RNA–Protein interactions for RNA: ENST00000542661.1

DDX11-221, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 562 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-221ENST00000542661 TP53TG3Q9ULZ0 132 aa10.05□□□□□ -0.8
DDX11-221ENST00000542661 RYR3Q15413 4870 aa10.05□□□□□ -0.8
DDX11-221ENST00000542661 LGALS9BQ3B8N2 356 aa10.04□□□□□ -0.8
DDX11-221ENST00000542661 COX8CQ7Z4L0 72 aa10.04□□□□□ -0.8
DDX11-221ENST00000542661 TMEM183AQ8IXX5 376 aa10.04□□□□□ -0.8
DDX11-221ENST00000542661 SPXQ9BT56 116 aa10.04□□□□□ -0.8
DDX11-221ENST00000542661 NDUFAF3Q9BU61 184 aa10.04□□□□□ -0.8
DDX11-221ENST00000542661 TRGV1A0A0A0MS02 117 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 GAGE12BA1L429 117 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 FABP5P3A8MUU1 101 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 SPINK4O60575 86 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 GAGE7O76087 117 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 LTAP01374 205 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 GAGE12FP0CL80 117 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 GAGE12GP0CL81 117 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 GAGE12IP0CL82 117 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 ZNF80P51504 273 aaPredicted RBP10.03□□□□□ -0.8
DDX11-221ENST00000542661 Q6ZTI0 123 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 SACSQ9NZJ4 4579 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 APLNQ9ULZ1 77 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 BOLA1Q9Y3E2 137 aa10.03□□□□□ -0.8
DDX11-221ENST00000542661 TRGV2A0A075B6R0 118 aa10.02□□□□□ -0.81
DDX11-221ENST00000542661 SCO2A0A1W2PP80 73 aa10.02□□□□□ -0.81
DDX11-221ENST00000542661 F5H768 121 aa10.02□□□□□ -0.81
DDX11-221ENST00000542661 PDE6DO43924 150 aa10.02□□□□□ -0.81
DDX11-221ENST00000542661 MEF2BQ02080 365 aaPredicted RBP10.02□□□□□ -0.81
DDX11-221ENST00000542661 LINC00476Q8WZB0 136 aa10.02□□□□□ -0.81
DDX11-221ENST00000542661 C18orf15Q96N68 181 aa10.02□□□□□ -0.81
DDX11-221ENST00000542661 MDFICQ9P1T7 246 aa10.02□□□□□ -0.81
DDX11-221ENST00000542661 IGHV3-16A0A0C4DH30 117 aa10.01□□□□□ -0.81
DDX11-221ENST00000542661 GNRH2O43555 120 aa10.01□□□□□ -0.81
DDX11-221ENST00000542661 BCL2P10415 239 aa10.01□□□□□ -0.81
DDX11-221ENST00000542661 FAM162BQ5T6X4 162 aa10.01□□□□□ -0.81
DDX11-221ENST00000542661 LGALS9CQ6DKI2 356 aa10.01□□□□□ -0.81
DDX11-221ENST00000542661 C11orf52Q96A22 123 aa10.01□□□□□ -0.81
DDX11-221ENST00000542661 VAX2Q9UIW0 290 aa10.01□□□□□ -0.81
DDX11-221ENST00000542661 LY6G6CO95867 125 aa10□□□□□ -0.81
DDX11-221ENST00000542661 TYMSP04818 313 aa10□□□□□ -0.81
DDX11-221ENST00000542661 TMEM88Q6PEY1 159 aa10□□□□□ -0.81
DDX11-221ENST00000542661 C15orf53Q8NAA6 179 aa10□□□□□ -0.81
DDX11-221ENST00000542661 ZC2HC1AQ96GY0 325 aa10□□□□□ -0.81
DDX11-221ENST00000542661 C11orf21Q9P2W6 132 aa10□□□□□ -0.81
DDX11-221ENST00000542661 RPL35P42766 123 aaKnown RBP9.99□□□□□ -0.81
DDX11-221ENST00000542661 BAGE2Q86Y30 109 aa9.99□□□□□ -0.81
DDX11-221ENST00000542661 LYPD6BQ8NI32 183 aa9.99□□□□□ -0.81
DDX11-221ENST00000542661 RASL10AQ92737 203 aa9.99□□□□□ -0.81
DDX11-221ENST00000542661 MRPL16Q9NX20 251 aaKnown RBP9.99□□□□□ -0.81
DDX11-221ENST00000542661 M0R2P5 195 aa9.98□□□□□ -0.81
DDX11-221ENST00000542661 SH2D1AO60880 128 aa9.98□□□□□ -0.81
DDX11-221ENST00000542661 ORM1P02763 201 aa9.98□□□□□ -0.81
DDX11-221ENST00000542661 OR5I1Q13606 314 aa9.98□□□□□ -0.81
DDX11-221ENST00000542661 ZNF674Q2M3X9 581 aa9.98□□□□□ -0.81
DDX11-221ENST00000542661 MUC4Q99102 2169 aa9.98□□□□□ -0.81
DDX11-221ENST00000542661 VPS13DQ5THJ4 4388 aa9.97□□□□□ -0.81
DDX11-221ENST00000542661 B4DEV8 164 aa9.97□□□□□ -0.81
DDX11-221ENST00000542661 P0DMU3 169 aa9.97□□□□□ -0.81
DDX11-221ENST00000542661 FAM231AP0DMU4 169 aa9.97□□□□□ -0.81
DDX11-221ENST00000542661 FAM231CP0DMU5 169 aa9.97□□□□□ -0.81
DDX11-221ENST00000542661 CRIP1P50238 77 aa9.97□□□□□ -0.81
DDX11-221ENST00000542661 MLST8Q9BVC4 326 aa9.97□□□□□ -0.81
DDX11-221ENST00000542661 RYR2Q92736 4967 aa9.96□□□□□ -0.81
DDX11-221ENST00000542661 IGKV3D-20A0A0C4DH25 116 aa9.96□□□□□ -0.82
DDX11-221ENST00000542661 S100A4P26447 101 aaKnown RBP9.96□□□□□ -0.82
DDX11-221ENST00000542661 ASIPP42127 132 aa9.96□□□□□ -0.82
DDX11-221ENST00000542661 SLAQ13239 276 aa9.96□□□□□ -0.82
DDX11-221ENST00000542661 TEX261Q6UWH6 196 aa9.96□□□□□ -0.82
DDX11-221ENST00000542661 NHLRC2Q8NBF2 726 aa9.96□□□□□ -0.82
DDX11-221ENST00000542661 SMIM12Q96EX1 92 aa9.96□□□□□ -0.82
DDX11-221ENST00000542661 MED9Q9NWA0 146 aa9.96□□□□□ -0.82
DDX11-221ENST00000542661 RBFOX3A6NFN3 312 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 KRBOX1C9JBD0 128 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 H3BNG1 76 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 HOXA5P20719 270 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 GNG4P50150 75 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 ZNF876PQ49A33 203 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 PTH2Q96A98 100 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 C9orf85Q96MD7 179 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 DERL1Q9BUN8 251 aa9.95□□□□□ -0.82
DDX11-221ENST00000542661 TRAV26-1A0A087WT03 109 aa9.94□□□□□ -0.82
DDX11-221ENST00000542661 RNASE3P12724 160 aaKnown RBP9.94□□□□□ -0.82
DDX11-221ENST00000542661 LINC01559Q495D7 138 aa9.94□□□□□ -0.82
DDX11-221ENST00000542661 CENPWQ5EE01 88 aa9.94□□□□□ -0.82
DDX11-221ENST00000542661 DNLZQ5SXM8 178 aa9.94□□□□□ -0.82
DDX11-221ENST00000542661 IL36BQ9NZH7 164 aa9.94□□□□□ -0.82
DDX11-221ENST00000542661 TRAV4A0A0B4J268 109 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 TMEM250H0YL14 139 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 M0R036 132 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 NDUFS6O75380 124 aaKnown RBP9.93□□□□□ -0.82
DDX11-221ENST00000542661 NUDT3O95989 172 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 IGHV3-53P01767 116 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 RNF212Q495C1 297 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 ZNF506Q5JVG8 444 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 PIK3CD-AS1Q5SR53 167 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 OR4C5Q8NGB2 326 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 BIN3Q9NQY0 253 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 PRO0255Q9UI72 69 aa9.93□□□□□ -0.82
DDX11-221ENST00000542661 TRGV4A0A0C4DH28 118 aa9.92□□□□□ -0.82
DDX11-221ENST00000542661 RAB19A4D1S5 217 aa9.92□□□□□ -0.82
DDX11-221ENST00000542661 C9JCJ5 164 aa9.92□□□□□ -0.82
DDX11-221ENST00000542661 CIDEAO60543 219 aa9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 59.6 ms