RNA–Protein interactions for RNA: ENST00000542680.1

CACNA1C-IT3-201, CACNA1C intronic transcript 3, humanhuman

TSL 3 BASIC

Gene CACNA1C-IT3, Length 622 nt, Biotype sense intronic.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1C-IT3-201ENST00000542680 RPS20P60866 119 aaKnown RBP9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 SPINK13Q1W4C9 94 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 LINC01559Q495D7 138 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 KIR2DL5AQ8N109 375 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 DEFB125Q8N687 156 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 NUDT10Q8NFP7 164 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 KIR2DL5BQ8NHK3 375 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 NUDT11Q96G61 164 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 IMMP2LQ96T52 175 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 RPP21Q9H633 154 aaKnown RBP9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 SRD5A3Q9H8P0 318 aa9.02□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 FAM231BA6NCW3 169 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 GATCO43716 136 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 INSP01308 110 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 ZNF80P51504 273 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 KRTAP10-11P60412 298 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 PRR9Q5T870 116 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 GFI1BQ5VTD9 330 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 LINC00322Q6ZN03 302 aaPredicted RBP9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TMEM256Q8N2U0 113 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 GFRA4Q9GZZ7 299 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 RNASE7Q9H1E1 156 aaKnown RBP9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 WFDC10AQ9H1F0 79 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 RPS10P5Q9NQ39 176 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 V9GYV3 84 aa9.01□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 LOC102724200A0A096LPH7 203 aaPredicted RBP9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 ZNF705GA8MUZ8 300 aaPredicted RBP9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 M0R2Z0 102 aa9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 CRXO43186 299 aaPredicted RBP9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 RNASE4P34096 147 aaKnown RBP9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 APOC4P55056 127 aa9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 BTN1A1Q13410 526 aa9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TDRG1Q3Y452 100 aa9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 KCNS1Q96KK3 526 aa9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 LINC00467Q9BRT7 94 aa9□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TMEM189A5PLL7 270 aa8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 A8MWL6 223 aa8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 ZNF324O75467 553 aaPredicted RBP8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 OR2D3Q8NGH3 330 aa8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TSKUQ8WUA8 353 aa8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 PYGO2Q9BRQ0 406 aa8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TUBA4BQ9H853 241 aa8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 IL36BQ9NZH7 164 aa8.99□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TRAV9-1A0A075B6T8 112 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 UBE2CO00762 179 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 DNLZQ5SXM8 178 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 KCNIP4Q6PIL6 250 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 ATRAIDQ6UW56 229 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 FAM159AQ6UWV7 190 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 BTF3L4Q96K17 158 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 CSTL1Q9H114 145 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 SMCO4Q9NRQ5 59 aa8.98□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TRAV12-2A0A075B6T6 113 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 TRAV12-3A0A0B4J271 114 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 IGKV3D-20A0A0C4DH25 116 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 A0A1W2PPQ1 181 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 SMIM27A0A1W2PRY6 76 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 J3KRW8 73 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 ORM1P02763 201 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 IGHV4-30-4P0DP06 118 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 MED14OSP0DP75 135 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 S100PP25815 95 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 FOXA3P55318 350 aaPredicted RBP8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 KIR3DS1Q14943 382 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 GOLT1BQ9Y3E0 138 aa8.97□□□□□ -0.97
CACNA1C-IT3-201ENST00000542680 IGHV1OR15-1A0A075B7D0 117 aa8.96□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 CA1P00915 261 aaPredicted RBP8.96□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 GIG44P09565 113 aaPredicted RBP8.96□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RPL35AP18077 110 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RPL19P84098 196 aaKnown RBP8.96□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 XCL2Q9UBD3 114 aa8.96□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 NAT8BQ9UHF3 227 aa8.96□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ALMS1Q8TCU4 4167 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TRGV11A0A075B6L2 103 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 FXYD7P58549 80 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ANXA2RQ3ZCQ2 193 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 CSNK1G2-AS1Q8NCQ2 148 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 NEU1Q99519 415 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 C11orf21Q9P2W6 132 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TP53TG3Q9ULZ0 132 aa8.95□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 F2Z2F3 143 aa8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 IGLC6P0CF74 106 aa8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RBMY1A1P0DJD3 496 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RBMY1CP0DJD4 496 aa8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 CTRLP40313 264 aa8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ASIPP42127 132 aa8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 RBMY1FQ15415 496 aaKnown RBP8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ZNF705AQ6ZN79 300 aaPredicted RBP8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 C1orf158Q8N1D5 194 aa8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 NAGKQ9UJ70 344 aa8.94□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 HERC1Q15751 4861 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TRBV24-1A0A075B6N3 115 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 HIGD1CA8MV81 97 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 SNAI2O43623 268 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 TYMSP04818 313 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 OR5AL1P0C617 328 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 WDR73Q6P4I2 378 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 Q6ZWC4 215 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 ATP5L2Q7Z4Y8 100 aa8.93□□□□□ -0.98
CACNA1C-IT3-201ENST00000542680 FER1L6-AS1Q8NA97 138 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms