RNA–Protein interactions for RNA: ENST00000548097.5

KRT4-201, Transcript of keratin 4, humanhuman

TSL 1 (best)

Gene KRT4, Length 1,839 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KRT4-201ENST00000548097 SMIM12Q96EX1 92 aa12.39□□□□□ -0.43
KRT4-201ENST00000548097 COL7A1Q02388 2944 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 IGHV1OR15-1A0A075B7D0 117 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 C19orf71A6NCJ1 209 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 CBY3A6NI87 242 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 FAM159AQ6UWV7 190 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 NUDT10Q8NFP7 164 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 NUDT11Q96G61 164 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 C20orf144Q9BQM9 153 aa12.38□□□□□ -0.43
KRT4-201ENST00000548097 GRIFINA4D1Z8 144 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 ZNF575Q86XF7 245 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 SPATA25Q9BR10 227 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 SEC11CQ9BY50 192 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 LY96Q9Y6Y9 160 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 TMEM256Q8N2U0 113 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 ISOC2Q96AB3 205 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 DAZAP1Q96EP5 407 aaKnown RBP12.37□□□□□ -0.43
KRT4-201ENST00000548097 PYGO2Q9BRQ0 406 aa12.37□□□□□ -0.43
KRT4-201ENST00000548097 B4DEV8 164 aa12.36□□□□□ -0.43
KRT4-201ENST00000548097 TYMSP04818 313 aa12.36□□□□□ -0.43
KRT4-201ENST00000548097 GZMBP10144 247 aa12.36□□□□□ -0.43
KRT4-201ENST00000548097 EMP1P54849 157 aa12.36□□□□□ -0.43
KRT4-201ENST00000548097 ERVFC1-1P60608 527 aa12.36□□□□□ -0.43
KRT4-201ENST00000548097 IBA57Q5T440 356 aaKnown RBP12.36□□□□□ -0.43
KRT4-201ENST00000548097 MDFICQ9P1T7 246 aa12.36□□□□□ -0.43
KRT4-201ENST00000548097 RRN3P1Q2M238 152 aa12.35□□□□□ -0.43
KRT4-201ENST00000548097 TP53TG1Q9Y2A0 90 aa12.35□□□□□ -0.43
KRT4-201ENST00000548097 IGHV4-28A0A0C4DH34 117 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 P01737 135 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 ZMAT4Q9H898 229 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 TIMM8BQ9Y5J9 83 aaPredicted RBP12.34□□□□□ -0.43
KRT4-201ENST00000548097 TMEM189A5PLL7 270 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 LINC01559Q495D7 138 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 C10orf91Q5T1B1 145 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 Q8NAQ8 132 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 OR2D3Q8NGH3 330 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 GSN-AS1Q9NRJ2 163 aa12.34□□□□□ -0.43
KRT4-201ENST00000548097 SCO1O75880 301 aa12.33□□□□□ -0.44
KRT4-201ENST00000548097 APOC3P02656 99 aa12.33□□□□□ -0.44
KRT4-201ENST00000548097 TDRG1Q3Y452 100 aa12.33□□□□□ -0.44
KRT4-201ENST00000548097 RNASE8Q8TDE3 154 aaKnown RBP12.33□□□□□ -0.44
KRT4-201ENST00000548097 SFRP2Q96HF1 295 aa12.33□□□□□ -0.44
KRT4-201ENST00000548097 BIN3Q9NQY0 253 aa12.33□□□□□ -0.44
KRT4-201ENST00000548097 PLAC8L1A1L4L8 177 aa12.32□□□□□ -0.44
KRT4-201ENST00000548097 GATCO43716 136 aaKnown RBP12.32□□□□□ -0.44
KRT4-201ENST00000548097 C11orf72Q8NBR9 251 aa12.32□□□□□ -0.44
KRT4-201ENST00000548097 KCNS1Q96KK3 526 aa12.32□□□□□ -0.44
KRT4-201ENST00000548097 NEU1Q99519 415 aa12.32□□□□□ -0.44
KRT4-201ENST00000548097 RPP21Q9H633 154 aaKnown RBP12.32□□□□□ -0.44
KRT4-201ENST00000548097 CARHSP1Q9Y2V2 147 aaKnown RBP12.32□□□□□ -0.44
KRT4-201ENST00000548097 IGHV3-16A0A0C4DH30 117 aa12.31□□□□□ -0.44
KRT4-201ENST00000548097 FAM231DQ6ZW35 169 aa12.31□□□□□ -0.44
KRT4-201ENST00000548097 TMEM263Q8WUH6 116 aaKnown RBP12.31□□□□□ -0.44
KRT4-201ENST00000548097 LINC00467Q9BRT7 94 aa12.31□□□□□ -0.44
KRT4-201ENST00000548097 MUC21A0A0G2JKD1 596 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 A0A0J9YWU9 116 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 MUC21A0A140T8X8 626 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 H3BVH4 76 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 MIFP14174 115 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 SSTP61278 116 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 PNRC1Q12796 327 aaPredicted RBP12.3□□□□□ -0.44
KRT4-201ENST00000548097 OR10G8Q8NGN5 311 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 V9GYV3 84 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 SMIM9A6NGZ8 99 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 RNASE3P12724 160 aaKnown RBP12.3□□□□□ -0.44
KRT4-201ENST00000548097 RNF212Q495C1 297 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.3□□□□□ -0.44
KRT4-201ENST00000548097 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 TPPP3Q9BW30 176 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 NOP10Q9NPE3 64 aaKnown RBP12.3□□□□□ -0.44
KRT4-201ENST00000548097 OSTCQ9NRP0 149 aa12.3□□□□□ -0.44
KRT4-201ENST00000548097 TRGV11A0A075B6L2 103 aa12.29□□□□□ -0.44
KRT4-201ENST00000548097 S100A4P26447 101 aaKnown RBP12.29□□□□□ -0.44
KRT4-201ENST00000548097 ASIPP42127 132 aa12.29□□□□□ -0.44
KRT4-201ENST00000548097 C15orf54Q8N8G6 183 aa12.29□□□□□ -0.44
KRT4-201ENST00000548097 ARMS2P0C7Q2 107 aa12.28□□□□□ -0.44
KRT4-201ENST00000548097 TCL1AP56279 114 aa12.28□□□□□ -0.44
KRT4-201ENST00000548097 CELA1Q9UNI1 258 aa12.28□□□□□ -0.44
KRT4-201ENST00000548097 ZNF415Q09FC8 603 aa12.27□□□□□ -0.44
KRT4-201ENST00000548097 CLRN3Q8NCR9 226 aa12.27□□□□□ -0.44
KRT4-201ENST00000548097 GTSF1Q8WW33 167 aa12.27□□□□□ -0.44
KRT4-201ENST00000548097 SNURFLB1AK76 121 aa12.27□□□□□ -0.45
KRT4-201ENST00000548097 NHLRC4P0CG21 123 aaPredicted RBP12.27□□□□□ -0.45
KRT4-201ENST00000548097 MUC4Q99102 2169 aa12.26□□□□□ -0.45
KRT4-201ENST00000548097 FAM222AQ5U5X8 452 aa12.26□□□□□ -0.45
KRT4-201ENST00000548097 ZNF493Q6ZR52 646 aa12.26□□□□□ -0.45
KRT4-201ENST00000548097 IL17DQ8TAD2 202 aa12.26□□□□□ -0.45
KRT4-201ENST00000548097 MRPL16Q9NX20 251 aaKnown RBP12.26□□□□□ -0.45
KRT4-201ENST00000548097 C9orf85Q96MD7 179 aa12.25□□□□□ -0.45
KRT4-201ENST00000548097 C7orf77A4D0Y5 90 aa12.25□□□□□ -0.45
KRT4-201ENST00000548097 ATRAIDQ6UW56 229 aa12.25□□□□□ -0.45
KRT4-201ENST00000548097 Q6ZTI0 123 aa12.25□□□□□ -0.45
KRT4-201ENST00000548097 OR10AG1Q8NH19 301 aa12.25□□□□□ -0.45
KRT4-201ENST00000548097 IGLC6P0CF74 106 aa12.24□□□□□ -0.45
KRT4-201ENST00000548097 RPS20P60866 119 aaKnown RBP12.24□□□□□ -0.45
KRT4-201ENST00000548097 SVBPQ8N300 66 aa12.24□□□□□ -0.45
KRT4-201ENST00000548097 FER1L6-AS1Q8NA97 138 aa12.24□□□□□ -0.45
KRT4-201ENST00000548097 RPS10P5Q9NQ39 176 aa12.24□□□□□ -0.45
KRT4-201ENST00000548097 IL36BQ9NZH7 164 aa12.24□□□□□ -0.45
KRT4-201ENST00000548097 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms