RNA–Protein interactions for RNA: ENST00000541713.5

PTPN1-202, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

TSL 2 BASIC

Gene PTPN1, Length 3,469 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-202ENST00000541713 F5H697 171 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 PRB1P04280 392 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 ZC2HC1BQ5TFG8 222 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 C12orf54Q6X4T0 127 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 JPT2Q9H910 190 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 TRAV8-2A0A0B4J237 113 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 MINOS1Q5TGZ0 78 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 RPL39LQ96EH5 51 aaKnown RBP10.38□□□□□ -0.75
PTPN1-202ENST00000541713 MINOS1-NBL1R4GNA1 71 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 FN1P02751 2386 aaKnown RBP10.38□□□□□ -0.75
PTPN1-202ENST00000541713 C2orf91Q6ZV80 131 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 ITLN2Q8WWU7 325 aaPredicted RBP10.38□□□□□ -0.75
PTPN1-202ENST00000541713 RNF185Q96GF1 192 aa10.38□□□□□ -0.75
PTPN1-202ENST00000541713 IGHV4-30-2A0A087WSY4 118 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 ORAOV1Q8WV07 137 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 SRSF8Q9BRL6 282 aaKnown RBP10.37□□□□□ -0.75
PTPN1-202ENST00000541713 COX8AP10176 69 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 UCNP55089 124 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 AJUBAQ96IF1 538 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 TRAV12-2A0A075B6T6 113 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 A0A087WWL8 130 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 CRXO43186 299 aaPredicted RBP10.37□□□□□ -0.75
PTPN1-202ENST00000541713 Q6AWC8 147 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 C5orf56Q8N8D9 126 aa10.37□□□□□ -0.75
PTPN1-202ENST00000541713 GAGE1Q13065 139 aa10.36□□□□□ -0.75
PTPN1-202ENST00000541713 CCL19Q99731 98 aa10.36□□□□□ -0.75
PTPN1-202ENST00000541713 TMEM8BA6NDV4 472 aa10.36□□□□□ -0.75
PTPN1-202ENST00000541713 SMIM17P0DL12 118 aa10.36□□□□□ -0.75
PTPN1-202ENST00000541713 ZNF575Q86XF7 245 aa10.36□□□□□ -0.75
PTPN1-202ENST00000541713 PHLDA3Q9Y5J5 127 aa10.36□□□□□ -0.75
PTPN1-202ENST00000541713 GAGE10A6NGK3 116 aa10.35□□□□□ -0.75
PTPN1-202ENST00000541713 C16orf54Q6UWD8 224 aa10.35□□□□□ -0.75
PTPN1-202ENST00000541713 MRPL35Q9NZE8 188 aaKnown RBP10.35□□□□□ -0.75
PTPN1-202ENST00000541713 OR4X2Q8NGF9 303 aa10.35□□□□□ -0.75
PTPN1-202ENST00000541713 AVPP01185 164 aa10.35□□□□□ -0.75
PTPN1-202ENST00000541713 ZNF688P0C7X2 276 aa10.35□□□□□ -0.75
PTPN1-202ENST00000541713 IGLC6P0CF74 106 aa10.35□□□□□ -0.75
PTPN1-202ENST00000541713 PPP1R14DQ9NXH3 145 aa10.35□□□□□ -0.75
PTPN1-202ENST00000541713 SAP30O75446 220 aa10.34□□□□□ -0.75
PTPN1-202ENST00000541713 KHDC1LQ5JSQ8 128 aa10.34□□□□□ -0.75
PTPN1-202ENST00000541713 HIVEP2P31629 2446 aa10.34□□□□□ -0.75
PTPN1-202ENST00000541713 PRM2P04554 102 aa10.34□□□□□ -0.75
PTPN1-202ENST00000541713 ANXA2RQ3ZCQ2 193 aa10.34□□□□□ -0.75
PTPN1-202ENST00000541713 NHP2Q9NX24 153 aaKnown RBP10.34□□□□□ -0.75
PTPN1-202ENST00000541713 TRAV12-3A0A0B4J271 114 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 RIPPLY3P57055 190 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 PAX2Q02962 417 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 OR10J6PQ8NGY7 276 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 RHPN1-AS1Q9BWJ2 59 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 ZNF493Q6ZR52 646 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 DEFB125Q8N687 156 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 C11orf44Q8N8P7 122 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 MYOZ3Q8TDC0 251 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 DUX3Q96PT4 197 aa10.33□□□□□ -0.76
PTPN1-202ENST00000541713 MOB4Q9Y3A3 225 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 IGHV1-69DA0A0B4J2H0 117 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 A0A1B0GW15 77 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 IGHV1-69P01742 117 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 RPS20P60866 119 aaKnown RBP10.32□□□□□ -0.76
PTPN1-202ENST00000541713 CLEC2AQ6UVW9 174 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 IGHV3-73A0A0B4J1V6 119 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 GAGE12BA1L429 117 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 SCGB2A2Q13296 93 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 JMJD8Q96S16 334 aa10.32□□□□□ -0.76
PTPN1-202ENST00000541713 RPL24P83731 157 aaKnown RBP10.31□□□□□ -0.76
PTPN1-202ENST00000541713 MS4A6AQ9H2W1 248 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 FXYD2P54710 66 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 EBI3Q14213 229 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 SPOCK3Q9BQ16 436 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 SLC50A1Q9BRV3 221 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 CD5LO43866 347 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 IGHV4-59P01825 116 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 PIFOQ8TCI5 191 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 KLK9Q9UKQ9 250 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 ZNF256Q9Y2P7 627 aaPredicted RBP10.31□□□□□ -0.76
PTPN1-202ENST00000541713 CBY1Q9Y3M2 126 aa10.31□□□□□ -0.76
PTPN1-202ENST00000541713 USP24Q9UPU5 2620 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 C1orf122Q6ZSJ8 110 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 MRPL52Q86TS9 123 aaKnown RBP10.3□□□□□ -0.76
PTPN1-202ENST00000541713 NPFFR1Q9GZQ6 430 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 OOSP1A8MZH6 123 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 IGKCP01834 107 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 PIMREGQ9BSJ6 248 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 IGHV3-64A0A075B6Q5 118 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 TGFAP01135 160 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 MAPKAPK5-AS1Q8N8E1 139 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 CST9LQ9H4G1 147 aa10.3□□□□□ -0.76
PTPN1-202ENST00000541713 TRBV7-1A0A0A6YYK4 115 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 CD7P09564 240 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 DEFB136Q30KP8 78 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 PSMG4Q5JS54 123 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 SCGB3A1Q96QR1 104 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 A0A0G2JLM5 398 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 FGF6P10767 208 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 ODF1Q14990 250 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 LGALS9BQ3B8N2 356 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 LGALS9CQ6DKI2 356 aa10.29□□□□□ -0.76
PTPN1-202ENST00000541713 FLNAP21333 2647 aaKnown RBP10.28□□□□□ -0.76
PTPN1-202ENST00000541713 IGHV7-4-1A0A0J9YVY3 117 aa10.28□□□□□ -0.76
PTPN1-202ENST00000541713 TRBV6-1A0A0K0K1D8 114 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 84.2 ms