RNA–Protein interactions for RNA: ENST00000541694.5

LINC01089-208, Transcript of long intergenic non-protein coding RNA 1089, human

TSL 2

Gene LINC01089, Length 875 nt, Biotype lincRNA.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
LINC01089-208	ENST00000541694	MIF	P14174	115 aa		10.84	□□□□□ -0.67
LINC01089-208	ENST00000541694	ADCYAP1	P18509	176 aa		10.84	□□□□□ -0.67
LINC01089-208	ENST00000541694	RPL23	P62829	140 aa	Known RBP	10.84	□□□□□ -0.67
LINC01089-208	ENST00000541694	TP53TG3	Q9ULZ0	132 aa		10.84	□□□□□ -0.67
LINC01089-208	ENST00000541694	TRGV11	A0A075B6L2	103 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	IGKV3D-20	A0A0C4DH25	116 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	C19orf71	A6NCJ1	209 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694		B4DEV8	164 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694		P01737	135 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	AZU1	P20160	251 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	TDRG1	Q3Y452	100 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	C16orf74	Q96GX8	76 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	SEC11C	Q9BY50	192 aa		10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	RNASE7	Q9H1E1	156 aa	Known RBP	10.83	□□□□□ -0.68
LINC01089-208	ENST00000541694	TG	P01266	2768 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	TMSB15B	A0A087X1C1	80 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	IGHV4-28	A0A0C4DH34	117 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	TMEM189	A5PLL7	270 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	KRBOX1	C9JBD0	128 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	DEFB4A	O15263	64 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	GNRH2	O43555	120 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	TYMS	P04818	313 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	ERVFC1-1	P60608	527 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	RPL19	P84098	196 aa	Known RBP	10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	LINC01559	Q495D7	138 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	IBA57	Q5T440	356 aa	Known RBP	10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694		Q8NAQ8	132 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	NUDT10	Q8NFP7	164 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	TMEM263	Q8WUH6	116 aa	Known RBP	10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	ISOC2	Q96AB3	205 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	NUDT11	Q96G61	164 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	NBEAL2	Q6ZNJ1	2754 aa		10.82	□□□□□ -0.68
LINC01089-208	ENST00000541694	EMP1	P54849	157 aa		10.81	□□□□□ -0.68
LINC01089-208	ENST00000541694	ZNF415	Q09FC8	603 aa		10.81	□□□□□ -0.68
LINC01089-208	ENST00000541694	PNRC1	Q12796	327 aa	Predicted RBP	10.81	□□□□□ -0.68
LINC01089-208	ENST00000541694	ZNF493	Q6ZR52	646 aa		10.81	□□□□□ -0.68
LINC01089-208	ENST00000541694	OR2D3	Q8NGH3	330 aa		10.81	□□□□□ -0.68
LINC01089-208	ENST00000541694	RNASE8	Q8TDE3	154 aa	Known RBP	10.81	□□□□□ -0.68
LINC01089-208	ENST00000541694	GRIFIN	A4D1Z8	144 aa		10.8	□□□□□ -0.68
LINC01089-208	ENST00000541694	SNURFL	B1AK76	121 aa		10.8	□□□□□ -0.68
LINC01089-208	ENST00000541694	GATC	O43716	136 aa	Known RBP	10.8	□□□□□ -0.68
LINC01089-208	ENST00000541694	ASIP	P42127	132 aa		10.8	□□□□□ -0.68
LINC01089-208	ENST00000541694	FAM231D	Q6ZW35	169 aa		10.8	□□□□□ -0.68
LINC01089-208	ENST00000541694	C15orf54	Q8N8G6	183 aa		10.8	□□□□□ -0.68
LINC01089-208	ENST00000541694	RPP21	Q9H633	154 aa	Known RBP	10.8	□□□□□ -0.68
LINC01089-208	ENST00000541694	IGHV3-16	A0A0C4DH30	117 aa		10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694	S100A4	P26447	101 aa	Known RBP	10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694	RPS20	P60866	119 aa	Known RBP	10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694	C11orf72	Q8NBR9	251 aa		10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694	SFRP2	Q96HF1	295 aa		10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694	GSN-AS1	Q9NRJ2	163 aa		10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694	OSTC	Q9NRP0	149 aa		10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694	MDFIC	Q9P1T7	246 aa		10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694		U3KQK5	164 aa		10.79	□□□□□ -0.68
LINC01089-208	ENST00000541694		A0A0J9YWU9	116 aa		10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	PLAC8L1	A1L4L8	177 aa		10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	XKRY2	A2RUG3	117 aa		10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	TCL1A	P56279	114 aa		10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	C10orf91	Q5T1B1	145 aa		10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	OR10G8	Q8NGN5	311 aa		10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	C11orf68	Q9H3H3	251 aa	Known RBP	10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	CARHSP1	Q9Y2V2	147 aa	Known RBP	10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	TIMM8B	Q9Y5J9	83 aa	Predicted RBP	10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694	COL7A1	Q02388	2944 aa		10.78	□□□□□ -0.68
LINC01089-208	ENST00000541694		H3BVH4	76 aa		10.77	□□□□□ -0.69
LINC01089-208	ENST00000541694	CXCL1	P09341	107 aa		10.77	□□□□□ -0.69
LINC01089-208	ENST00000541694	GZMB	P10144	247 aa		10.77	□□□□□ -0.69
LINC01089-208	ENST00000541694	NOP10	Q9NPE3	64 aa	Known RBP	10.77	□□□□□ -0.69
LINC01089-208	ENST00000541694	DNAH9	Q9NYC9	4486 aa		10.76	□□□□□ -0.69
LINC01089-208	ENST00000541694	RNASE3	P12724	160 aa	Known RBP	10.76	□□□□□ -0.69
LINC01089-208	ENST00000541694	DNLZ	Q5SXM8	178 aa		10.76	□□□□□ -0.69
LINC01089-208	ENST00000541694		A8MWL6	223 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	APOC3	P02656	99 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	MT-ND4L	P03901	98 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	ARMS2	P0C7Q2	107 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	CT83	Q5H943	113 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	FAM222A	Q5U5X8	452 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	ZNF575	Q86XF7	245 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	IL17D	Q8TAD2	202 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	C9orf85	Q96MD7	179 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	SPX	Q9BT56	116 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	IL36B	Q9NZH7	164 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694		V9GYV3	84 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	MUC4	Q99102	2169 aa		10.75	□□□□□ -0.69
LINC01089-208	ENST00000541694	PPP1R2P9	O14990	202 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	SPART-AS1	P0CW21	52 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	MED14OS	P0DP75	135 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	DAZ2	Q13117	558 aa	Known RBP	10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	RNF212	Q495C1	297 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	FER1L6-AS1	Q8NA97	138 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	TPPP3	Q9BW30	176 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	DKK2	Q9UBU2	259 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	CELA1	Q9UNI1	258 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	TENM3	Q9P273	2699 aa		10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	HUWE1	Q7Z6Z7	4374 aa	Known RBP	10.74	□□□□□ -0.69
LINC01089-208	ENST00000541694	TRGV1	A0A0A0MS02	117 aa		10.73	□□□□□ -0.69
LINC01089-208	ENST00000541694	TEX48	A0A1B0GUV7	120 aa		10.73	□□□□□ -0.69
LINC01089-208	ENST00000541694	CXorf65	A6NEN9	183 aa		10.73	□□□□□ -0.69
LINC01089-208	ENST00000541694	LYRM9	A8MSI8	78 aa		10.73	□□□□□ -0.69
LINC01089-208	ENST00000541694		M0R2P5	195 aa		10.73	□□□□□ -0.69

Retrieved 100 of 20,778 RNA–protein pairs in 59.9 ms