RNA–Protein interactions for RNA: ENST00000548570.1

APP-217, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 361 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-217ENST00000548570 LENEPQ9Y5L5 61 aa3.6□□□□□ -1.83
APP-217ENST00000548570 DYNC2H1Q8NCM8 4307 aaKnown RBP3.6□□□□□ -1.83
APP-217ENST00000548570 TRAV12-3A0A0B4J271 114 aa3.59□□□□□ -1.83
APP-217ENST00000548570 IGKV3D-20A0A0C4DH25 116 aa3.59□□□□□ -1.83
APP-217ENST00000548570 C7orf71A4D174 169 aa3.59□□□□□ -1.83
APP-217ENST00000548570 C19orf71A6NCJ1 209 aa3.59□□□□□ -1.83
APP-217ENST00000548570 ZNF705GA8MUZ8 300 aaPredicted RBP3.59□□□□□ -1.83
APP-217ENST00000548570 SPRY2O43597 315 aa3.59□□□□□ -1.83
APP-217ENST00000548570 PDE6DO43924 150 aa3.59□□□□□ -1.83
APP-217ENST00000548570 GCGP01275 180 aa3.59□□□□□ -1.83
APP-217ENST00000548570 IFNA1P01562 189 aa3.59□□□□□ -1.83
APP-217ENST00000548570 RNASE4P34096 147 aaKnown RBP3.59□□□□□ -1.83
APP-217ENST00000548570 APOC4P55056 127 aa3.59□□□□□ -1.83
APP-217ENST00000548570 TAS2R60P59551 318 aa3.59□□□□□ -1.83
APP-217ENST00000548570 OR5I1Q13606 314 aa3.59□□□□□ -1.83
APP-217ENST00000548570 CENPWQ5EE01 88 aa3.59□□□□□ -1.83
APP-217ENST00000548570 EIF4E3Q8N5X7 224 aaKnown RBP3.59□□□□□ -1.83
APP-217ENST00000548570 Q8NAQ8 132 aa3.59□□□□□ -1.83
APP-217ENST00000548570 C11orf72Q8NBR9 251 aa3.59□□□□□ -1.83
APP-217ENST00000548570 IL17DQ8TAD2 202 aa3.59□□□□□ -1.83
APP-217ENST00000548570 OCC1Q8TAD7 63 aa3.59□□□□□ -1.83
APP-217ENST00000548570 FMC1Q96HJ9 113 aa3.59□□□□□ -1.83
APP-217ENST00000548570 LINC00467Q9BRT7 94 aa3.59□□□□□ -1.83
APP-217ENST00000548570 EIF5A2Q9GZV4 153 aaKnown RBP3.59□□□□□ -1.83
APP-217ENST00000548570 TREM1Q9NP99 234 aa3.59□□□□□ -1.83
APP-217ENST00000548570 TP53TG1Q9Y2A0 90 aa3.59□□□□□ -1.83
APP-217ENST00000548570 NBEAL2Q6ZNJ1 2754 aa3.59□□□□□ -1.83
APP-217ENST00000548570 STARD9Q9P2P6 4700 aa3.59□□□□□ -1.84
APP-217ENST00000548570 DNAH7Q8WXX0 4024 aa3.58□□□□□ -1.84
APP-217ENST00000548570 PLECQ15149 4684 aaKnown RBP3.58□□□□□ -1.84
APP-217ENST00000548570 IGHV4-28A0A0C4DH34 117 aa3.58□□□□□ -1.84
APP-217ENST00000548570 C9JCJ5 164 aa3.58□□□□□ -1.84
APP-217ENST00000548570 DEFB4AO15263 64 aa3.58□□□□□ -1.84
APP-217ENST00000548570 GNRH2O43555 120 aa3.58□□□□□ -1.84
APP-217ENST00000548570 SH2D1AO60880 128 aa3.58□□□□□ -1.84
APP-217ENST00000548570 INSP01308 110 aa3.58□□□□□ -1.84
APP-217ENST00000548570 S100A6P06703 90 aa3.58□□□□□ -1.84
APP-217ENST00000548570 GPX1P07203 203 aa3.58□□□□□ -1.84
APP-217ENST00000548570 PFN1P07737 140 aaKnown RBP3.58□□□□□ -1.84
APP-217ENST00000548570 TAGLN2P37802 199 aaKnown RBP3.58□□□□□ -1.84
APP-217ENST00000548570 LEPP41159 167 aa3.58□□□□□ -1.84
APP-217ENST00000548570 RAB14P61106 215 aa3.58□□□□□ -1.84
APP-217ENST00000548570 RPL19P84098 196 aaKnown RBP3.58□□□□□ -1.84
APP-217ENST00000548570 TDRG1Q3Y452 100 aa3.58□□□□□ -1.84
APP-217ENST00000548570 ANXA2RQ3ZCQ2 193 aa3.58□□□□□ -1.84
APP-217ENST00000548570 MUC21Q5SSG8 566 aa3.58□□□□□ -1.84
APP-217ENST00000548570 SAPCD1Q5SSQ6 148 aa3.58□□□□□ -1.84
APP-217ENST00000548570 LINC01551Q86U37 167 aa3.58□□□□□ -1.84
APP-217ENST00000548570 COMMD7Q86VX2 200 aa3.58□□□□□ -1.84
APP-217ENST00000548570 BAGE2Q86Y30 109 aa3.58□□□□□ -1.84
APP-217ENST00000548570 SLC7A5P1Q8MH63 180 aa3.58□□□□□ -1.84
APP-217ENST00000548570 OR11H2Q8NH07 326 aa3.58□□□□□ -1.84
APP-217ENST00000548570 RNASE8Q8TDE3 154 aaKnown RBP3.58□□□□□ -1.84
APP-217ENST00000548570 RCHY1Q96PM5 261 aa3.58□□□□□ -1.84
APP-217ENST00000548570 NEU1Q99519 415 aa3.58□□□□□ -1.84
APP-217ENST00000548570 EDA2RQ9HAV5 297 aa3.58□□□□□ -1.84
APP-217ENST00000548570 MDFICQ9P1T7 246 aa3.58□□□□□ -1.84
APP-217ENST00000548570 ZFP30Q9Y2G7 519 aa3.58□□□□□ -1.84
APP-217ENST00000548570 TENM3Q9P273 2699 aa3.58□□□□□ -1.84
APP-217ENST00000548570 IGHV3OR16-12A0A075B7B8 117 aa3.57□□□□□ -1.84
APP-217ENST00000548570 IGHV1OR15-1A0A075B7D0 117 aa3.57□□□□□ -1.84
APP-217ENST00000548570 IGHV3-16A0A0C4DH30 117 aa3.57□□□□□ -1.84
APP-217ENST00000548570 TMEM218A2RU14 115 aa3.57□□□□□ -1.84
APP-217ENST00000548570 FBLL1A6NHQ2 334 aaKnown RBP3.57□□□□□ -1.84
APP-217ENST00000548570 KRBOX1C9JBD0 128 aa3.57□□□□□ -1.84
APP-217ENST00000548570 H7BYZ3 331 aa3.57□□□□□ -1.84
APP-217ENST00000548570 K7EQM0 130 aa3.57□□□□□ -1.84
APP-217ENST00000548570 AMBPP02760 352 aa3.57□□□□□ -1.84
APP-217ENST00000548570 TYMSP04818 313 aa3.57□□□□□ -1.84
APP-217ENST00000548570 SFTA3P0C7M3 94 aa3.57□□□□□ -1.84
APP-217ENST00000548570 RNASE3P12724 160 aaKnown RBP3.57□□□□□ -1.84
APP-217ENST00000548570 TSPOP30536 169 aa3.57□□□□□ -1.84
APP-217ENST00000548570 CAMPP49913 170 aa3.57□□□□□ -1.84
APP-217ENST00000548570 CEBPGP53567 150 aa3.57□□□□□ -1.84
APP-217ENST00000548570 KRTAP10-2P60368 255 aa3.57□□□□□ -1.84
APP-217ENST00000548570 UBE2G1P62253 170 aa3.57□□□□□ -1.84
APP-217ENST00000548570 RPL23P62829 140 aaKnown RBP3.57□□□□□ -1.84
APP-217ENST00000548570 PEA15Q15121 130 aa3.57□□□□□ -1.84
APP-217ENST00000548570 SMUG1Q53HV7 270 aa3.57□□□□□ -1.84
APP-217ENST00000548570 LINC01587Q99440 93 aa3.57□□□□□ -1.84
APP-217ENST00000548570 C20orf144Q9BQM9 153 aa3.57□□□□□ -1.84
APP-217ENST00000548570 SPATA25Q9BR10 227 aa3.57□□□□□ -1.84
APP-217ENST00000548570 C1QTNF4Q9BXJ3 329 aa3.57□□□□□ -1.84
APP-217ENST00000548570 SMDT1Q9H4I9 107 aa3.57□□□□□ -1.84
APP-217ENST00000548570 SDF2L1Q9HCN8 221 aa3.57□□□□□ -1.84
APP-217ENST00000548570 CELA1Q9UNI1 258 aa3.57□□□□□ -1.84
APP-217ENST00000548570 TRAV21A0A0B4J279 112 aa3.56□□□□□ -1.84
APP-217ENST00000548570 A0A0J9YWU9 116 aa3.56□□□□□ -1.84
APP-217ENST00000548570 GRIFINA4D1Z8 144 aa3.56□□□□□ -1.84
APP-217ENST00000548570 ZNF727A8MUV8 499 aa3.56□□□□□ -1.84
APP-217ENST00000548570 M0R036 132 aa3.56□□□□□ -1.84
APP-217ENST00000548570 GNG4P50150 75 aa3.56□□□□□ -1.84
APP-217ENST00000548570 NUTF2P61970 127 aaKnown RBP3.56□□□□□ -1.84
APP-217ENST00000548570 C10orf91Q5T1B1 145 aa3.56□□□□□ -1.84
APP-217ENST00000548570 PRR27Q6MZM9 219 aa3.56□□□□□ -1.84
APP-217ENST00000548570 UQCC3Q6UW78 93 aa3.56□□□□□ -1.84
APP-217ENST00000548570 LINC00612Q8N6U2 182 aa3.56□□□□□ -1.84
APP-217ENST00000548570 NUDT10Q8NFP7 164 aa3.56□□□□□ -1.84
APP-217ENST00000548570 GTSF1Q8WW33 167 aa3.56□□□□□ -1.84
APP-217ENST00000548570 ISOC2Q96AB3 205 aa3.56□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms