RNA–Protein interactions for RNA: ENST00000540699.1

ATL3-204, Transcript of atlastin GTPase 3, humanhuman

TSL 3

Gene ATL3, Length 714 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATL3-204ENST00000540699 NEU1Q99519 415 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 TM2D3Q9BRN9 247 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 GFRA4Q9GZZ7 299 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 HLA-DRB4X5D2U9 266 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 RYR2Q92736 4967 aa7.77□□□□□ -1.17
ATL3-204ENST00000540699 DYNC2H1Q8NCM8 4307 aaKnown RBP7.76□□□□□ -1.17
ATL3-204ENST00000540699 LOC102724200A0A096LPH7 203 aaPredicted RBP7.76□□□□□ -1.17
ATL3-204ENST00000540699 KIR2DL5BA0A0G2JN68 375 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 KIR2DL5BA0A0G2JPC4 375 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 FABP5P3A8MUU1 101 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 A8MWL6 223 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 DUSP14O95147 198 aaKnown RBP7.76□□□□□ -1.17
ATL3-204ENST00000540699 FOXA3P55318 350 aaPredicted RBP7.76□□□□□ -1.17
ATL3-204ENST00000540699 TCL1AP56279 114 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 KIR3DS1Q14943 382 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 Q6AWC8 147 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 KIR2DL5AQ8N109 375 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 KIR2DL5BQ8NHK3 375 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 GTSF1Q8WW33 167 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 BTF3L4Q96K17 158 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 C11orf21Q9P2W6 132 aa7.76□□□□□ -1.17
ATL3-204ENST00000540699 IGKV3D-20A0A0C4DH25 116 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 KNCNA6PVL3 124 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 H3BMM0 161 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 LEPP41159 167 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 Q6ZQT7 251 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 TRPT1Q86TN4 253 aaKnown RBP7.75□□□□□ -1.17
ATL3-204ENST00000540699 NUP35Q8NFH5 326 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 CLUHP3Q96NS8 147 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 NAT8BQ9UHF3 227 aa7.75□□□□□ -1.17
ATL3-204ENST00000540699 TRAV21A0A0B4J279 112 aa7.74□□□□□ -1.17
ATL3-204ENST00000540699 TMEM189A5PLL7 270 aa7.74□□□□□ -1.17
ATL3-204ENST00000540699 HIGD1CA8MV81 97 aa7.74□□□□□ -1.17
ATL3-204ENST00000540699 UBE2CO00762 179 aa7.74□□□□□ -1.17
ATL3-204ENST00000540699 PHOX2AO14813 284 aa7.74□□□□□ -1.17
ATL3-204ENST00000540699 GZMBP10144 247 aa7.74□□□□□ -1.17
ATL3-204ENST00000540699 RPS20P60866 119 aaKnown RBP7.74□□□□□ -1.17
ATL3-204ENST00000540699 CSMD3Q7Z407 3707 aa7.74□□□□□ -1.17
ATL3-204ENST00000540699 A0A1B0GXF2 115 aa7.73□□□□□ -1.17
ATL3-204ENST00000540699 GPX1P07203 203 aa7.73□□□□□ -1.17
ATL3-204ENST00000540699 IGLC6P0CF74 106 aa7.73□□□□□ -1.17
ATL3-204ENST00000540699 RPS10P46783 165 aaKnown RBP7.73□□□□□ -1.17
ATL3-204ENST00000540699 APOC4P55056 127 aa7.73□□□□□ -1.17
ATL3-204ENST00000540699 ACTL10Q5JWF8 245 aa7.73□□□□□ -1.17
ATL3-204ENST00000540699 U3KQK5 164 aa7.73□□□□□ -1.17
ATL3-204ENST00000540699 STARD9Q9P2P6 4700 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 TMSB15BA0A087X1C1 80 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 XKRY2A2RUG3 117 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 C7orf71A4D174 169 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 J3KRW8 73 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 M0R2Z0 102 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 CRXO43186 299 aaPredicted RBP7.72□□□□□ -1.17
ATL3-204ENST00000540699 ZNF324O75467 553 aaPredicted RBP7.72□□□□□ -1.17
ATL3-204ENST00000540699 IGKV3-20P01619 116 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 ORM1P02763 201 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 RPL35AP18077 110 aaKnown RBP7.72□□□□□ -1.17
ATL3-204ENST00000540699 TSPOP30536 169 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 RNASE4P34096 147 aaKnown RBP7.72□□□□□ -1.17
ATL3-204ENST00000540699 CDKN1BP46527 198 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 GFI1BQ5VTD9 330 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 Q6ZWC4 215 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 ATP5L2Q7Z4Y8 100 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 STHQ8IWL8 128 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 SPATA25Q9BR10 227 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 CSTL1Q9H114 145 aa7.72□□□□□ -1.17
ATL3-204ENST00000540699 TMA7Q9Y2S6 64 aaKnown RBP7.72□□□□□ -1.17
ATL3-204ENST00000540699 GIG44P09565 113 aaPredicted RBP7.71□□□□□ -1.18
ATL3-204ENST00000540699 CTRLP40313 264 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 SPINK13Q1W4C9 94 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 COX19Q49B96 90 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 MRPL54Q6P161 138 aaKnown RBP7.71□□□□□ -1.18
ATL3-204ENST00000540699 MORN3Q6PF18 240 aaPredicted RBP7.71□□□□□ -1.18
ATL3-204ENST00000540699 RASL11AQ6T310 242 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 TMEM136Q6ZRR5 245 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 PGLYRP4Q96LB8 373 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 TP53TG1Q9Y2A0 90 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 SACSQ9NZJ4 4579 aa7.71□□□□□ -1.18
ATL3-204ENST00000540699 TRAV12-2A0A075B6T6 113 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 SPINK4O60575 86 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 TRGC2P03986 189 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 ANXA2RQ3ZCQ2 193 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 DNLZQ5SXM8 178 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 FER1L6-AS1Q8NA97 138 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 GATD1Q8NB37 220 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 GNB1LQ9BYB4 327 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 CNFNQ9BYD5 112 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 ZMAT4Q9H898 229 aa7.7□□□□□ -1.18
ATL3-204ENST00000540699 GRIFINA4D1Z8 144 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 C1orf196B1AJZ1 125 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 C3orf84H3BNL1 204 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 SNAI2O43623 268 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 ARMS2P0C7Q2 107 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 RBMY1A1P0DJD3 496 aaKnown RBP7.69□□□□□ -1.18
ATL3-204ENST00000540699 RBMY1CP0DJD4 496 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 HBBP68871 147 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 RBMY1FQ15415 496 aaKnown RBP7.69□□□□□ -1.18
ATL3-204ENST00000540699 TDRG1Q3Y452 100 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 WDR73Q6P4I2 378 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 LYZL1Q6UWQ5 148 aa7.69□□□□□ -1.18
ATL3-204ENST00000540699 RNF183Q96D59 192 aa7.69□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms