RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 SEC11BP0C7V7 166 aa10.99□□□□□ -0.65
DDX54-205ENST00000548786 ZFP69Q49AA0 526 aa10.99□□□□□ -0.65
DDX54-205ENST00000548786 STOML3Q8TAV4 291 aa10.99□□□□□ -0.65
DDX54-205ENST00000548786 SFT2D1Q8WV19 159 aa10.99□□□□□ -0.65
DDX54-205ENST00000548786 SDF2L1Q9HCN8 221 aa10.99□□□□□ -0.65
DDX54-205ENST00000548786 C11orf21Q9P2W6 132 aa10.99□□□□□ -0.65
DDX54-205ENST00000548786 LINC00588Q9Y4M8 146 aa10.99□□□□□ -0.65
DDX54-205ENST00000548786 IGHV3-16A0A0C4DH30 117 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 CCL18P55774 89 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 LGALS9BQ3B8N2 356 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 TDRG1Q3Y452 100 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 SMUG1Q53HV7 270 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 Q6ZNX1 250 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 VSIG2Q96IQ7 327 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 ARL2-SNX15V9GYD0 113 aa10.98□□□□□ -0.65
DDX54-205ENST00000548786 TPT1P13693 172 aaKnown RBP10.97□□□□□ -0.65
DDX54-205ENST00000548786 PPT1P50897 306 aa10.97□□□□□ -0.65
DDX54-205ENST00000548786 Q86TA4 180 aa10.97□□□□□ -0.65
DDX54-205ENST00000548786 C18orf15Q96N68 181 aa10.97□□□□□ -0.65
DDX54-205ENST00000548786 MUC4Q99102 2169 aa10.97□□□□□ -0.65
DDX54-205ENST00000548786 HECTD4Q9Y4D8 3996 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 UMAD1C9J7I0 102 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 PAX4O43316 350 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 PAGE4O60829 102 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 PFN1P07737 140 aaKnown RBP10.96□□□□□ -0.65
DDX54-205ENST00000548786 EIF5AP63241 154 aaKnown RBP10.96□□□□□ -0.65
DDX54-205ENST00000548786 LGALSLQ3ZCW2 172 aaPredicted RBP10.96□□□□□ -0.65
DDX54-205ENST00000548786 TCTE3Q8IZS6 198 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 ZNF479Q96JC4 524 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 KCNS1Q96KK3 526 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 SPXQ9BT56 116 aa10.96□□□□□ -0.65
DDX54-205ENST00000548786 DNAH17Q9UFH2 4485 aa10.96□□□□□ -0.66
DDX54-205ENST00000548786 FAT2Q9NYQ8 4349 aa10.95□□□□□ -0.66
DDX54-205ENST00000548786 A0A096LPF7 62 aa10.95□□□□□ -0.66
DDX54-205ENST00000548786 TRGV4A0A0C4DH28 118 aa10.95□□□□□ -0.66
DDX54-205ENST00000548786 C9JCJ5 164 aa10.95□□□□□ -0.66
DDX54-205ENST00000548786 FHL2Q14192 279 aa10.95□□□□□ -0.66
DDX54-205ENST00000548786 SAPCD1Q5SSQ6 148 aa10.95□□□□□ -0.66
DDX54-205ENST00000548786 HIST1H2BAQ96A08 127 aa10.95□□□□□ -0.66
DDX54-205ENST00000548786 NKX6-2Q9C056 277 aaPredicted RBP10.95□□□□□ -0.66
DDX54-205ENST00000548786 M0R2P5 195 aa10.94□□□□□ -0.66
DDX54-205ENST00000548786 H2AFB1P0C5Y9 115 aa10.94□□□□□ -0.66
DDX54-205ENST00000548786 UBE2G1P62253 170 aa10.94□□□□□ -0.66
DDX54-205ENST00000548786 ESRGQ1W209 222 aa10.94□□□□□ -0.66
DDX54-205ENST00000548786 ZNRF2Q8NHG8 242 aa10.94□□□□□ -0.66
DDX54-205ENST00000548786 MBD3L1Q8WWY6 194 aa10.94□□□□□ -0.66
DDX54-205ENST00000548786 HHLA3Q9XRX5 114 aa10.94□□□□□ -0.66
DDX54-205ENST00000548786 FBLL1A6NHQ2 334 aaKnown RBP10.93□□□□□ -0.66
DDX54-205ENST00000548786 H3BNG1 76 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 AKR1C3P42330 323 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 FAM3BP58499 235 aaPredicted RBP10.93□□□□□ -0.66
DDX54-205ENST00000548786 Q6ZR54 194 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 AKAP14Q86UN6 197 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 NHLRC2Q8NBF2 726 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 OR4C5Q8NGB2 326 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 RASL10AQ92737 203 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 ZC2HC1AQ96GY0 325 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 PRO0255Q9UI72 69 aa10.93□□□□□ -0.66
DDX54-205ENST00000548786 M0R036 132 aa10.92□□□□□ -0.66
DDX54-205ENST00000548786 RTL8CO15255 209 aa10.92□□□□□ -0.66
DDX54-205ENST00000548786 C1QBP02746 253 aa10.92□□□□□ -0.66
DDX54-205ENST00000548786 CRYBA4P53673 196 aa10.92□□□□□ -0.66
DDX54-205ENST00000548786 DPPA3Q6W0C5 159 aa10.92□□□□□ -0.66
DDX54-205ENST00000548786 FMC1Q96HJ9 113 aa10.92□□□□□ -0.66
DDX54-205ENST00000548786 ICOSQ9Y6W8 199 aa10.92□□□□□ -0.66
DDX54-205ENST00000548786 TRAV4A0A0B4J268 109 aa10.91□□□□□ -0.66
DDX54-205ENST00000548786 SCO2A0A1W2PP80 73 aa10.91□□□□□ -0.66
DDX54-205ENST00000548786 ORM1P02763 201 aa10.91□□□□□ -0.66
DDX54-205ENST00000548786 CCL20P78556 96 aa10.91□□□□□ -0.66
DDX54-205ENST00000548786 ZNF876PQ49A33 203 aa10.91□□□□□ -0.66
DDX54-205ENST00000548786 IGHV3-73A0A0B4J1V6 119 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 IGKV3D-20A0A0C4DH25 116 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 NBDYA0A0U1RRE5 68 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 FABP5P3A8MUU1 101 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 SH2D1AO60880 128 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 CRIP1P50238 77 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 Q9H8V8 135 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 GNG13Q9P2W3 67 aa10.9□□□□□ -0.66
DDX54-205ENST00000548786 TMSB15BA0A087X1C1 80 aa10.89□□□□□ -0.67
DDX54-205ENST00000548786 PRSS29PA6NIE9 313 aa10.89□□□□□ -0.67
DDX54-205ENST00000548786 B4DEV8 164 aa10.89□□□□□ -0.67
DDX54-205ENST00000548786 RNASE3P12724 160 aaKnown RBP10.89□□□□□ -0.67
DDX54-205ENST00000548786 GYPEP15421 78 aa10.89□□□□□ -0.67
DDX54-205ENST00000548786 S100A4P26447 101 aaKnown RBP10.89□□□□□ -0.67
DDX54-205ENST00000548786 C1orf134Q5TEV5 83 aa10.89□□□□□ -0.67
DDX54-205ENST00000548786 C9orf85Q96MD7 179 aa10.89□□□□□ -0.67
DDX54-205ENST00000548786 MRPS16Q9Y3D3 137 aaKnown RBP10.89□□□□□ -0.67
DDX54-205ENST00000548786 LOC100131303A0A0U1RQF7 123 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 GRIFINA4D1Z8 144 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 PGPEP1LA6NFU8 196 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 LTAP01374 205 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 ASIPP42127 132 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 SLAQ13239 276 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 ZNF506Q5JVG8 444 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 FAM162BQ5T6X4 162 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 EIF5AL1Q6IS14 154 aaKnown RBP10.88□□□□□ -0.67
DDX54-205ENST00000548786 LINC00336Q6ZUF6 198 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 PCNPQ8WW12 178 aaKnown RBP10.88□□□□□ -0.67
DDX54-205ENST00000548786 TCEAL7Q9BRU2 100 aa10.88□□□□□ -0.67
DDX54-205ENST00000548786 ZFP30Q9Y2G7 519 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms