RNA–Protein interactions for RNA: ENST00000546276.5

NPC1L1-204, Transcript of NPC1 like intracellular cholesterol transporter 1, humanhuman

TSL 1 (best) BASIC

Gene NPC1L1, Length 4,826 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1L1-204ENST00000546276 PRSS33Q8NF86 280 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 MED13LQ71F56 2210 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 CACNA1BQ00975 2339 aa9.59□□□□□ -0.87
NPC1L1-204ENST00000546276 IGHV1-69DA0A0B4J2H0 117 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 KNCNA6PVL3 124 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 IGHV1-69P01742 117 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 FOXE3Q13461 319 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 MSRB2Q9Y3D2 182 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 DEFB131AP59861 70 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 DKK4Q9UBT3 224 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 IGLV2-23P01705 113 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 CMC4P56277 68 aaPredicted RBP9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 MRPL36Q9P0J6 103 aaKnown RBP9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 NDUFA12Q9UI09 145 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 LENEPQ9Y5L5 61 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 IGFL2Q6UWQ7 119 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 MSRB1Q9NZV6 116 aa9.58□□□□□ -0.88
NPC1L1-204ENST00000546276 GAGE2AQ6NT46 116 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 ZNF625Q96I27 306 aaPredicted RBP9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 C19orf71A6NCJ1 209 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 IGLV2-8P01709 118 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 C11orf44Q8N8P7 122 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 C2orf16Q68DN1 1984 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 HIGD1BQ9P298 99 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 E7EUB6 86 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 PROP1O75360 226 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 HTN3P15516 51 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 S100A7L2Q5SY68 101 aa9.57□□□□□ -0.88
NPC1L1-204ENST00000546276 NOTCH3Q9UM47 2321 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 A0A1B0GXF2 115 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 HIST1H4AP62805 103 aaKnown RBP9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 C11orf68Q9H3H3 251 aaKnown RBP9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 IGLV11-55A0A075B6I3 123 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 FXYD2P54710 66 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 FOXI2Q6ZQN5 318 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 LTBP2Q14767 1821 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 SH2D6Q7Z4S9 175 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 C1QTNF4Q9BXJ3 329 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 TMEM131Q92545 1883 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 PCNX3Q9H6A9 2034 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 TRBV6-1A0A0K0K1D8 114 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 NPBQ8NG41 125 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 UBE2E2Q96LR5 201 aa9.56□□□□□ -0.88
NPC1L1-204ENST00000546276 TRAV12-2A0A075B6T6 113 aa9.55□□□□□ -0.88
NPC1L1-204ENST00000546276 C6orf226Q5I0X4 101 aa9.55□□□□□ -0.88
NPC1L1-204ENST00000546276 IGHV7-4-1A0A0J9YVY3 117 aa9.55□□□□□ -0.88
NPC1L1-204ENST00000546276 INAFM2P0DMQ5 153 aa9.55□□□□□ -0.88
NPC1L1-204ENST00000546276 SRSF2Q01130 221 aaKnown RBP9.55□□□□□ -0.88
NPC1L1-204ENST00000546276 TEX22C9J3V5 150 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 K7ENP7 123 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.54□□□□□ -0.881e-6■■■□□ 16.8
NPC1L1-204ENST00000546276 GNRH2O43555 120 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 JPT2Q9H910 190 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 EDA2RQ9HAV5 297 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 WI2-2373I1.2A0A1W2PRP0 233 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 CRYGCP07315 174 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 IFITM1P13164 125 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 WT1P19544 449 aaPredicted RBP9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 GNLYP22749 145 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 EIF4EBP1Q13541 118 aaPredicted RBP9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 MSMBP08118 114 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 CTSGP08311 255 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 CFC1BP0CG36 223 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 CFC1P0CG37 223 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 TTTY13Q9BZ97 58 aa9.54□□□□□ -0.88
NPC1L1-204ENST00000546276 CTRLP40313 264 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 SPRY4Q9C004 299 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 ARFGEF3Q5TH69 2177 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 IGKV1D-37A0A075B6S9 117 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 MSMPQ1L6U9 139 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 GDF5OSQ5U4N7 250 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 SPATA12Q7Z6I5 190 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 NTN5Q8WTR8 489 aaPredicted RBP9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 TP53TG3Q9ULZ0 132 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 HOXB4P17483 251 aaPredicted RBP9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 RHOHQ15669 191 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 F6UB75 175 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 C9orf153Q5TBE3 101 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 KLHL30-AS1Q8NEE0 82 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 DNAJC30Q96LL9 226 aa9.53□□□□□ -0.88
NPC1L1-204ENST00000546276 CARD19Q96LW7 228 aa9.52□□□□□ -0.88
NPC1L1-204ENST00000546276 IGHV7-81A0A0B4J1V7 117 aa9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 IGHV3-16A0A0C4DH30 117 aa9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 PIP4P1Q86T03 277 aa9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 RPL39LQ96EH5 51 aaKnown RBP9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 TNRC6AQ8NDV7 1962 aaKnown RBP9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 CGB3P0DN86 165 aa9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 CGB7P0DN87 165 aa9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 IGFBPL1Q8WX77 278 aa9.52□□□□□ -0.89
NPC1L1-204ENST00000546276 SPRY2O43597 315 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 BUB3O43684 328 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 IGLV1-47P01700 117 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 WFDC2Q14508 124 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 LINC01356Q8N9X3 169 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 MBD6Q96DN6 1003 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 NCKAP5O14513 1909 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 ADAMTS9Q9P2N4 1935 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 H3BUA1 57 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 PCNX2A6NKB5 2137 aa9.51□□□□□ -0.89
NPC1L1-204ENST00000546276 GATA3P23771 443 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms