RNA–Protein interactions for RNA: ENST00000542717.1

CHD4-209, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 3

Gene CHD4, Length 204 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-209ENST00000542717 C14orf166Q9Y224 244 aaKnown RBP1.87□□□□□ -2.11
CHD4-209ENST00000542717 RNF24Q9Y225 148 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 HIGD1AQ9Y241 93 aa1.87□□□□□ -2.11
CHD4-209ENST00000542717 KMT2DO14686 5537 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 MUC12Q9UKN1 5478 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 IGLV8-61A0A075B6I0 122 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 A0A0B4J2A0 478 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 LOC100506127A0A0U1RQW1 187 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 SMIM31A0A1B0GVY4 71 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 PRSS46E5RG02 174 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 CIDEAO60543 219 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 ZNF253O75346 499 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 APOA1P02647 267 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 CD3DP04234 171 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 IL5P05113 134 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 LINC00869P0C866 280 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 MGST1P10620 155 aaKnown RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 IAPPP10997 89 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 AKR1C4P17516 323 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 INPP1P49441 399 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 FGF8P55075 233 aaPredicted RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 GABARAPL2P60520 117 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 RAB2AP61019 212 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 SELENOTP62341 195 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 RPP30P78346 268 aaKnown RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 SRPXP78539 464 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 AKR1C1Q04828 323 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 GAGE2BQ13066 116 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 ERCC8Q13216 396 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 SCGB2B2Q4G0G5 96 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 HIGD2BQ4VC39 106 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 MPV17L2Q567V2 206 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 CFAP161Q6P656 301 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 CYP2G1PQ6ZSU1 146 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 PHF5AQ7RTV0 110 aaKnown RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 SNX29P2Q8IUI4 249 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 LINC00304Q8N9R0 145 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 OR2T35Q8NGX2 323 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 OR2G3Q8NGZ4 309 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 MRPL53Q96EL3 112 aaKnown RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 KCNS1Q96KK3 526 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 ATP5SQ99766 215 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 RTBDNQ9BSG5 229 aaPredicted RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 SSBP4Q9BWG4 385 aaPredicted RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 ARL6Q9H0F7 186 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 RPP21Q9H633 154 aaKnown RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 SHPKQ9UHJ6 478 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 PAIP2BQ9ULR5 123 aaKnown RBP1.86□□□□□ -2.11
CHD4-209ENST00000542717 PXMP4Q9Y6I8 212 aa1.86□□□□□ -2.11
CHD4-209ENST00000542717 PIGBOS1A0A0B4J2F0 54 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 SLC17A3O00476 420 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 LCE2BO14633 110 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 MED6O75586 246 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 RAB3DO95716 219 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 NMBP08949 121 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 IGLC2P0DOY2 106 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 CRISP2P16562 243 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 RPS19P39019 145 aaKnown RBP1.85□□□□□ -2.11
CHD4-209ENST00000542717 TAS2R19P59542 299 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 SURF2Q15527 256 aaPredicted RBP1.85□□□□□ -2.11
CHD4-209ENST00000542717 KRTAP13-3Q3SY46 172 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 TMEM78Q5T7P6 136 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 PXDC1Q5TGL8 231 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 CFAP126Q5VTH2 177 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 PATE2Q6UY27 113 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 LINC00305Q7Z4B0 112 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 LYZL2Q7Z4W2 148 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 BPIFA4PQ86YQ2 179 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 LINC00269Q8N2A0 174 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 TMEM229BQ8NBD8 167 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 OR51S1Q8NGJ8 323 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 TSKUQ8WUA8 353 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 YIPF6Q96EC8 236 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 FAM19A4Q96LR4 140 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 CNBD2Q96M20 576 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 CIB3Q96Q77 187 aaPredicted RBP1.85□□□□□ -2.11
CHD4-209ENST00000542717 KIR2DL4Q99706 377 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 CHCHD5Q9BSY4 110 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 ARV1Q9H2C2 271 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 MIXL1Q9H2W2 232 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 PRR13Q9NZ81 148 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 COMMD3Q9UBI1 195 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 MTFP1Q9UDX5 166 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 GPR132Q9UNW8 380 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 KCNIP3Q9Y2W7 256 aa1.85□□□□□ -2.11
CHD4-209ENST00000542717 A0A087X002 238 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 A0A1W2PNN7 141 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 DUXBA0A1W2PPF3 345 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 SMCO3A2RU48 225 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 DISC1C4P0D8 188 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 H3BP45 60 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 H3BQ15 152 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 K7EPK0 472 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 M0R3E3 92 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 WRBO00258 174 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 HPGDSO60760 199 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 GZMBP10144 247 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 TGFBR1P36897 503 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 PKIAP61925 76 aa1.84□□□□□ -2.11
CHD4-209ENST00000542717 KRTAP19-6Q3LI70 58 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms