RNA–Protein interactions for RNA: ENST00000540709.1

MDM2-227, Transcript of MDM2 proto-oncogene, humanhuman

TSL 3

Gene MDM2, Length 502 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-227ENST00000540709 SARNPP82979 210 aaKnown RBP0.48□□□□□ -2.33
MDM2-227ENST00000540709 CCSMST1Q4G0I0 132 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 RPL7L1Q6DKI1 246 aaKnown RBP0.48□□□□□ -2.33
MDM2-227ENST00000540709 LYPD5Q6UWN5 251 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 Q6ZQY7 126 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 ATG5Q9H1Y0 275 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 TAS2R8Q9NYW2 309 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 ADGBQ8N7X0 1667 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 ZCCHC11Q5TAX3 1644 aaKnown RBP0.48□□□□□ -2.33
MDM2-227ENST00000540709 CHD3Q12873 2000 aaKnown RBP0.48□□□□□ -2.33
MDM2-227ENST00000540709 KIAA1549Q9HCM3 1950 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 CASP8AP2Q9UKL3 1982 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 FRMPD1Q5SYB0 1578 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 NISCHQ9Y2I1 1504 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 FER1L6Q2WGJ9 1857 aa0.48□□□□□ -2.33
MDM2-227ENST00000540709 TNRC6BQ9UPQ9 1833 aaKnown RBP0.48□□□□□ -2.33
MDM2-227ENST00000540709 COL24A1Q17RW2 1714 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 MYLKQ15746 1914 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 FAM236AA0A1B0GUQ0 79 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 FAM236BA0A1B0GV22 79 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 A6NIN4 97 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 HIGD1CA8MV81 97 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 FAM25AB3EWG3 89 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 FAM25CB3EWG5 89 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 FAM25GB3EWG6 89 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 FXYD1O00168 92 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 IGHV3-30P01768 117 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 CCKP06307 115 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 IGHV3-30-5P0DP03 117 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 PDE6GP18545 87 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 RPL37AP61513 92 aaKnown RBP0.47□□□□□ -2.33
MDM2-227ENST00000540709 RPS25P62851 125 aaKnown RBP0.47□□□□□ -2.33
MDM2-227ENST00000540709 ASB16-AS1Q495Z4 193 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 GLYATL3Q5SZD4 288 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 KCNRGQ8N5I3 272 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 ATP6V0E2Q8NHE4 81 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 DYNLRB2Q8TF09 96 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 SAR1AQ9NR31 198 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 LSM2Q9Y333 95 aaKnown RBP0.47□□□□□ -2.33
MDM2-227ENST00000540709 SYNJ1O43426 1573 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 FREM3P0C091 2139 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 DISP2A7MBM2 1401 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 POLEQ07864 2286 aa0.47□□□□□ -2.33
MDM2-227ENST00000540709 TNRC6AQ8NDV7 1962 aaKnown RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 TRPM1Q7Z4N2 1603 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 SIP14410 1827 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 XIRP1Q702N8 1843 aaKnown RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 NCOA6Q14686 2063 aaPredicted RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 TRBV20-1A0A075B6N2 111 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 LOC101927531A0A1B0GV80 90 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 J3QLW9 94 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 NPFFO15130 113 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 SNCGO76070 127 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 GUCA1AP43080 201 aaPredicted RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 CAV3P56539 151 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 RRAS2P62070 204 aaPredicted RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 ZNF56Q15929 161 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 MIC13Q5XKP0 118 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 ATP11AUNQ6ZP68 121 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 SBSPONQ8IVN8 264 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 ATOH7Q8N100 152 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 PPDPFLQ8WWR9 84 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 DMAC1Q96GE9 116 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 CCL19Q99731 98 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 MRPL35Q9NZE8 188 aaKnown RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 PAIP2BQ9ULR5 123 aaKnown RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 COL1A1P02452 1464 aaPredicted RBP0.46□□□□□ -2.34
MDM2-227ENST00000540709 OVOS2A0A0J9YW53 1432 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 OVOS2Q6IE36 1432 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 ERBINQ96RT1 1412 aa0.46□□□□□ -2.34
MDM2-227ENST00000540709 ADGRB2O60241 1585 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 UNC13CQ8NB66 2214 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 TRBV10-1A0A0K0K1A3 114 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 A0A1W2PPM0 123 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 TCRBV3S1A0A5B6 114 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 A6NN06 94 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 M0R2P5 195 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 GNG7O60262 68 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 SNRNP200O75643 2136 aaKnown RBP0.45□□□□□ -2.34
MDM2-227ENST00000540709 IGF2P01344 180 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 IL5P05113 134 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 PIRTP0C851 137 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 PYYP10082 97 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 SLC25A6P12236 298 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 SPINT3P49223 89 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 XAF1Q6GPH4 301 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 LINC00575Q6W349 94 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 Q6ZS92 163 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 Q8N6K4 173 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 PPP1R1CQ8WVI7 109 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 ARL11Q969Q4 196 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 TMEM141Q96I45 108 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 LINC00208Q96KT6 92 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 COA4Q9NYJ1 87 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 ERG28Q9UKR5 140 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 ARAP1Q96P48 1450 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 PLXNA4Q9HCM2 1894 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 ARHGAP31Q2M1Z3 1444 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 EML5Q05BV3 1969 aa0.45□□□□□ -2.34
MDM2-227ENST00000540709 IBTKQ9P2D0 1353 aaPredicted RBP0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 190.8 ms