RNA–Protein interactions for RNA: ENST00000541171.1

LEMD3-203, Transcript of LEM domain containing 3, humanhuman

TSL 2

Gene LEMD3, Length 856 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LEMD3-203ENST00000541171 CRYGDP07320 174 aa16.21■□□□□ 0.19
LEMD3-203ENST00000541171 LENEPQ9Y5L5 61 aa16.21■□□□□ 0.19
LEMD3-203ENST00000541171 TRAV4A0A0B4J268 109 aa16.2■□□□□ 0.18
LEMD3-203ENST00000541171 C9JCJ5 164 aa16.2■□□□□ 0.18
LEMD3-203ENST00000541171 K7EP13 123 aa16.2■□□□□ 0.18
LEMD3-203ENST00000541171 KHDC3LQ587J8 217 aa16.2■□□□□ 0.18
LEMD3-203ENST00000541171 AQP10Q96PS8 301 aa16.2■□□□□ 0.18
LEMD3-203ENST00000541171 PGPA6NDG6 321 aa16.19■□□□□ 0.18
LEMD3-203ENST00000541171 SMR3BP02814 79 aaPredicted RBP16.19■□□□□ 0.18
LEMD3-203ENST00000541171 GCSHP23434 173 aa16.19■□□□□ 0.18
LEMD3-203ENST00000541171 TAS2R45P59539 299 aa16.19■□□□□ 0.18
LEMD3-203ENST00000541171 SMIM3Q9BZL3 60 aa16.19■□□□□ 0.18
LEMD3-203ENST00000541171 IGHV3-16A0A0C4DH30 117 aa16.18■□□□□ 0.18
LEMD3-203ENST00000541171 M0R2P5 195 aa16.18■□□□□ 0.18
LEMD3-203ENST00000541171 NHLRC2Q8NBF2 726 aa16.18■□□□□ 0.18
LEMD3-203ENST00000541171 CMTM2Q8TAZ6 248 aa16.18■□□□□ 0.18
LEMD3-203ENST00000541171 SCGB1C1Q8TD33 95 aa16.18■□□□□ 0.18
LEMD3-203ENST00000541171 C10orf126Q8N4M7 172 aa16.17■□□□□ 0.18
LEMD3-203ENST00000541171 OTORQ9NRC9 128 aa16.17■□□□□ 0.18
LEMD3-203ENST00000541171 F6UZH7 168 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 PSCAO43653 123 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 PPT1P50897 306 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 HAMPP81172 84 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 TDRG1Q3Y452 100 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 GOLT1AQ6ZVE7 132 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 OR2T35Q8NGX2 323 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 TMED6Q8WW62 240 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 WFDC1Q9HC57 220 aa16.16■□□□□ 0.18
LEMD3-203ENST00000541171 DMBT1Q9UGM3 2413 aaPredicted RBP16.16■□□□□ 0.18
LEMD3-203ENST00000541171 FAM74A1Q5RGS3 127 aa16.15■□□□□ 0.18
LEMD3-203ENST00000541171 TRAV21A0A0B4J279 112 aa16.14■□□□□ 0.17
LEMD3-203ENST00000541171 TYMSP04818 313 aa16.14■□□□□ 0.17
LEMD3-203ENST00000541171 Q5BKY6 102 aa16.14■□□□□ 0.17
LEMD3-203ENST00000541171 TRAV8-1A0A0A6YYK1 113 aa16.13■□□□□ 0.17
LEMD3-203ENST00000541171 IGHV3-38A0A0C4DH36 116 aa16.13■□□□□ 0.17
LEMD3-203ENST00000541171 SH2D6Q7Z4S9 175 aa16.13■□□□□ 0.17
LEMD3-203ENST00000541171 INO80EQ8NBZ0 244 aaPredicted RBP16.13■□□□□ 0.17
LEMD3-203ENST00000541171 TVP23CQ96ET8 276 aa16.13■□□□□ 0.17
LEMD3-203ENST00000541171 SDF2L1Q9HCN8 221 aa16.13■□□□□ 0.17
LEMD3-203ENST00000541171 TREM1Q9NP99 234 aa16.13■□□□□ 0.17
LEMD3-203ENST00000541171 VPS13BQ7Z7G8 4022 aa16.12■□□□□ 0.17
LEMD3-203ENST00000541171 IGLV5-52A0A0A0MRZ9 124 aa16.12■□□□□ 0.17
LEMD3-203ENST00000541171 GATA1P15976 413 aaPredicted RBP16.12■□□□□ 0.17
LEMD3-203ENST00000541171 GNG5P63218 68 aa16.12■□□□□ 0.17
LEMD3-203ENST00000541171 TNFSF18Q9UNG2 199 aa16.12■□□□□ 0.17
LEMD3-203ENST00000541171 FXYD6-FXYD2A0A087WZ82 144 aa16.11■□□□□ 0.17
LEMD3-203ENST00000541171 A0A1W2PPV4 95 aa16.11■□□□□ 0.17
LEMD3-203ENST00000541171 RNF222A6NCQ9 220 aa16.11■□□□□ 0.17
LEMD3-203ENST00000541171 G3V3Q6 166 aa16.11■□□□□ 0.17
LEMD3-203ENST00000541171 SGK494Q96LW2 274 aa16.11■□□□□ 0.17
LEMD3-203ENST00000541171 HMGB3O15347 200 aaKnown RBP16.1■□□□□ 0.17
LEMD3-203ENST00000541171 ACOT6Q3I5F7 207 aaPredicted RBP16.1■□□□□ 0.17
LEMD3-203ENST00000541171 KCNS1Q96KK3 526 aa16.1■□□□□ 0.17
LEMD3-203ENST00000541171 Q9HAA7 133 aa16.1■□□□□ 0.17
LEMD3-203ENST00000541171 TRAV8-6A0A0B4J262 113 aa16.09■□□□□ 0.17
LEMD3-203ENST00000541171 LRCOL1A6NCL2 159 aa16.09■□□□□ 0.17
LEMD3-203ENST00000541171 FBLL1A6NHQ2 334 aaKnown RBP16.09■□□□□ 0.17
LEMD3-203ENST00000541171 FAM229AH3BQW9 127 aa16.09■□□□□ 0.17
LEMD3-203ENST00000541171 TIRAPP58753 221 aa16.09■□□□□ 0.17
LEMD3-203ENST00000541171 OR10J3Q5JRS4 329 aa16.09■□□□□ 0.17
LEMD3-203ENST00000541171 PQLC2Q6ZP29 291 aa16.09■□□□□ 0.17
LEMD3-203ENST00000541171 PSMG3Q9BT73 122 aaPredicted RBP16.09■□□□□ 0.17
LEMD3-203ENST00000541171 IGHV3-73A0A0B4J1V6 119 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 IGHV3-30P01768 117 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 IGHV3-33P01772 117 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 PFN1P07737 140 aaKnown RBP16.08■□□□□ 0.16
LEMD3-203ENST00000541171 IGHV3-30-3P0DP02 117 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 IGHV3-30-5P0DP03 117 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 RAB2AP61019 212 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 LINC01556Q5JQF7 62 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 SLC25A29Q8N8R3 303 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 OR2G3Q8NGZ4 309 aa16.08■□□□□ 0.16
LEMD3-203ENST00000541171 FLG2Q5D862 2391 aaPredicted RBP16.07■□□□□ 0.16
LEMD3-203ENST00000541171 IBA57-AS1B1ANH7 110 aa16.07■□□□□ 0.16
LEMD3-203ENST00000541171 ZNF876PQ49A33 203 aa16.07■□□□□ 0.16
LEMD3-203ENST00000541171 PRADC1Q9BSG0 188 aa16.07■□□□□ 0.16
LEMD3-203ENST00000541171 NTN5Q8WTR8 489 aaPredicted RBP16.06■□□□□ 0.16
LEMD3-203ENST00000541171 CFAP126Q5VTH2 177 aa16.05■□□□□ 0.16
LEMD3-203ENST00000541171 DPPA3Q6W0C5 159 aa16.05■□□□□ 0.16
LEMD3-203ENST00000541171 ARL6IP6Q8N6S5 226 aa16.05■□□□□ 0.16
LEMD3-203ENST00000541171 HSD17B11Q8NBQ5 300 aa16.05■□□□□ 0.16
LEMD3-203ENST00000541171 OR10G9Q8NGN4 311 aa16.05■□□□□ 0.16
LEMD3-203ENST00000541171 OR10G7Q8NGN6 311 aa16.05■□□□□ 0.16
LEMD3-203ENST00000541171 NDFIP1Q9BT67 221 aa16.05■□□□□ 0.16
LEMD3-203ENST00000541171 MYCBP2O75592 4640 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 BORCS7-ASMTA0A0B4J1R7 106 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 RS1O15537 224 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 ATP6V0CP27449 155 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 ZNF80P51504 273 aaPredicted RBP16.04■□□□□ 0.16
LEMD3-203ENST00000541171 SERF2P84101 59 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 RHOHQ15669 191 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 Q8N814 137 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 TMEM70Q9BUB7 260 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 C11orf21Q9P2W6 132 aa16.04■□□□□ 0.16
LEMD3-203ENST00000541171 SRRM2Q9UQ35 2752 aaKnown RBP16.04■□□□□ 0.16
LEMD3-203ENST00000541171 TRBV6-4A0A1B0GX49 114 aa16.02■□□□□ 0.16
LEMD3-203ENST00000541171 TAAR5O14804 337 aa16.02■□□□□ 0.16
LEMD3-203ENST00000541171 ARPC5O15511 151 aa16.02■□□□□ 0.16
LEMD3-203ENST00000541171 MBP02144 154 aa16.02■□□□□ 0.16
LEMD3-203ENST00000541171 ARL14EPLP0DKL9 152 aa16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 58 ms