RNA–Protein interactions for RNA: ENST00000547562.5

BRF1-212, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 2,405 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-212ENST00000547562 NUDT3O95989 172 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 DEFB112Q30KQ8 113 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 Q8N8P6 123 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 FAM19A4Q96LR4 140 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 PEF1Q9UBV8 284 aaKnown RBP11.75□□□□□ -0.53
BRF1-212ENST00000547562 CSMD2Q7Z408 3487 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 IGKV3-7A0A075B6H7 116 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 IGLV2-18A0A075B6J9 118 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 IGHV4-59P01825 116 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 ORAOV1Q8WV07 137 aa11.75□□□□□ -0.53
BRF1-212ENST00000547562 WFDC3Q8IUB2 231 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 NRACQ8N912 160 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 SMPXQ9UHP9 88 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 USP24Q9UPU5 2620 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 A0A096LNT2 108 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 TRAV26-2A0A0B4J265 109 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 F6UB75 175 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 PSMB8P28062 276 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 BVES-AS1Q5T3Y7 98 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 C12orf54Q6X4T0 127 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 DEFB125Q8N687 156 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 OR1N2Q8NGR9 330 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 C18orf15Q96N68 181 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 COX11Q9Y6N1 276 aa11.74□□□□□ -0.53
BRF1-212ENST00000547562 FAM208BQ5VWN6 2430 aa11.73□□□□□ -0.53
BRF1-212ENST00000547562 ZFYVE26Q68DK2 2539 aa11.73□□□□□ -0.53
BRF1-212ENST00000547562 K7EMT4 169 aa11.73□□□□□ -0.53
BRF1-212ENST00000547562 Q6ZVH6 145 aa11.72□□□□□ -0.53
BRF1-212ENST00000547562 APRG1Q8IVJ8 170 aa11.72□□□□□ -0.53
BRF1-212ENST00000547562 TRBV7-9A0A0J9YWB2 115 aa11.72□□□□□ -0.53
BRF1-212ENST00000547562 C2orf91Q6ZV80 131 aa11.72□□□□□ -0.53
BRF1-212ENST00000547562 ZNF462Q96JM2 2506 aa11.72□□□□□ -0.53
BRF1-212ENST00000547562 J3QLI3 93 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 PRB1P04280 392 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 FGF6P10767 208 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 EDN2P20800 178 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 RNASE4P34096 147 aaKnown RBP11.71□□□□□ -0.53
BRF1-212ENST00000547562 TMEM158Q8WZ71 300 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 SELENOKQ9Y6D0 94 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 LRRK2Q5S007 2527 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 ZANQ9Y493 2812 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 POLQO75417 2590 aa11.71□□□□□ -0.53
BRF1-212ENST00000547562 SRD5A1P18405 259 aa11.71□□□□□ -0.54
BRF1-212ENST00000547562 ASIPP42127 132 aa11.71□□□□□ -0.54
BRF1-212ENST00000547562 ANXA2RQ3ZCQ2 193 aa11.71□□□□□ -0.54
BRF1-212ENST00000547562 MRAP2Q96G30 205 aa11.71□□□□□ -0.54
BRF1-212ENST00000547562 DKK2Q9UBU2 259 aa11.71□□□□□ -0.54
BRF1-212ENST00000547562 CENPEQ02224 2701 aa11.7□□□□□ -0.54
BRF1-212ENST00000547562 FBN2P35556 2912 aa11.7□□□□□ -0.54
BRF1-212ENST00000547562 S100A4P26447 101 aaKnown RBP11.7□□□□□ -0.54
BRF1-212ENST00000547562 TGFAP01135 160 aa11.7□□□□□ -0.54
BRF1-212ENST00000547562 KIR3DS1Q14943 382 aa11.7□□□□□ -0.54
BRF1-212ENST00000547562 M0R381 172 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 MED14OSP0DP75 135 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 COX6B1P14854 86 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 LAGE3Q14657 143 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 C10orf99Q6UWK7 81 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 MAPK1IP1LQ8NDC0 245 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 DCANP1Q8TF63 244 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 TMEM89A2RUT3 159 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 CD5LO43866 347 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 ID1P41134 155 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 ODF1Q14990 250 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 BOD1L2Q8IYS8 172 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 PHLDA3Q9Y5J5 127 aa11.69□□□□□ -0.54
BRF1-212ENST00000547562 SPRY2O43597 315 aa11.68□□□□□ -0.54
BRF1-212ENST00000547562 SAMD13Q5VXD3 122 aa11.68□□□□□ -0.54
BRF1-212ENST00000547562 PRSS1P07477 247 aa11.68□□□□□ -0.54
BRF1-212ENST00000547562 SMIM17P0DL12 118 aa11.68□□□□□ -0.54
BRF1-212ENST00000547562 ZMAT4Q9H898 229 aa11.68□□□□□ -0.54
BRF1-212ENST00000547562 DOPEY2Q9Y3R5 2298 aa11.67□□□□□ -0.54
BRF1-212ENST00000547562 TCTAP57738 103 aa11.67□□□□□ -0.54
BRF1-212ENST00000547562 DPH3P1Q9H4G8 78 aa11.67□□□□□ -0.54
BRF1-212ENST00000547562 UBR5O95071 2799 aaPredicted RBP11.67□□□□□ -0.54
BRF1-212ENST00000547562 KLLNB2CW77 178 aa11.67□□□□□ -0.54
BRF1-212ENST00000547562 GNRH2O43555 120 aa11.67□□□□□ -0.54
BRF1-212ENST00000547562 RNASE8Q8TDE3 154 aaKnown RBP11.67□□□□□ -0.54
BRF1-212ENST00000547562 BBC3Q96PG8 261 aaPredicted RBP11.67□□□□□ -0.54
BRF1-212ENST00000547562 CR1P17927 2039 aa11.67□□□□□ -0.54
BRF1-212ENST00000547562 MUC4Q99102 2169 aa11.67□□□□□ -0.54
BRF1-212ENST00000547562 TAX1BP3O14907 124 aa11.66□□□□□ -0.54
BRF1-212ENST00000547562 ATP5LO75964 103 aa11.66□□□□□ -0.54
BRF1-212ENST00000547562 RNASE3P12724 160 aaKnown RBP11.66□□□□□ -0.54
BRF1-212ENST00000547562 SRSF1Q07955 248 aaKnown RBP eCLIP11.66□□□□□ -0.54
BRF1-212ENST00000547562 C14orf178Q8N769 122 aaPredicted RBP11.66□□□□□ -0.54
BRF1-212ENST00000547562 FOXC2Q99958 501 aa11.66□□□□□ -0.54
BRF1-212ENST00000547562 SMIM2Q9BVW6 85 aa11.66□□□□□ -0.54
BRF1-212ENST00000547562 VPREB3Q9UKI3 123 aa11.66□□□□□ -0.54
BRF1-212ENST00000547562 PTPN13Q12923 2485 aa11.65□□□□□ -0.54
BRF1-212ENST00000547562 RNF223E7ERA6 249 aa11.65□□□□□ -0.54
BRF1-212ENST00000547562 A1L4Q6 167 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 CCL25O15444 150 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 FSHBP01225 129 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 NMUP48645 174 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 PTTG1IPP53801 180 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 RBX1P62877 108 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 UBE2V1Q13404 147 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 TMEM97Q5BJF2 176 aa11.65□□□□□ -0.55
BRF1-212ENST00000547562 PSMG4Q5JS54 123 aa11.65□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 131.3 ms