RNA–Protein interactions for RNA: ENST00000543170.5

COPS7A-216, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 2

Gene COPS7A, Length 552 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-216ENST00000543170 SPINK4O60575 86 aa13□□□□□ -0.33
COPS7A-216ENST00000543170 IFNA1P01562 189 aa13□□□□□ -0.33
COPS7A-216ENST00000543170 S100A9P06702 114 aaKnown RBP13□□□□□ -0.33
COPS7A-216ENST00000543170 ZNF80P51504 273 aaPredicted RBP13□□□□□ -0.33
COPS7A-216ENST00000543170 LGALS9BQ3B8N2 356 aa13□□□□□ -0.33
COPS7A-216ENST00000543170 ALKAL2Q6UX46 152 aa13□□□□□ -0.33
COPS7A-216ENST00000543170 SCO2A0A1W2PP80 73 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 LTAP01374 205 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 TMEM183AQ8IXX5 376 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 C11orf52Q96A22 123 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 NDUFAF3Q9BU61 184 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 SDF2L1Q9HCN8 221 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 NAGKQ9UJ70 344 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 HYDINQ4G0P3 5121 aa12.99□□□□□ -0.33
COPS7A-216ENST00000543170 GAGE12BA1L429 117 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 GAGE7O76087 117 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 GAGE12FP0CL80 117 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 GAGE12GP0CL81 117 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 GAGE12IP0CL82 117 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 HTN3P15516 51 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 TAGLN2P37802 199 aaKnown RBP12.98□□□□□ -0.33
COPS7A-216ENST00000543170 BLOC1S1P78537 153 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 Q6ZTI0 123 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 BOLA1Q9Y3E2 137 aa12.98□□□□□ -0.33
COPS7A-216ENST00000543170 TYMSP04818 313 aa12.97□□□□□ -0.33
COPS7A-216ENST00000543170 LGALS9CQ6DKI2 356 aa12.97□□□□□ -0.33
COPS7A-216ENST00000543170 SPXQ9BT56 116 aa12.97□□□□□ -0.33
COPS7A-216ENST00000543170 MDFICQ9P1T7 246 aa12.97□□□□□ -0.33
COPS7A-216ENST00000543170 VPS13DQ5THJ4 4388 aa12.96□□□□□ -0.33
COPS7A-216ENST00000543170 TRGV1A0A0A0MS02 117 aa12.96□□□□□ -0.33
COPS7A-216ENST00000543170 IGHV3-16A0A0C4DH30 117 aa12.96□□□□□ -0.33
COPS7A-216ENST00000543170 FABP5P3A8MUU1 101 aa12.96□□□□□ -0.33
COPS7A-216ENST00000543170 BCL2P10415 239 aa12.96□□□□□ -0.33
COPS7A-216ENST00000543170 MEF2BQ02080 365 aaPredicted RBP12.96□□□□□ -0.33
COPS7A-216ENST00000543170 LYPD6BQ8NI32 183 aa12.96□□□□□ -0.33
COPS7A-216ENST00000543170 C11orf21Q9P2W6 132 aa12.96□□□□□ -0.33
COPS7A-216ENST00000543170 PDE6DO43924 150 aa12.95□□□□□ -0.34
COPS7A-216ENST00000543170 ZC2HC1AQ96GY0 325 aa12.95□□□□□ -0.34
COPS7A-216ENST00000543170 TRGV2A0A075B6R0 118 aa12.94□□□□□ -0.34
COPS7A-216ENST00000543170 F5H768 121 aa12.94□□□□□ -0.34
COPS7A-216ENST00000543170 GNRH2O43555 120 aa12.94□□□□□ -0.34
COPS7A-216ENST00000543170 TMEM88Q6PEY1 159 aa12.94□□□□□ -0.34
COPS7A-216ENST00000543170 C15orf53Q8NAA6 179 aa12.94□□□□□ -0.34
COPS7A-216ENST00000543170 VAX2Q9UIW0 290 aa12.94□□□□□ -0.34
COPS7A-216ENST00000543170 MUC4Q99102 2169 aa12.94□□□□□ -0.34
COPS7A-216ENST00000543170 LY6G6CO95867 125 aa12.93□□□□□ -0.34
COPS7A-216ENST00000543170 ZNF674Q2M3X9 581 aa12.93□□□□□ -0.34
COPS7A-216ENST00000543170 FAM162BQ5T6X4 162 aa12.93□□□□□ -0.34
COPS7A-216ENST00000543170 RASL10AQ92737 203 aa12.93□□□□□ -0.34
COPS7A-216ENST00000543170 MLST8Q9BVC4 326 aa12.93□□□□□ -0.34
COPS7A-216ENST00000543170 MRPL16Q9NX20 251 aaKnown RBP12.93□□□□□ -0.34
COPS7A-216ENST00000543170 M0R2P5 195 aa12.92□□□□□ -0.34
COPS7A-216ENST00000543170 RPL35P42766 123 aaKnown RBP12.92□□□□□ -0.34
COPS7A-216ENST00000543170 DNAH6Q9C0G6 4158 aa12.91□□□□□ -0.34
COPS7A-216ENST00000543170 IGKV3D-20A0A0C4DH25 116 aa12.91□□□□□ -0.34
COPS7A-216ENST00000543170 SH2D1AO60880 128 aa12.91□□□□□ -0.34
COPS7A-216ENST00000543170 CRIP1P50238 77 aa12.91□□□□□ -0.34
COPS7A-216ENST00000543170 BAGE2Q86Y30 109 aa12.91□□□□□ -0.34
COPS7A-216ENST00000543170 C9orf85Q96MD7 179 aa12.91□□□□□ -0.34
COPS7A-216ENST00000543170 H3BNG1 76 aa12.9□□□□□ -0.34
COPS7A-216ENST00000543170 P0DMU3 169 aa12.9□□□□□ -0.34
COPS7A-216ENST00000543170 FAM231AP0DMU4 169 aa12.9□□□□□ -0.34
COPS7A-216ENST00000543170 FAM231CP0DMU5 169 aa12.9□□□□□ -0.34
COPS7A-216ENST00000543170 HOXA5P20719 270 aa12.9□□□□□ -0.34
COPS7A-216ENST00000543170 LINC01559Q495D7 138 aa12.9□□□□□ -0.34
COPS7A-216ENST00000543170 SMIM12Q96EX1 92 aa12.9□□□□□ -0.34
COPS7A-216ENST00000543170 B4DEV8 164 aa12.89□□□□□ -0.35
COPS7A-216ENST00000543170 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
COPS7A-216ENST00000543170 DNLZQ5SXM8 178 aa12.89□□□□□ -0.35
COPS7A-216ENST00000543170 PTH2Q96A98 100 aa12.89□□□□□ -0.35
COPS7A-216ENST00000543170 DERL1Q9BUN8 251 aa12.89□□□□□ -0.35
COPS7A-216ENST00000543170 KMT2AQ03164 3969 aa12.88□□□□□ -0.35
COPS7A-216ENST00000543170 ORM1P02763 201 aa12.88□□□□□ -0.35
COPS7A-216ENST00000543170 ASIPP42127 132 aa12.88□□□□□ -0.35
COPS7A-216ENST00000543170 NHLRC2Q8NBF2 726 aa12.88□□□□□ -0.35
COPS7A-216ENST00000543170 TRAV4A0A0B4J268 109 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 KRBOX1C9JBD0 128 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 NDUFS6O75380 124 aaKnown RBP12.87□□□□□ -0.35
COPS7A-216ENST00000543170 OR5I1Q13606 314 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 CENPWQ5EE01 88 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 ZNF506Q5JVG8 444 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 TEX261Q6UWH6 196 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 MED9Q9NWA0 146 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 IL36BQ9NZH7 164 aa12.87□□□□□ -0.35
COPS7A-216ENST00000543170 TRAV26-1A0A087WT03 109 aa12.86□□□□□ -0.35
COPS7A-216ENST00000543170 RBFOX3A6NFN3 312 aa12.86□□□□□ -0.35
COPS7A-216ENST00000543170 TMEM250H0YL14 139 aa12.86□□□□□ -0.35
COPS7A-216ENST00000543170 CXCL1P09341 107 aa12.86□□□□□ -0.35
COPS7A-216ENST00000543170 S100A4P26447 101 aaKnown RBP12.86□□□□□ -0.35
COPS7A-216ENST00000543170 SLAQ13239 276 aa12.86□□□□□ -0.35
COPS7A-216ENST00000543170 PIK3CD-AS1Q5SR53 167 aa12.86□□□□□ -0.35
COPS7A-216ENST00000543170 M0R036 132 aa12.85□□□□□ -0.35
COPS7A-216ENST00000543170 GNG4P50150 75 aa12.85□□□□□ -0.35
COPS7A-216ENST00000543170 CIDEAO60543 219 aa12.84□□□□□ -0.35
COPS7A-216ENST00000543170 IGLV2-8P01709 118 aa12.84□□□□□ -0.35
COPS7A-216ENST00000543170 ZNF876PQ49A33 203 aa12.84□□□□□ -0.35
COPS7A-216ENST00000543170 POM121L12Q8N7R1 296 aa12.84□□□□□ -0.35
COPS7A-216ENST00000543170 PRO0255Q9UI72 69 aa12.84□□□□□ -0.35
COPS7A-216ENST00000543170 NACAE9PAV3 2078 aa12.84□□□□□ -0.35
COPS7A-216ENST00000543170 TRBV20OR9-2A0A075B6H5 130 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 112.2 ms