RNA–Protein interactions for RNA: ENST00000540804.5

MSRB3-209, Transcript of methionine sulfoxide reductase B3, humanhuman

TSL 2 BASIC

Gene MSRB3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSRB3-209ENST00000540804 SCRT2Q9NQ03 307 aa9.83□□□□□ -0.84
MSRB3-209ENST00000540804 C11orf21Q9P2W6 132 aa9.83□□□□□ -0.84
MSRB3-209ENST00000540804 TRAV4A0A0B4J268 109 aa9.82□□□□□ -0.84
MSRB3-209ENST00000540804 TRAV21A0A0B4J279 112 aa9.82□□□□□ -0.84
MSRB3-209ENST00000540804 FAM74A1Q5RGS3 127 aa9.82□□□□□ -0.84
MSRB3-209ENST00000540804 Q8N1X5 172 aa9.82□□□□□ -0.84
MSRB3-209ENST00000540804 TMEM75Q8N9X5 138 aa9.82□□□□□ -0.84
MSRB3-209ENST00000540804 OR4C5Q8NGB2 326 aa9.82□□□□□ -0.84
MSRB3-209ENST00000540804 SH3BGRL3Q9H299 93 aa9.82□□□□□ -0.84
MSRB3-209ENST00000540804 C9JCJ5 164 aa9.81□□□□□ -0.84
MSRB3-209ENST00000540804 M0R2P5 195 aa9.81□□□□□ -0.84
MSRB3-209ENST00000540804 STAG3L2P0CL84 134 aa9.81□□□□□ -0.84
MSRB3-209ENST00000540804 STAG3L3P0CL85 134 aa9.81□□□□□ -0.84
MSRB3-209ENST00000540804 ATP6V0CP27449 155 aa9.81□□□□□ -0.84
MSRB3-209ENST00000540804 CDC34P49427 236 aaPredicted RBP9.81□□□□□ -0.84
MSRB3-209ENST00000540804 PCNPQ8WW12 178 aaKnown RBP9.81□□□□□ -0.84
MSRB3-209ENST00000540804 RAB24Q969Q5 203 aa9.81□□□□□ -0.84
MSRB3-209ENST00000540804 LY96Q9Y6Y9 160 aa9.81□□□□□ -0.84
MSRB3-209ENST00000540804 IGHV3-73A0A0B4J1V6 119 aa9.8□□□□□ -0.84
MSRB3-209ENST00000540804 GCHFRP30047 84 aa9.8□□□□□ -0.84
MSRB3-209ENST00000540804 DPPA3Q6W0C5 159 aa9.8□□□□□ -0.84
MSRB3-209ENST00000540804 SDF2L1Q9HCN8 221 aa9.8□□□□□ -0.84
MSRB3-209ENST00000540804 GGTLC3B5MD39 225 aa9.79□□□□□ -0.84
MSRB3-209ENST00000540804 TCRAP04437 139 aa9.79□□□□□ -0.84
MSRB3-209ENST00000540804 OR2G3Q8NGZ4 309 aa9.79□□□□□ -0.84
MSRB3-209ENST00000540804 ASB13Q8WXK3 278 aa9.79□□□□□ -0.84
MSRB3-209ENST00000540804 A0A087WTM6 91 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 IGLV2-11P01706 119 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 ORM1P02763 201 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 ERVFC1-1P60608 527 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 SUMO1P63165 101 aaKnown RBP9.78□□□□□ -0.84
MSRB3-209ENST00000540804 SUN5Q8TC36 379 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 LINC00479Q96M42 142 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 AQP10Q96PS8 301 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 MSRB1Q9NZV6 116 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 PSG8Q9UQ74 426 aa9.78□□□□□ -0.84
MSRB3-209ENST00000540804 FAT1Q14517 4588 aa9.77□□□□□ -0.84
MSRB3-209ENST00000540804 GCGP01275 180 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 GATA1P15976 413 aaPredicted RBP9.77□□□□□ -0.85
MSRB3-209ENST00000540804 ZNF876PQ49A33 203 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 LCE2DQ5TA82 110 aaPredicted RBP9.77□□□□□ -0.85
MSRB3-209ENST00000540804 PRNTQ86SH4 94 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 ARL6IP6Q8N6S5 226 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 SLC25A29Q8N8R3 303 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 C5orf17Q8NAS9 161 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 NHLRC2Q8NBF2 726 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 KCNS1Q96KK3 526 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 PSMG3Q9BT73 122 aaPredicted RBP9.77□□□□□ -0.85
MSRB3-209ENST00000540804 MED28Q9H204 178 aa9.77□□□□□ -0.85
MSRB3-209ENST00000540804 TRAV9-2A0A087WT02 112 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 TRAV34A0A0B4J273 112 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 PGPEP1LA6NFU8 196 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 CRYGDP07320 174 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 EVI2AP22794 236 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 KRTAP10-1P60331 282 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 ZNF726P1Q15940 193 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 CFAP126Q5VTH2 177 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 RPL7L1Q6DKI1 246 aaKnown RBP9.76□□□□□ -0.85
MSRB3-209ENST00000540804 TXNDC17Q9BRA2 123 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 NDFIP1Q9BT67 221 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 PGPEP1Q9NXJ5 209 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 EPDR1Q9UM22 224 aa9.76□□□□□ -0.85
MSRB3-209ENST00000540804 FBLL1A6NHQ2 334 aaKnown RBP9.75□□□□□ -0.85
MSRB3-209ENST00000540804 RS1O15537 224 aa9.75□□□□□ -0.85
MSRB3-209ENST00000540804 XGP55808 180 aa9.75□□□□□ -0.85
MSRB3-209ENST00000540804 FLI1Q01543 452 aaPredicted RBP9.75□□□□□ -0.85
MSRB3-209ENST00000540804 NFE4Q86UQ8 179 aa9.75□□□□□ -0.85
MSRB3-209ENST00000540804 C9orf85Q96MD7 179 aa9.75□□□□□ -0.85
MSRB3-209ENST00000540804 VPS13BQ7Z7G8 4022 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 RNF222A6NCQ9 220 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 TAAR5O14804 337 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 EREGO14944 169 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 PTTG1O95997 202 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 CXorf1O96002 111 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 RNASE3P12724 160 aaKnown RBP9.74□□□□□ -0.85
MSRB3-209ENST00000540804 PPT1P50897 306 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 ZNF506Q5JVG8 444 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 Q6ZSN1 163 aa9.74□□□□□ -0.85
MSRB3-209ENST00000540804 ACTR3CQ9C0K3 210 aaPredicted RBP9.74□□□□□ -0.85
MSRB3-209ENST00000540804 FXYD6-FXYD2A0A087WZ82 144 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 IGKV3D-20A0A0C4DH25 116 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 SERTM2A0A1B0GWG4 89 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 PFN1P07737 140 aaKnown RBP9.73□□□□□ -0.85
MSRB3-209ENST00000540804 FGF8P55075 233 aaPredicted RBP9.73□□□□□ -0.85
MSRB3-209ENST00000540804 UBE2G2P60604 165 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 HAMPP81172 84 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 SERF2P84101 59 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 SMUG1Q53HV7 270 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 CYB561D1Q8N8Q1 229 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 BATF3Q9NR55 127 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 TMEM167BQ9NRX6 74 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 TNFSF18Q9UNG2 199 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 DNAH8Q96JB1 4490 aa9.73□□□□□ -0.85
MSRB3-209ENST00000540804 IGHV3-38A0A0C4DH36 116 aa9.72□□□□□ -0.85
MSRB3-209ENST00000540804 K7EQM0 130 aa9.72□□□□□ -0.85
MSRB3-209ENST00000540804 IGHV3-30P01768 117 aa9.72□□□□□ -0.85
MSRB3-209ENST00000540804 IGHV3-33P01772 117 aa9.72□□□□□ -0.85
MSRB3-209ENST00000540804 MBP02144 154 aa9.72□□□□□ -0.85
MSRB3-209ENST00000540804 IGHV3-30-3P0DP02 117 aa9.72□□□□□ -0.85
MSRB3-209ENST00000540804 IGHV3-30-5P0DP03 117 aa9.72□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 579.7 ms