RNA–Protein interactions for RNA: ENST00000546997.1

BRF1-208, Transcript of BRF1, RNA polymerase III transcription initiation factor subunit, humanhuman

TSL 2

Gene BRF1, Length 1,999 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRF1-208ENST00000546997 SGK494Q96LW2 274 aa12.69□□□□□ -0.38
BRF1-208ENST00000546997 HIGD1AQ9Y241 93 aa12.69□□□□□ -0.38
BRF1-208ENST00000546997 NIPBLQ6KC79 2804 aaeCLIP12.69□□□□□ -0.38
BRF1-208ENST00000546997 K7EQM0 130 aa12.69□□□□□ -0.38
BRF1-208ENST00000546997 HBDP02042 147 aa12.69□□□□□ -0.38
BRF1-208ENST00000546997 IGF1P05019 195 aa12.69□□□□□ -0.38
BRF1-208ENST00000546997 LYZP61626 148 aa12.69□□□□□ -0.38
BRF1-208ENST00000546997 FOXE3Q13461 319 aa12.69□□□□□ -0.38
BRF1-208ENST00000546997 TRAV41A0A0B4J266 112 aa12.68□□□□□ -0.38
BRF1-208ENST00000546997 ARMS2P0C7Q2 107 aa12.68□□□□□ -0.38
BRF1-208ENST00000546997 CRIP2P52943 208 aaPredicted RBP12.68□□□□□ -0.38
BRF1-208ENST00000546997 TMEM86BQ8N661 226 aa12.68□□□□□ -0.38
BRF1-208ENST00000546997 FAM110DQ8TAY7 271 aaPredicted RBP12.68□□□□□ -0.38
BRF1-208ENST00000546997 J3QR89 54 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 SAMD5Q5TGI4 173 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 SLC25A39Q9BZJ4 359 aaPredicted RBP12.67□□□□□ -0.38
BRF1-208ENST00000546997 THYN1Q9P016 225 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 SNAI2O43623 268 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 HLA-DRB4P13762 266 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 ZNF414Q96IQ9 312 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 SIGMAR1Q99720 223 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 ZNF702PQ9H963 129 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 S4R3C0 116 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 HLA-DRB4X5D2U9 266 aa12.67□□□□□ -0.38
BRF1-208ENST00000546997 IFI27P40305 119 aaPredicted RBP12.66□□□□□ -0.38
BRF1-208ENST00000546997 MFAP4P55083 255 aa12.66□□□□□ -0.38
BRF1-208ENST00000546997 SCGB2A2Q13296 93 aa12.66□□□□□ -0.38
BRF1-208ENST00000546997 ORMDL3Q8N138 153 aa12.66□□□□□ -0.38
BRF1-208ENST00000546997 OR8A1Q8NGG7 326 aa12.66□□□□□ -0.38
BRF1-208ENST00000546997 LINC01546A6NGU7 62 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 ZNF785A8K8V0 405 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 F8W735 103 aaPredicted RBP12.65□□□□□ -0.38
BRF1-208ENST00000546997 BMI1P35226 326 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 FAM104BQ5XKR9 115 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 FOXI2Q6ZQN5 318 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 PRNTQ86SH4 94 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 ZNF491Q8N8L2 437 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 IFI27L1Q96BM0 104 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 FBLL1A6NHQ2 334 aaKnown RBP12.65□□□□□ -0.38
BRF1-208ENST00000546997 GNG7O60262 68 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 PRELID3AQ96N28 172 aa12.65□□□□□ -0.38
BRF1-208ENST00000546997 A0A1B0GV72 72 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 WI2-2373I1.2A0A1W2PRP0 233 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 F8W1H4 67 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 ZNF207O43670 478 aaKnown RBP12.64□□□□□ -0.39
BRF1-208ENST00000546997 PPIFP30405 207 aaKnown RBP12.64□□□□□ -0.39
BRF1-208ENST00000546997 CACNG7P62955 275 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 CD300EQ496F6 205 aaPredicted RBP12.64□□□□□ -0.39
BRF1-208ENST00000546997 PRR31Q5SQ13 230 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 GOLT1AQ6ZVE7 132 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 ZC2HC1AQ96GY0 325 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 VGLL1Q99990 258 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 C21orf62Q9NYP8 219 aa12.64□□□□□ -0.39
BRF1-208ENST00000546997 SERTM2A0A1B0GWG4 89 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 RNF125Q96EQ8 232 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 SHANK2-AS3Q9BTD1 123 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 ZMAT4Q9H898 229 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 JMJD1CQ15652 2540 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 IL4P05112 153 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 HILS1P60008 231 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 CFHR3Q02985 330 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 COX8CQ7Z4L0 72 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 C2CD3Q4AC94 2353 aa12.63□□□□□ -0.39
BRF1-208ENST00000546997 H3BRN7 92 aa12.62□□□□□ -0.39
BRF1-208ENST00000546997 KLK9Q2XQG4 91 aa12.62□□□□□ -0.39
BRF1-208ENST00000546997 C10orf99Q6UWK7 81 aa12.62□□□□□ -0.39
BRF1-208ENST00000546997 ZNF418Q8TF45 676 aaPredicted RBP12.62□□□□□ -0.39
BRF1-208ENST00000546997 TM2D2Q9BX73 214 aa12.62□□□□□ -0.39
BRF1-208ENST00000546997 ZNF580Q9UK33 172 aa12.62□□□□□ -0.39
BRF1-208ENST00000546997 KLK9Q9UKQ9 250 aa12.62□□□□□ -0.39
BRF1-208ENST00000546997 PSG8Q9UQ74 426 aa12.62□□□□□ -0.39
BRF1-208ENST00000546997 TIMM8BQ9Y5J9 83 aaPredicted RBP12.62□□□□□ -0.39
BRF1-208ENST00000546997 TRBV19A0A075B6N1 114 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 D6R8Y8 96 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 H3BTX0 84 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 TAL2Q16559 108 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 C15orf32Q32M92 178 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 SPATA25Q9BR10 227 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 TRAV8-1A0A0A6YYK1 113 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 IGHV3-23P01764 117 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 RNASE1P07998 156 aaKnown RBP12.61□□□□□ -0.39
BRF1-208ENST00000546997 LCNL1Q6ZST4 164 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 Q8N2B8 174 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 RAB37Q96AX2 223 aa12.61□□□□□ -0.39
BRF1-208ENST00000546997 TEX48A0A1B0GUV7 120 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 AZU1P20160 251 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 SRSF2Q01130 221 aaKnown RBP12.6□□□□□ -0.39
BRF1-208ENST00000546997 PHLDA1Q8WV24 401 aaPredicted RBP12.6□□□□□ -0.39
BRF1-208ENST00000546997 KLK15Q9H2R5 256 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 IGLV1-40P01703 118 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 CTSGP08311 255 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 EVI2AP22794 236 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 FCGR2BP31994 310 aaPredicted RBP12.6□□□□□ -0.39
BRF1-208ENST00000546997 RPL24P83731 157 aaKnown RBP12.6□□□□□ -0.39
BRF1-208ENST00000546997 FAM106AQ4KMX7 169 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 Q6ZSV7 163 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 S100A7AQ86SG5 101 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 ZFAND3Q9H8U3 227 aa12.6□□□□□ -0.39
BRF1-208ENST00000546997 E9PLD3 99 aa12.59□□□□□ -0.39
BRF1-208ENST00000546997 CRLF1O75462 422 aa12.59□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms