RNA–Protein interactions for RNA: ENST00000543185.5

HDAC4-215, Transcript of histone deacetylase 4, humanhuman

TSL 5 BASIC

Gene HDAC4, Length 8,990 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-215ENST00000543185 CCL25O15444 150 aa15.5■□□□□ 0.07
HDAC4-215ENST00000543185 MUC6Q6W4X9 2439 aa15.5■□□□□ 0.07
HDAC4-215ENST00000543185 NSUN5P1Q3KNT7 163 aa15.5■□□□□ 0.07
HDAC4-215ENST00000543185 Q8TCH9 128 aa15.5■□□□□ 0.07
HDAC4-215ENST00000543185 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.5■□□□□ 0.07
HDAC4-215ENST00000543185 ICOSQ9Y6W8 199 aa15.5■□□□□ 0.07
HDAC4-215ENST00000543185 C9JQL5 133 aa15.5■□□□□ 0.07
HDAC4-215ENST00000543185 RPL35AP18077 110 aaKnown RBP15.5■□□□□ 0.07
HDAC4-215ENST00000543185 SAA4P35542 130 aa15.49■□□□□ 0.07
HDAC4-215ENST00000543185 ZFP36L1Q07352 338 aaKnown RBP15.49■□□□□ 0.07
HDAC4-215ENST00000543185 JMJD7-PLA2G4BH0Y9G9 81 aa15.49■□□□□ 0.07
HDAC4-215ENST00000543185 C5orf47Q569G3 176 aa15.49■□□□□ 0.07
HDAC4-215ENST00000543185 K7EM74 188 aa15.49■□□□□ 0.07
HDAC4-215ENST00000543185 IGHV3-53P01767 116 aa15.49■□□□□ 0.07
HDAC4-215ENST00000543185 KLF2Q9Y5W3 355 aaPredicted RBP15.49■□□□□ 0.07
HDAC4-215ENST00000543185 LINC01356Q8N9X3 169 aa15.49■□□□□ 0.07
HDAC4-215ENST00000543185 Q71RC1 249 aaPredicted RBP15.48■□□□□ 0.07
HDAC4-215ENST00000543185 DEFB130BP0DP73 79 aa15.48■□□□□ 0.07
HDAC4-215ENST00000543185 DEFB130AP0DP74 79 aa15.48■□□□□ 0.07
HDAC4-215ENST00000543185 DAD1P61803 113 aa15.48■□□□□ 0.07
HDAC4-215ENST00000543185 UBE2E1P51965 193 aa15.48■□□□□ 0.07
HDAC4-215ENST00000543185 TEX48A0A1B0GUV7 120 aa15.48■□□□□ 0.07
HDAC4-215ENST00000543185 FXYD5Q96DB9 178 aa15.48■□□□□ 0.07
HDAC4-215ENST00000543185 EFNA2O43921 213 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 VWC2Q2TAL6 325 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 PRSS29PA6NIE9 313 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 NTN5Q8WTR8 489 aaPredicted RBP15.47■□□□□ 0.07
HDAC4-215ENST00000543185 ZNF747Q9BV97 191 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 CR1LQ2VPA4 569 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 CPAMD8Q8IZJ3 1885 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 NDUFS5O43920 106 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 LINC00311Q8N616 119 aa15.47■□□□□ 0.07
HDAC4-215ENST00000543185 AMTNQ6UX39 209 aa15.46■□□□□ 0.07
HDAC4-215ENST00000543185 PSMB8P28062 276 aa15.46■□□□□ 0.07
HDAC4-215ENST00000543185 SH2D6Q7Z4S9 175 aa15.46■□□□□ 0.07
HDAC4-215ENST00000543185 HIVEP2P31629 2446 aa15.46■□□□□ 0.07
HDAC4-215ENST00000543185 TINCRA0A1B0GVN0 87 aa15.45■□□□□ 0.06
HDAC4-215ENST00000543185 SPANXB1Q9NS25 103 aaPredicted RBP15.45■□□□□ 0.06
HDAC4-215ENST00000543185 WFDC9Q8NEX5 89 aa15.45■□□□□ 0.06
HDAC4-215ENST00000543185 A0A0G2JRQ6 117 aa15.45■□□□□ 0.06
HDAC4-215ENST00000543185 C8orf31Q8N9H6 132 aa15.45■□□□□ 0.06
HDAC4-215ENST00000543185 MBD3L4A6NDZ8 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-215ENST00000543185 MBD3L3A6NE82 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-215ENST00000543185 MBD3L5A6NJ08 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-215ENST00000543185 MBD3L2Q8NHZ7 208 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-215ENST00000543185 H3BUA1 57 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 OVOL3O00110 214 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 PTPRSQ13332 1948 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 NDUFB1O75438 58 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 PRB3Q04118 309 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-215ENST00000543185 H3BT86 120 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 TRAV26-2A0A0B4J265 109 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 TFF1P04155 84 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 LTBRP36941 435 aa15.44■□□□□ 0.06
HDAC4-215ENST00000543185 ATP5EP56381 51 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-215ENST00000543185 OPRPNQ99935 248 aaPredicted RBP15.44■□□□□ 0.06
HDAC4-215ENST00000543185 SPINK13Q1W4C9 94 aa15.43■□□□□ 0.06
HDAC4-215ENST00000543185 ZFP2Q6ZN57 461 aa15.43■□□□□ 0.06
HDAC4-215ENST00000543185 TAX1BP3O14907 124 aa15.43■□□□□ 0.06
HDAC4-215ENST00000543185 LINC01619G3V211 115 aa15.43■□□□□ 0.06
HDAC4-215ENST00000543185 F5H768 121 aa15.43■□□□□ 0.06
HDAC4-215ENST00000543185 C5orf63A6NC05 138 aa15.42■□□□□ 0.06
HDAC4-215ENST00000543185 LINC01620Q4KN68 170 aa15.42■□□□□ 0.06
HDAC4-215ENST00000543185 DKK2Q9UBU2 259 aa15.42■□□□□ 0.06
HDAC4-215ENST00000543185 DAZ2Q13117 558 aaKnown RBP15.42■□□□□ 0.06
HDAC4-215ENST00000543185 DAZ4Q86SG3 579 aaKnown RBP15.42■□□□□ 0.06
HDAC4-215ENST00000543185 DAZ3Q9NR90 486 aaKnown RBP15.42■□□□□ 0.06
HDAC4-215ENST00000543185 CRYGCP07315 174 aa15.42■□□□□ 0.06
HDAC4-215ENST00000543185 VOPP1Q96AW1 172 aa15.42■□□□□ 0.06
HDAC4-215ENST00000543185 G3V4G9 280 aa15.41■□□□□ 0.06
HDAC4-215ENST00000543185 Q9H8V8 135 aa15.41■□□□□ 0.06
HDAC4-215ENST00000543185 IGLL5B9A064 214 aa15.41■□□□□ 0.06
HDAC4-215ENST00000543185 IGLC1P0CG04 106 aa15.41■□□□□ 0.06
HDAC4-215ENST00000543185 COL4A5P29400 1685 aa15.41■□□□□ 0.06
HDAC4-215ENST00000543185 ZNF726P1Q15940 193 aa15.41■□□□□ 0.06
HDAC4-215ENST00000543185 VSIG2Q96IQ7 327 aa15.4■□□□□ 0.06
HDAC4-215ENST00000543185 PRR31Q5SQ13 230 aa15.4■□□□□ 0.06
HDAC4-215ENST00000543185 TMEM256-PLSCR3K7ERE1 68 aa15.4■□□□□ 0.06
HDAC4-215ENST00000543185 FOXI1Q12951 378 aa15.4■□□□□ 0.06
HDAC4-215ENST00000543185 UBE2E2Q96LR5 201 aa15.4■□□□□ 0.06
HDAC4-215ENST00000543185 C11orf44Q8N8P7 122 aa15.4■□□□□ 0.06
HDAC4-215ENST00000543185 CSRP1P21291 193 aaKnown RBP15.4■□□□□ 0.06
HDAC4-215ENST00000543185 C22orf46C9J442 243 aa15.39■□□□□ 0.05
HDAC4-215ENST00000543185 CLPSP04118 112 aa15.39■□□□□ 0.05
HDAC4-215ENST00000543185 MUSTN1Q8IVN3 82 aa15.39■□□□□ 0.05
HDAC4-215ENST00000543185 GPR179Q6PRD1 2367 aa15.39■□□□□ 0.05
HDAC4-215ENST00000543185 IGKV1-6A0A0C4DH72 117 aa15.39■□□□□ 0.05
HDAC4-215ENST00000543185 ATP6V0E1O15342 81 aa15.39■□□□□ 0.05
HDAC4-215ENST00000543185 ATP5EP2Q5VTU8 51 aa15.39■□□□□ 0.05
HDAC4-215ENST00000543185 DEFB131AP59861 70 aa15.38■□□□□ 0.05
HDAC4-215ENST00000543185 DYNAPQ8N1N2 210 aa15.38■□□□□ 0.05
HDAC4-215ENST00000543185 ZNRF2Q8NHG8 242 aa15.38■□□□□ 0.05
HDAC4-215ENST00000543185 ADAMTS20P59510 1910 aa15.37■□□□□ 0.05
HDAC4-215ENST00000543185 CXCL5P42830 114 aa15.37■□□□□ 0.05
HDAC4-215ENST00000543185 PCP2Q8IVA1 136 aa15.37■□□□□ 0.05
HDAC4-215ENST00000543185 LINC00527Q9UJ94 153 aa15.37■□□□□ 0.05
HDAC4-215ENST00000543185 LYNX1G3V0Z9 82 aa15.37■□□□□ 0.05
HDAC4-215ENST00000543185 LYNX1P0DP58 116 aa15.37■□□□□ 0.05
HDAC4-215ENST00000543185 K7EN84 100 aa15.36■□□□□ 0.05
HDAC4-215ENST00000543185 ANGP03950 147 aaKnown RBP15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms