RNA–Protein interactions for RNA: ENST00000542552.1

ECHDC2-223, Transcript of enoyl-CoA hydratase domain containing 2, human

TSL 1 (best)

Gene ECHDC2, Length 981 nt, Biotype nonsense mediated decay.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ECHDC2-223	ENST00000542552	PKD1	P98161	4303 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	IGHV3-16	A0A0C4DH30	117 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	IFNA7	P01567	189 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	EIF5A	P63241	154 aa	Known RBP	10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	SAPCD1	Q5SSQ6	148 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552		Q6ZR54	194 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	PRNT	Q86SH4	94 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	STOML3	Q8TAV4	291 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	RASL10A	Q92737	203 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	HIST1H2BA	Q96A08	127 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	VSIG2	Q96IQ7	327 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	KCNS1	Q96KK3	526 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	C11orf21	Q9P2W6	132 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	NAGK	Q9UJ70	344 aa		10.75	□□□□□ -0.69
ECHDC2-223	ENST00000542552	TRAV34	A0A0B4J273	112 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552		A0A0J9YY99	117 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	PEX7	O00628	323 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	GCG	P01275	180 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	TYMS	P04818	313 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	LGALSL	Q3ZCW2	172 aa	Predicted RBP	10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	SMUG1	Q53HV7	270 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	DPPA3	Q6W0C5	159 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	FAM213B	Q8TBF2	198 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	ARL2-SNX15	V9GYD0	113 aa		10.74	□□□□□ -0.69
ECHDC2-223	ENST00000542552	PFDN1	O60925	122 aa		10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	PFN1	P07737	140 aa	Known RBP	10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	TPT1	P13693	172 aa	Known RBP	10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	ZNRF2	Q8NHG8	242 aa		10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	SFT2D1	Q8WV19	159 aa		10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	TCEAL7	Q9BRU2	100 aa		10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	SDF2L1	Q9HCN8	221 aa		10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	LINC00588	Q9Y4M8	146 aa		10.73	□□□□□ -0.69
ECHDC2-223	ENST00000542552	C1QB	P02746	253 aa		10.72	□□□□□ -0.69
ECHDC2-223	ENST00000542552	PPT1	P50897	306 aa		10.72	□□□□□ -0.69
ECHDC2-223	ENST00000542552	CCL18	P55774	89 aa		10.72	□□□□□ -0.69
ECHDC2-223	ENST00000542552	FHL2	Q14192	279 aa		10.72	□□□□□ -0.69
ECHDC2-223	ENST00000542552	ZFP69	Q49AA0	526 aa		10.72	□□□□□ -0.69
ECHDC2-223	ENST00000542552	COX8C	Q7Z4L0	72 aa		10.72	□□□□□ -0.69
ECHDC2-223	ENST00000542552		Q86TA4	180 aa		10.72	□□□□□ -0.69
ECHDC2-223	ENST00000542552	IGLV2-18	A0A075B6J9	118 aa		10.71	□□□□□ -0.69
ECHDC2-223	ENST00000542552		M0R2N4	97 aa		10.71	□□□□□ -0.69
ECHDC2-223	ENST00000542552		M0R2P5	195 aa		10.71	□□□□□ -0.69
ECHDC2-223	ENST00000542552	IGHV3-53	P01767	116 aa		10.71	□□□□□ -0.69
ECHDC2-223	ENST00000542552	PKHD1	P08F94	4074 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552		A0A096LPF7	62 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	TRBV6-1	A0A0K0K1D8	114 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	PAGE4	O60829	102 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	CRYBA4	P53673	196 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	SLA	Q13239	276 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ESRG	Q1W209	222 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	CST9LP1	Q5W188	147 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	FMC1	Q96HJ9	113 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	PRO0255	Q9UI72	69 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	HHLA3	Q9XRX5	114 aa		10.7	□□□□□ -0.7
ECHDC2-223	ENST00000542552	RTL8C	O15255	209 aa		10.69	□□□□□ -0.7
ECHDC2-223	ENST00000542552	PAX4	O43316	350 aa		10.69	□□□□□ -0.7
ECHDC2-223	ENST00000542552	H2AFB1	P0C5Y9	115 aa		10.69	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ZNF479	Q96JC4	524 aa		10.69	□□□□□ -0.7
ECHDC2-223	ENST00000542552	C9orf85	Q96MD7	179 aa		10.69	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ZFP30	Q9Y2G7	519 aa		10.69	□□□□□ -0.7
ECHDC2-223	ENST00000542552	TRAV1-1	A0A0B4J248	108 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	TRAV4	A0A0B4J268	109 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	IGKV3D-20	A0A0C4DH25	116 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	FABP5P3	A8MUU1	101 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	SFTA3	P0C7M3	94 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	CRIP1	P50238	77 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	RAB5C	P51148	216 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	LINC00336	Q6ZUF6	198 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	PTH2	Q96A98	100 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	UPK3B	Q9BT76	320 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552	DNAH11	Q96DT5	4516 aa		10.68	□□□□□ -0.7
ECHDC2-223	ENST00000542552		A0A1B0GV50	99 aa		10.67	□□□□□ -0.7
ECHDC2-223	ENST00000542552	LTA	P01374	205 aa		10.67	□□□□□ -0.7
ECHDC2-223	ENST00000542552	EIF5AL1	Q6IS14	154 aa	Known RBP	10.67	□□□□□ -0.7
ECHDC2-223	ENST00000542552	AKAP14	Q86UN6	197 aa		10.67	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ZC2HC1A	Q96GY0	325 aa		10.67	□□□□□ -0.7
ECHDC2-223	ENST00000542552	TRGV4	A0A0C4DH28	118 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	NBDY	A0A0U1RRE5	68 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	RNASE3	P12724	160 aa	Known RBP	10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	CCL20	P78556	96 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ZNF876P	Q49A33	203 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	SLC51B	Q86UW2	128 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ZNF575	Q86XF7	245 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	OR4C5	Q8NGB2	326 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	MRPS16	Q9Y3D3	137 aa	Known RBP	10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ICOS	Q9Y6W8	199 aa		10.66	□□□□□ -0.7
ECHDC2-223	ENST00000542552	hCG_2014768	A0A024R1R8	64 aa		10.65	□□□□□ -0.7
ECHDC2-223	ENST00000542552	SULT1A2	P50226	295 aa		10.65	□□□□□ -0.7
ECHDC2-223	ENST00000542552	UBE2G1	P62253	170 aa		10.65	□□□□□ -0.7
ECHDC2-223	ENST00000542552	ZNF674	Q2M3X9	581 aa		10.65	□□□□□ -0.7
ECHDC2-223	ENST00000542552		Q9H8V8	135 aa		10.65	□□□□□ -0.7
ECHDC2-223	ENST00000542552	DYNC1H1	Q14204	4646 aa	Known RBP	10.65	□□□□□ -0.71
ECHDC2-223	ENST00000542552	SCO2	A0A1W2PP80	73 aa		10.64	□□□□□ -0.71
ECHDC2-223	ENST00000542552	KRBOX1	C9JBD0	128 aa		10.64	□□□□□ -0.71
ECHDC2-223	ENST00000542552	RS1	O15537	224 aa		10.64	□□□□□ -0.71
ECHDC2-223	ENST00000542552	S100A9	P06702	114 aa	Known RBP	10.64	□□□□□ -0.71
ECHDC2-223	ENST00000542552	AKR1C3	P42330	323 aa		10.64	□□□□□ -0.71
ECHDC2-223	ENST00000542552	MRPL23	Q16540	153 aa	Known RBP	10.64	□□□□□ -0.71
ECHDC2-223	ENST00000542552	DNLZ	Q5SXM8	178 aa		10.64	□□□□□ -0.71
ECHDC2-223	ENST00000542552	FAM162B	Q5T6X4	162 aa		10.64	□□□□□ -0.71

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