RNA–Protein interactions for RNA: ENST00000546386.1

CCDC38-202, Transcript of coiled-coil domain containing 38, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CCDC38, Length 2,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC38-202ENST00000546386 OR1N2Q8NGR9 330 aa8.97□□□□□ -0.97
CCDC38-202ENST00000546386 FOXC2Q99958 501 aa8.97□□□□□ -0.97
CCDC38-202ENST00000546386 S100A8P05109 93 aa8.97□□□□□ -0.97
CCDC38-202ENST00000546386 TMEM61Q8N0U2 210 aa8.97□□□□□ -0.97
CCDC38-202ENST00000546386 TMEM18Q96B42 140 aa8.97□□□□□ -0.97
CCDC38-202ENST00000546386 URB1-AS1Q96HZ7 61 aa8.97□□□□□ -0.97
CCDC38-202ENST00000546386 PMCHL2Q9BQD1 86 aa8.97□□□□□ -0.97
CCDC38-202ENST00000546386 MUC4Q99102 2169 aa8.96□□□□□ -0.97
CCDC38-202ENST00000546386 CD5LO43866 347 aa8.96□□□□□ -0.97
CCDC38-202ENST00000546386 ELANEP08246 267 aa8.96□□□□□ -0.97
CCDC38-202ENST00000546386 NIT1Q86X76 327 aa8.96□□□□□ -0.97
CCDC38-202ENST00000546386 RAX2Q96IS3 184 aa8.96□□□□□ -0.97
CCDC38-202ENST00000546386 LINC00587B1AMM8 73 aa8.96□□□□□ -0.98
CCDC38-202ENST00000546386 ZFAND2AQ8N6M9 145 aa8.96□□□□□ -0.98
CCDC38-202ENST00000546386 JPT2Q9H910 190 aa8.96□□□□□ -0.98
CCDC38-202ENST00000546386 MAJINQ3KP22 176 aa8.95□□□□□ -0.98
CCDC38-202ENST00000546386 ANXA2RQ3ZCQ2 193 aa8.95□□□□□ -0.98
CCDC38-202ENST00000546386 PPP1R14DQ9NXH3 145 aa8.95□□□□□ -0.98
CCDC38-202ENST00000546386 LOC102724200A0A096LPH7 203 aaPredicted RBP8.95□□□□□ -0.98
CCDC38-202ENST00000546386 EREGO14944 169 aa8.95□□□□□ -0.98
CCDC38-202ENST00000546386 DEFB131AP59861 70 aa8.95□□□□□ -0.98
CCDC38-202ENST00000546386 SMIM12Q96EX1 92 aa8.95□□□□□ -0.98
CCDC38-202ENST00000546386 LINC00477Q96M19 166 aa8.95□□□□□ -0.98
CCDC38-202ENST00000546386 TRAV9-1A0A075B6T8 112 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 HSBP1O75506 76 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 SMIM6P0DI80 62 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 CD300EQ496F6 205 aaPredicted RBP8.94□□□□□ -0.98
CCDC38-202ENST00000546386 SPATA3Q8NHX4 192 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 WFDC10AQ9H1F0 79 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 LINC01619G3V211 115 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 MT-ND6P03923 174 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 S100A4P26447 101 aaKnown RBP8.94□□□□□ -0.98
CCDC38-202ENST00000546386 S100A7P31151 101 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 BMI1P35226 326 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 IFI27P40305 119 aaPredicted RBP8.94□□□□□ -0.98
CCDC38-202ENST00000546386 KLF5Q13887 457 aaPredicted RBP8.94□□□□□ -0.98
CCDC38-202ENST00000546386 COA6Q5JTJ3 125 aaKnown RBP8.94□□□□□ -0.98
CCDC38-202ENST00000546386 C9orf47Q6ZRZ4 202 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 TP73-AS1Q9UF72 201 aa8.94□□□□□ -0.98
CCDC38-202ENST00000546386 SPANXN1Q5VSR9 72 aa8.93□□□□□ -0.98
CCDC38-202ENST00000546386 NBEAL1Q6ZS30 2694 aa8.93□□□□□ -0.98
CCDC38-202ENST00000546386 CT83Q5H943 113 aa8.93□□□□□ -0.98
CCDC38-202ENST00000546386 LINC00528Q8N1L1 170 aa8.93□□□□□ -0.98
CCDC38-202ENST00000546386 OR9G4Q8NGQ1 327 aa8.93□□□□□ -0.98
CCDC38-202ENST00000546386 BORCS7Q96B45 105 aa8.93□□□□□ -0.98
CCDC38-202ENST00000546386 IGHV3OR16-12A0A075B7B8 117 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 RIGQ13278 110 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 GFRA4Q9GZZ7 299 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 PAFAH1B2P68402 229 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 MRPL51Q4U2R6 128 aaKnown RBP8.92□□□□□ -0.98
CCDC38-202ENST00000546386 MYOZ3Q8TDC0 251 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 DYNLRB2Q8TF09 96 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 KCNS1Q96KK3 526 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 PAM16Q9Y3D7 125 aa8.92□□□□□ -0.98
CCDC38-202ENST00000546386 CCL24O00175 119 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 ZNF324O75467 553 aaPredicted RBP8.91□□□□□ -0.98
CCDC38-202ENST00000546386 NPYP01303 97 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 CKS2P33552 79 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 SPATA12Q7Z6I5 190 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 ZNF664Q8N3J9 261 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 C14orf178Q8N769 122 aaPredicted RBP8.91□□□□□ -0.98
CCDC38-202ENST00000546386 A0A087WWL8 130 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 TRBV6-1A0A0K0K1D8 114 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 CD7P09564 240 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 KRTAP10-3P60369 221 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 Q0VG73 95 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 ATP5L2Q7Z4Y8 100 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 Q8N2B8 174 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 MDFICQ9P1T7 246 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 ZNF580Q9UK33 172 aa8.91□□□□□ -0.98
CCDC38-202ENST00000546386 CYSRT1A8MQ03 144 aa8.9□□□□□ -0.98
CCDC38-202ENST00000546386 IGLC6P0CF74 106 aa8.9□□□□□ -0.98
CCDC38-202ENST00000546386 SNRPD3P62318 126 aaKnown RBP8.9□□□□□ -0.98
CCDC38-202ENST00000546386 JOSD1Q15040 202 aaPredicted RBP8.9□□□□□ -0.98
CCDC38-202ENST00000546386 EBLN2Q6P2I7 272 aa8.9□□□□□ -0.98
CCDC38-202ENST00000546386 PRSS3P2Q8NHM4 247 aa8.9□□□□□ -0.98
CCDC38-202ENST00000546386 K7EMT4 169 aa8.9□□□□□ -0.99
CCDC38-202ENST00000546386 FAM74A4Q5TZK3 123 aa8.9□□□□□ -0.99
CCDC38-202ENST00000546386 NEGR1Q7Z3B1 354 aa8.9□□□□□ -0.99
CCDC38-202ENST00000546386 IGHV3-73A0A0B4J1V6 119 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 RBAKDNA6NC62 111 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 K7EQG2 157 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 BRI3O95415 125 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 C3orf79P0CE67 100 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 ID1P41134 155 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 ZNF418Q8TF45 676 aaPredicted RBP8.89□□□□□ -0.99
CCDC38-202ENST00000546386 C4orf3Q8WVX3 66 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 PRELID3AQ96N28 172 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 IGHV1-24A0A0C4DH33 117 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 OVOL1O14753 267 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 MGPP08493 103 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 LINC00614P0C842 121 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 RBMY1A1P0DJD3 496 aaKnown RBP8.89□□□□□ -0.99
CCDC38-202ENST00000546386 RBMY1CP0DJD4 496 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 RBMY1FQ15415 496 aaKnown RBP8.89□□□□□ -0.99
CCDC38-202ENST00000546386 OR10J3Q5JRS4 329 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 FAM104BQ5XKR9 115 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 C18orf15Q96N68 181 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 ANK2Q01484 3957 aa8.89□□□□□ -0.99
CCDC38-202ENST00000546386 SAP30O75446 220 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 55.7 ms