RNA–Protein interactions for RNA: ENST00000547018.5

SCAF11-209, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 5

Gene SCAF11, Length 3,271 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-209ENST00000547018 SNHG12Q9BXW3 62 aa9.67□□□□□ -0.86
SCAF11-209ENST00000547018 TRAV12-3A0A0B4J271 114 aa9.67□□□□□ -0.86
SCAF11-209ENST00000547018 M0QZK8 103 aa9.67□□□□□ -0.86
SCAF11-209ENST00000547018 IGHV4-31P0DP07 118 aa9.67□□□□□ -0.86
SCAF11-209ENST00000547018 DAZ1Q9NQZ3 744 aaKnown RBP9.67□□□□□ -0.86
SCAF11-209ENST00000547018 OR5AL1P0C617 328 aa9.67□□□□□ -0.86
SCAF11-209ENST00000547018 ORMDL3Q8N138 153 aa9.67□□□□□ -0.86
SCAF11-209ENST00000547018 HINT1P49773 126 aaPredicted RBP9.66□□□□□ -0.86
SCAF11-209ENST00000547018 SRSF2Q01130 221 aaKnown RBP9.66□□□□□ -0.86
SCAF11-209ENST00000547018 FAM104BQ5XKR9 115 aa9.66□□□□□ -0.86
SCAF11-209ENST00000547018 NDUFA4O00483 81 aa9.66□□□□□ -0.86
SCAF11-209ENST00000547018 Q8N976 141 aa9.66□□□□□ -0.86
SCAF11-209ENST00000547018 USMG5Q96IX5 58 aa9.66□□□□□ -0.86
SCAF11-209ENST00000547018 CLUHP3Q96NS8 147 aa9.66□□□□□ -0.86
SCAF11-209ENST00000547018 SIGLEC8Q9NYZ4 499 aa9.66□□□□□ -0.86
SCAF11-209ENST00000547018 CIDEAO60543 219 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 DSCR9P59020 149 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 Q6ZVH6 145 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 GPHB5Q86YW7 130 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 TMEM208Q9BTX3 173 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 CR1P17927 2039 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 PRM2P04554 102 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 ESDP10768 282 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 HNRNPA3P51991 378 aaKnown RBP9.65□□□□□ -0.86
SCAF11-209ENST00000547018 SLURP1P55000 103 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 C14orf178Q8N769 122 aaPredicted RBP9.65□□□□□ -0.86
SCAF11-209ENST00000547018 MAP1LC3CQ9BXW4 147 aa9.65□□□□□ -0.86
SCAF11-209ENST00000547018 IGHV4OR15-8A0A075B7B6 117 aa9.65□□□□□ -0.87
SCAF11-209ENST00000547018 A0A087WW49 117 aa9.65□□□□□ -0.87
SCAF11-209ENST00000547018 FAM74A4Q5TZK3 123 aa9.65□□□□□ -0.87
SCAF11-209ENST00000547018 TEX43Q6ZNM6 134 aa9.65□□□□□ -0.87
SCAF11-209ENST00000547018 IGHV7-4-1A0A0J9YVY3 117 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 C2orf70A6NJV1 201 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 IGLL1P15814 213 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 TMEM190Q8WZ59 177 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 PHLDA3Q9Y5J5 127 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 FAM231BA6NCW3 169 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 ANXA2RQ3ZCQ2 193 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 LBHQ53QV2 105 aaPredicted RBP9.64□□□□□ -0.87
SCAF11-209ENST00000547018 VPREB3Q9UKI3 123 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 F5H697 171 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 SYS1-DBNDD2H3BUS1 97 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 SMIM15Q7Z3B0 74 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 NEGR1Q7Z3B1 354 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 DPF1Q92782 380 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 KLK9Q9UKQ9 250 aa9.64□□□□□ -0.87
SCAF11-209ENST00000547018 M0R143 59 aa9.63□□□□□ -0.87
SCAF11-209ENST00000547018 KLF5Q13887 457 aaPredicted RBP9.63□□□□□ -0.87
SCAF11-209ENST00000547018 LINC00477Q96M19 166 aa9.63□□□□□ -0.87
SCAF11-209ENST00000547018 SMPXQ9UHP9 88 aa9.63□□□□□ -0.87
SCAF11-209ENST00000547018 SPINK13Q1W4C9 94 aa9.63□□□□□ -0.87
SCAF11-209ENST00000547018 C9orf139Q6ZV77 190 aa9.63□□□□□ -0.87
SCAF11-209ENST00000547018 MIEN1Q9BRT3 115 aa9.63□□□□□ -0.87
SCAF11-209ENST00000547018 JPT2Q9H910 190 aa9.63□□□□□ -0.87
SCAF11-209ENST00000547018 DLEU1O43261 78 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 RNASE8Q8TDE3 154 aaKnown RBP9.62□□□□□ -0.87
SCAF11-209ENST00000547018 HSBP1L1C9JCN9 74 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 PRSS1P07477 247 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 HOXD3P31249 432 aaPredicted RBP9.62□□□□□ -0.87
SCAF11-209ENST00000547018 STPG4Q8N801 248 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 A0A087WWL8 130 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 IGLV1-40P01703 118 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 GATA3P23771 443 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 RBX1P62877 108 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 CACNG7P62955 275 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 C19orf54Q5BKX5 351 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 Q6AWC8 147 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 YAE1D1Q9NRH1 226 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 OTOGQ6ZRI0 2925 aa9.62□□□□□ -0.87
SCAF11-209ENST00000547018 CD7P09564 240 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 KLHDC1Q8N7A1 406 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 SMR3AQ99954 134 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 C20orf202A1L168 122 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 FBLL1A6NHQ2 334 aaKnown RBP9.61□□□□□ -0.87
SCAF11-209ENST00000547018 PSMB8P28062 276 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 LEPP41159 167 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 RNF151Q2KHN1 245 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 MS4A6AQ9H2W1 248 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 U3KQE9 123 aa9.61□□□□□ -0.87
SCAF11-209ENST00000547018 KIR2DL5BA0A0G2JN68 375 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 KIR2DL5BA0A0G2JPC4 375 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 KNCNA6PVL3 124 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 TNFRSF6BO95407 300 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 RPS20P60866 119 aaKnown RBP9.6□□□□□ -0.87
SCAF11-209ENST00000547018 KIR2DL5AQ8N109 375 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 OR11H1Q8NG94 326 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 A0A087X0K7 114 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 IGLC6P0CF74 106 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 ZNF575Q86XF7 245 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 MUC4Q99102 2169 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 IGHV3OR16-12A0A075B7B8 117 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 A0A096LNT2 108 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 TCF21O43680 179 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 IGLC3P0DOY3 106 aa9.6□□□□□ -0.87
SCAF11-209ENST00000547018 CHCHD1Q96BP2 118 aaKnown RBP9.6□□□□□ -0.87
SCAF11-209ENST00000547018 TRBV6-1A0A0K0K1D8 114 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 CBY3A6NI87 242 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 TCTEX1D4Q5JR98 221 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 KLHL30-AS1Q8NEE0 82 aa9.59□□□□□ -0.87
SCAF11-209ENST00000547018 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 91.6 ms