RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 ZNF345Q14585 488 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 RHOHQ15669 191 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 UBE2NLQ5JXB2 153 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 C9orf163Q8N9P6 203 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 KIF25-AS1Q9Y6Z4 181 aa6.02□□□□□ -1.45
YBX3-211ENST00000541351 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.02□□□□□ -1.45
YBX3-211ENST00000541351 LPAP08519 4548 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 A0A087WWC5 75 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 PMS2P5A8MQ11 134 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 KLLNB2CW77 178 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 CIDEAO60543 219 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 NDUFB6O95139 128 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 CDS2O95674 445 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 OR5G3P0C626 314 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 RNASE4P34096 147 aaKnown RBP6.01□□□□□ -1.45
YBX3-211ENST00000541351 AKR1C1Q04828 323 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 MEF2DQ14814 521 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 DNLZQ5SXM8 178 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 DPPA3Q6W0C5 159 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 BPIFA4PQ86YQ2 179 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 OR52I2Q8NH67 350 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 SLC25A38Q96DW6 304 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 LINC00477Q96M19 166 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 TMEM222Q9H0R3 208 aa6.01□□□□□ -1.45
YBX3-211ENST00000541351 KANTRA0A1W2PQU2 76 aa6□□□□□ -1.45
YBX3-211ENST00000541351 ANKRD20A5PA0PJZ0 165 aa6□□□□□ -1.45
YBX3-211ENST00000541351 C5orf52A6NGY3 159 aa6□□□□□ -1.45
YBX3-211ENST00000541351 C1orf196B1AJZ1 125 aa6□□□□□ -1.45
YBX3-211ENST00000541351 PHOX2AO14813 284 aa6□□□□□ -1.45
YBX3-211ENST00000541351 ARPC5O15511 151 aa6□□□□□ -1.45
YBX3-211ENST00000541351 AKR1C4P17516 323 aa6□□□□□ -1.45
YBX3-211ENST00000541351 RAB4BP61018 213 aa6□□□□□ -1.45
YBX3-211ENST00000541351 SELENOTP62341 195 aa6□□□□□ -1.45
YBX3-211ENST00000541351 SMCO1Q147U7 214 aa6□□□□□ -1.45
YBX3-211ENST00000541351 SP6Q3SY56 376 aa6□□□□□ -1.45
YBX3-211ENST00000541351 ACOT7LQ6ZUV0 252 aa6□□□□□ -1.45
YBX3-211ENST00000541351 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
YBX3-211ENST00000541351 KCNRGQ8N5I3 272 aa6□□□□□ -1.45
YBX3-211ENST00000541351 C15orf54Q8N8G6 183 aa6□□□□□ -1.45
YBX3-211ENST00000541351 THAP6Q8TBB0 222 aa6□□□□□ -1.45
YBX3-211ENST00000541351 C1orf43Q9BWL3 253 aa6□□□□□ -1.45
YBX3-211ENST00000541351 SEC11CQ9BY50 192 aa6□□□□□ -1.45
YBX3-211ENST00000541351 NIT2Q9NQR4 276 aa6□□□□□ -1.45
YBX3-211ENST00000541351 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
YBX3-211ENST00000541351 SLC39A9Q9NUM3 307 aa6□□□□□ -1.45
YBX3-211ENST00000541351 FXYD6-FXYD2A0A087WZ82 144 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 PIGBOS1A0A0B4J2F0 54 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 LOC100131303A0A0U1RQF7 123 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 BCL2L11O43521 198 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 SIX6O95475 246 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 OR4E1P0C645 316 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 GATA1P15976 413 aaPredicted RBP5.99□□□□□ -1.45
YBX3-211ENST00000541351 SSBP1Q04837 148 aaKnown RBP5.99□□□□□ -1.45
YBX3-211ENST00000541351 CIRBPQ14011 172 aaKnown RBP5.99□□□□□ -1.45
YBX3-211ENST00000541351 PEA15Q15121 130 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 LBHQ53QV2 105 aaPredicted RBP5.99□□□□□ -1.45
YBX3-211ENST00000541351 ZNF664Q8N3J9 261 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 SMCO4Q9NRQ5 59 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 HSPB7Q9UBY9 170 aa5.99□□□□□ -1.45
YBX3-211ENST00000541351 TRGV11A0A075B6L2 103 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 TRBV6-4A0A1B0GX49 114 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 PGPA6NDG6 321 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 FBLL1A6NHQ2 334 aaKnown RBP5.98□□□□□ -1.45
YBX3-211ENST00000541351 CCSO14618 274 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 PI3P19957 117 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 PLP1P60201 277 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 PRR3P79522 188 aaKnown RBP5.98□□□□□ -1.45
YBX3-211ENST00000541351 MARCH1Q8TCQ1 289 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 GTSF1Q8WW33 167 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 UBE2WQ96B02 151 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 LINC00479Q96M42 142 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 CHCHD7Q9BUK0 85 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 PSORS1C2Q9UIG4 136 aa5.98□□□□□ -1.45
YBX3-211ENST00000541351 A0A087WYN8 130 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 TEX13DA0A0J9YY54 714 aaPredicted RBP5.97□□□□□ -1.45
YBX3-211ENST00000541351 PRAC2D3DTV9 90 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 H7C1H1 209 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 LINC00869P0C866 280 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 RAB5CP51148 216 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 BLOC1S1P78537 153 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 PRR4Q16378 134 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 TMEM268Q5VZI3 342 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 SDIM1Q6ZPB5 146 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 Q8TAT8 98 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 STOML3Q8TAV4 291 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 GPX8Q8TED1 209 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 MRPL53Q96EL3 112 aaKnown RBP5.97□□□□□ -1.45
YBX3-211ENST00000541351 ATP5SQ99766 215 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 RBKSQ9H477 322 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 TP53TG3Q9ULZ0 132 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 FLVCR2Q9UPI3 526 aa5.97□□□□□ -1.45
YBX3-211ENST00000541351 C14orf166Q9Y224 244 aaKnown RBP5.97□□□□□ -1.45
YBX3-211ENST00000541351 A0A087WX48 190 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 TRAV16A0A0A6YYK6 109 aaPredicted RBP5.96□□□□□ -1.46
YBX3-211ENST00000541351 M0R2P5 195 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 GOSR2O14653 212 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 CRPP02741 224 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 MT-ND4LP03901 98 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 CRISP2P16562 243 aa5.96□□□□□ -1.46
YBX3-211ENST00000541351 RAB2AP61019 212 aa5.96□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms