RNA–Protein interactions for RNA: ENST00000545083.1

CHD4-212, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 511 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-212ENST00000545083 MIC13Q5XKP0 118 aa6.1□□□□□ -1.43
CHD4-212ENST00000545083 DAZ4Q86SG3 579 aaKnown RBP6.1□□□□□ -1.43
CHD4-212ENST00000545083 TMEM183AQ8IXX5 376 aa6.1□□□□□ -1.43
CHD4-212ENST00000545083 DNAJC30Q96LL9 226 aa6.1□□□□□ -1.43
CHD4-212ENST00000545083 SPXQ9BT56 116 aa6.1□□□□□ -1.43
CHD4-212ENST00000545083 DAZ3Q9NR90 486 aaKnown RBP6.1□□□□□ -1.43
CHD4-212ENST00000545083 PRELID1Q9Y255 219 aa6.1□□□□□ -1.43
CHD4-212ENST00000545083 ALG5Q9Y673 324 aa6.1□□□□□ -1.43
CHD4-212ENST00000545083 C7orf66A4D0T2 115 aa6.09□□□□□ -1.43
CHD4-212ENST00000545083 RNF222A6NCQ9 220 aa6.09□□□□□ -1.43
CHD4-212ENST00000545083 PYYP10082 97 aa6.09□□□□□ -1.43
CHD4-212ENST00000545083 CAMLGP49069 296 aa6.09□□□□□ -1.43
CHD4-212ENST00000545083 TMEM78Q5T7P6 136 aa6.09□□□□□ -1.43
CHD4-212ENST00000545083 TOMM5Q8N4H5 51 aa6.09□□□□□ -1.43
CHD4-212ENST00000545083 TRAV8-3A0A0A6YYJ7 113 aa6.08□□□□□ -1.44
CHD4-212ENST00000545083 IFNA7P01567 189 aa6.08□□□□□ -1.44
CHD4-212ENST00000545083 PFN1P07737 140 aaKnown RBP6.08□□□□□ -1.44
CHD4-212ENST00000545083 HIST1H1EP10412 219 aaKnown RBP6.08□□□□□ -1.44
CHD4-212ENST00000545083 UBE2MP61081 183 aaKnown RBP6.08□□□□□ -1.44
CHD4-212ENST00000545083 FAM122CQ6P4D5 195 aa6.08□□□□□ -1.44
CHD4-212ENST00000545083 SLC25A29Q8N8R3 303 aa6.08□□□□□ -1.44
CHD4-212ENST00000545083 Q8N976 141 aa6.08□□□□□ -1.44
CHD4-212ENST00000545083 TMEM14CQ9P0S9 112 aa6.08□□□□□ -1.44
CHD4-212ENST00000545083 TIMM9Q9Y5J7 89 aa6.08□□□□□ -1.44
CHD4-212ENST00000545083 TRGV11A0A075B6L2 103 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 GNRH2O43555 120 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 TSC22D2O75157 780 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 H2AFB2P0C5Z0 115 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 ZNF138P52744 262 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 RAB14P61106 215 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 PDE6HQ13956 83 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 ZNF266Q14584 549 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 Q6AWC8 147 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 Q6ZRG5 221 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 Q6ZRU5 148 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 OR1L4Q8NGR5 311 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 ATP6V0E2Q8NHE4 81 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 ASB13Q8WXK3 278 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 GGACTQ9BVM4 153 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 GTSF1LQ9H1H1 148 aa6.07□□□□□ -1.44
CHD4-212ENST00000545083 GPN1Q9HCN4 374 aaPredicted RBP6.07□□□□□ -1.44
CHD4-212ENST00000545083 IGHV3-73A0A0B4J1V6 119 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 TRBV7-9A0A0J9YWB2 115 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 M0R2P5 195 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 SCGB1D1O95968 90 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 TCRBP04435 133 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 FAUP35544 74 aaKnown RBP6.06□□□□□ -1.44
CHD4-212ENST00000545083 AAMDCQ9H7C9 122 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 SLC39A9Q9NUM3 307 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 HSPB11Q9Y547 144 aa6.06□□□□□ -1.44
CHD4-212ENST00000545083 IGKV2D-24A0A075B6R9 120 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 C9orf170A2RU37 121 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 LINC00862A6NCI5 91 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 FBLL1A6NHQ2 334 aaKnown RBP6.05□□□□□ -1.44
CHD4-212ENST00000545083 PANO1I0J062 215 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 GAS8-AS1O95177 125 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 TAS2R30P59541 319 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 RHOHQ15669 191 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 GCSAMLQ5JQS6 135 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 FAM159AQ6UWV7 190 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 DPPA3Q6W0C5 159 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 PFDN5Q99471 154 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 PAXXQ9BUH6 204 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 NUDT15Q9NV35 164 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 NAGKQ9UJ70 344 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 RPH3ALQ9UNE2 315 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 WDR83OSQ9Y284 106 aa6.05□□□□□ -1.44
CHD4-212ENST00000545083 TRBV6-4A0A1B0GX49 114 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 GGTLC3B5MD39 225 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 SSNA1O43805 119 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 RPL29P47914 159 aaKnown RBP6.04□□□□□ -1.44
CHD4-212ENST00000545083 CAV2P51636 162 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 VWC2Q2TAL6 325 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 CFAP126Q5VTH2 177 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 C9orf62Q8N4C0 152 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 C12orf45Q8N5I9 185 aaPredicted RBP6.04□□□□□ -1.44
CHD4-212ENST00000545083 FAM167A-AS1Q96KT0 104 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 SLC25A21Q9BQT8 299 aaPredicted RBP6.04□□□□□ -1.44
CHD4-212ENST00000545083 PRADC1Q9BSG0 188 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 SLC25A2Q9BXI2 301 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 COX11Q9Y6N1 276 aa6.04□□□□□ -1.44
CHD4-212ENST00000545083 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.04□□□□□ -1.44
CHD4-212ENST00000545083 C5orf51A6NDU8 294 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 MBPP02686 304 aaPredicted RBP6.03□□□□□ -1.44
CHD4-212ENST00000545083 TYMSP04818 313 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 NBEAP1P0C6P0 100 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 LINC00694P0DN24 101 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 RAB31Q13636 194 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 IAH1Q2TAA2 248 aaPredicted RBP6.03□□□□□ -1.44
CHD4-212ENST00000545083 CLLU1Q5K131 121 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 TEX261Q6UWH6 196 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 SUN5Q8TC36 379 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 PHYHIPLQ96FC7 376 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 KRTAP9-2Q9BYQ4 174 aa6.03□□□□□ -1.44
CHD4-212ENST00000545083 TRAV6A0A075B6T7 132 aa6.02□□□□□ -1.45
CHD4-212ENST00000545083 TRAV8-1A0A0A6YYK1 113 aa6.02□□□□□ -1.45
CHD4-212ENST00000545083 UBE2L5PA0A1B0GUS4 154 aa6.02□□□□□ -1.45
CHD4-212ENST00000545083 CST7O76096 145 aa6.02□□□□□ -1.45
CHD4-212ENST00000545083 GIPP09681 153 aaPredicted RBP6.02□□□□□ -1.45
CHD4-212ENST00000545083 BTCP35070 178 aa6.02□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms