N687 156 aa8.89□□□□□ -0.99
PTPRR-209ENST00000549308 A0A1B0GUT8 65 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 CRXO43186 299 aaPredicted RBP8.88□□□□□ -0.99
PTPRR-209ENST00000549308 ARMS2P0C7Q2 107 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 FRMD6-AS1P0C7T7 363 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 IGLC6P0CF74 106 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 RPL35AP18077 110 aaKnown RBP8.88□□□□□ -0.99
PTPRR-209ENST00000549308 ASIPP42127 132 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 NUTF2P61970 127 aaKnown RBP8.88□□□□□ -0.99
PTPRR-209ENST00000549308 RIGQ13278 110 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 PRR31Q5SQ13 230 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 WDR73Q6P4I2 378 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 KCNS1Q96KK3 526 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 TRAPPC1Q9Y5R8 145 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 SORL1Q92673 2214 aa8.88□□□□□ -0.99
PTPRR-209ENST00000549308 IGHV1OR15-1A0A075B7D0 117 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 SNURFLB1AK76 121 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 WIPF1O43516 503 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 INSP01308 110 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 TRGC2P03986 189 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 S100A4P26447 101 aaKnown RBP8.87□□□□□ -0.99
PTPRR-209ENST00000549308 CAMPP49913 170 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 SSTP61278 116 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 HBBP68871 147 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 RASL11AQ6T310 242 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 ZNF575Q86XF7 245 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 FRZBQ92765 325 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 TIMM8BQ9Y5J9 83 aaPredicted RBP8.87□□□□□ -0.99
PTPRR-209ENST00000549308 TENM1Q9UKZ4 2725 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 MUC21A0A0G2JKD1 596 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 MUC21A0A140T8X8 626 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 A0A1B0GXF2 115 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 F2Z2F3 143 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 H3BVH4 76 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 GNRH2O43555 120 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 CTRLP40313 264 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 RAB5BP61020 215 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 FABP9Q0Z7S8 132 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 TMEM136Q6ZRR5 245 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 ZFP82Q8N141 532 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 GNB1LQ9BYB4 327 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 XCL2Q9UBD3 114 aa8.87□□□□□ -0.99
PTPRR-209ENST00000549308 MT-ND6P03923 174 aa8.86□□□□□ -0.99
PTPRR-209ENST00000549308 S100A8P05109 93 aa8.86□□□□□ -0.99
PTPRR-209ENST00000549308 RBMY1A1P0DJD3 496 aaKnown RBP8.86□□□□□ -0.99
PTPRR-209ENST00000549308 RBMY1CP0DJD4 496 aa8.86□□□□□ -0.99
PTPRR-209ENST00000549308 RBMY1FQ15415 496 aaKnown RBP8.86□□□□□ -0.99
PTPRR-209ENST00000549308 MORN3Q6PF18 240 aaPredicted RBP8.86□□□□□ -0.99
PTPRR-209ENST00000549308 C20orf144Q9BQM9 153 aa8.86□□□□□ -0.99
PTPRR-209ENST00000549308 MRPL18Q9H0U6 180 aaKnown RBP8.86□□□□□ -0.99
PTPRR-209ENST00000549308 A0A1B0GW15 77 aa8.85□□□□□ -0.99
PTPRR-209ENST00000549308 HLA-DQA1P01909 254 aa8.85□□□□□ -0.99
PTPRR-209ENST00000549308 OXLD1Q5BKU9 147 aa8.85□□□□□ -0.99
PTPRR-209ENST00000549308 LINC01587Q99440 93 aa8.85□□□□□ -0.99
PTPRR-209ENST00000549308 TRGV11A0A075B6L2 103 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 CBY3A6NI87 242 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 SNAI2O43623 268 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 OR5AL1P0C617 328 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 MED14OSP0DP75 135 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 CACNG7P62955 275 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 TWIST1Q15672 202 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 TDRG1Q3Y452 100 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 DNLZQ5SXM8 178 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 MDFIQ99750 246 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 TMEM208Q9BTX3 173 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 TP53TG3Q9ULZ0 132 aa8.84□□□□□ -0.99
PTPRR-209ENST00000549308 APCSP02743 223 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 HTN1P15515 57 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 NTF3P20783 257 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 SPANXN1Q5VSR9 72 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 SSBP4Q9BWG4 385 aaPredicted RBP8.83□□□□□ -1
PTPRR-209ENST00000549308 FBN1P35555 2871 aaKnown RBP8.83□□□□□ -1
PTPRR-209ENST00000549308 IGHV3OR16-12A0A075B7B8 117 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 TRGC1P0CF51 173 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 RNASE3P12724 160 aaKnown RBP8.83□□□□□ -1
PTPRR-209ENST00000549308 LURAP1LQ8IV03 231 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 Q8N1Y9 231 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 OR10AG1Q8NH19 301 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 C1QTNF4Q9BXJ3 329 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 ZMAT5Q9UDW3 170 aaKnown RBP8.83□□□□□ -1
PTPRR-209ENST00000549308 PHLDA3Q9Y5J5 127 aa8.83□□□□□ -1
PTPRR-209ENST00000549308 IGHV3-16A0A0C4DH30 117 aa8.82□□□□□ -1
PTPRR-209ENST00000549308 SPRY2O43597 315 aa8.82□□□□□ -1
PTPRR-209ENST00000549308 C1orf158Q8N1D5 194 aa8.82□□□□□ -1
PTPRR-209ENST00000549308 TMEM256Q8N2U0 113 aa8.82□□□□□ -1
PTPRR-209ENST00000549308 CNFNQ9BYD5 112 aa8.82□□□□□ -1
PTPRR-209ENST00000549308 GOLT1BQ9Y3E0 138 aa8.82□□□□□ -1
PTPRR-209ENST00000549308 LOC102724200A0A096LPH7 203 aaPredicted RBP8.81□□□□□ -1
PTPRR-209ENST00000549308 M0R381 172 aa8.81□□□□□ -1
PTPRR-209ENST00000549308 PHOX2AO14813 284 aa8.81□□□□□ -1
PTPRR-209ENST00000549308 KIAA1644Q3SXP7 199 aa8.81□□□□□ -1
PTPRR-209ENST00000549308 GATD1Q8NB37 220 aa8.81□□□□□ -1
PTPRR-209ENST00000549308 LINC00467Q9BRT7 94 aa8.81□□□□□ -1
PTPRR-209ENST00000549308 CSTL1Q9H114 145 aa8.81□□□□□ -1
PTPRR-209ENST00000549308 SCRT2Q9NQ03 307 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms