RNA–Protein interactions for RNA: ENST00000540236.3

PBX1-212, Transcript of PBX homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene PBX1, Length 6,175 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PBX1-212ENST00000540236 ZNF318Q5VUA4 2279 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 ATP5IP56385 69 aaPredicted RBP8.64□□□□□ -1.03
PBX1-212ENST00000540236 PRSS22Q9GZN4 317 aa8.64□□□□□ -1.03
PBX1-212ENST00000540236 V9GYY9 64 aa8.63□□□□□ -1.03
PBX1-212ENST00000540236 A0A096LNJ9 63 aa8.63□□□□□ -1.03
PBX1-212ENST00000540236 CEMP1Q6PRD7 247 aaPredicted RBP8.63□□□□□ -1.03
PBX1-212ENST00000540236 SZT2Q5T011 3432 aa8.63□□□□□ -1.03
PBX1-212ENST00000540236 C1orf53Q5VUE5 145 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 SMIM2Q9BVW6 85 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 SPANXA1Q9NS26 97 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 TRBV7-3A0A075B6L6 115 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 UQCRQO14949 82 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 TRAV23DV6A0A075B6W5 121 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 IGHV1-18A0A0C4DH31 117 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 LGALS9O00182 355 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 TM4SF5O14894 197 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 DEFB109BQ30KR1 87 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 GAFA1Q96PS6 74 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 GNRH2O43555 120 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 TRIAP1O43715 76 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 LYPD2Q6UXB3 125 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 DEFB1P60022 68 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 DPH3P1Q9H4G8 78 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 HHLA3Q9XRX5 114 aa8.62□□□□□ -1.03
PBX1-212ENST00000540236 RPL35AP18077 110 aaKnown RBP8.61□□□□□ -1.03
PBX1-212ENST00000540236 SPRR3Q9UBC9 169 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 KLK9Q9UKQ9 250 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 SHISA9B4DS77 424 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 PRAC2D3DTV9 90 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 C19orf54Q5BKX5 351 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 PAPPA-AS1Q5QFB9 102 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 SIGLEC15Q6ZMC9 328 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 ZNF407Q9C0G0 2248 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 A0A0B4J2C4 111 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 ZNF876PQ49A33 203 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 NOTCH4Q99466 2003 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 IGHV3-38A0A0C4DH36 116 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 EPOPA6NHQ4 379 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 DKK1O94907 266 aa8.61□□□□□ -1.03
PBX1-212ENST00000540236 PRR7Q8TB68 274 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 H3BRN7 92 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 PRO0461Q9UI25 63 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 BRCA2P51587 3418 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 IGKV1D-37A0A075B6S9 117 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 THAP8Q8NA92 274 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 TMEM167AQ8TBQ9 72 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 PROP1O75360 226 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 C11orf53Q8IXP5 236 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 IGHV3-11P01762 117 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 PIP4P2Q8N4L2 257 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 C14orf132Q9NPU4 83 aa8.6□□□□□ -1.03
PBX1-212ENST00000540236 NHLRC4P0CG21 123 aaPredicted RBP8.59□□□□□ -1.03
PBX1-212ENST00000540236 EDN2P20800 178 aa8.59□□□□□ -1.03
PBX1-212ENST00000540236 PVRIGQ6DKI7 326 aa8.59□□□□□ -1.03
PBX1-212ENST00000540236 KRTAP27-1Q3LI81 207 aa8.59□□□□□ -1.03
PBX1-212ENST00000540236 SLC50A1Q9BRV3 221 aa8.59□□□□□ -1.03
PBX1-212ENST00000540236 TRAV25A0A0B4J276 109 aa8.59□□□□□ -1.03
PBX1-212ENST00000540236 LRRC75A-AS1Q8N1F1 130 aa8.59□□□□□ -1.03
PBX1-212ENST00000540236 RNF185Q96GF1 192 aa8.59□□□□□ -1.04
PBX1-212ENST00000540236 MLST8Q9BVC4 326 aa8.59□□□□□ -1.04
PBX1-212ENST00000540236 A8MZ25 164 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 INTS1Q8N201 2190 aaKnown RBP8.58□□□□□ -1.04
PBX1-212ENST00000540236 EIF4EBP1Q13541 118 aaPredicted RBP8.58□□□□□ -1.04
PBX1-212ENST00000540236 NDUFA12Q9UI09 145 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 VCANP13611 3396 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 A0A087WVE0 104 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 CCL21O00585 134 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 GFRALQ6UXV0 394 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 KNCNA6PVL3 124 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 LINC01559Q495D7 138 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 TOMM6Q96B49 74 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 SNURFQ9Y675 71 aa8.58□□□□□ -1.04
PBX1-212ENST00000540236 EML6Q6ZMW3 1958 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 ATOX1O00244 68 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 UBE2L6O14933 153 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 C8orf31Q8N9H6 132 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 COL5A1P20908 1838 aaPredicted RBP8.57□□□□□ -1.04
PBX1-212ENST00000540236 H7C423 109 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 LEPROTO15243 131 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 LINC00158P58513 81 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 PIFOQ8TCI5 191 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 PTPRSQ13332 1948 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 CPAMD8Q8IZJ3 1885 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 Q6ZSR3 168 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 SIGLEC9Q9Y336 463 aa8.57□□□□□ -1.04
PBX1-212ENST00000540236 KIAA0100Q14667 2235 aaKnown RBP8.57□□□□□ -1.04
PBX1-212ENST00000540236 SRRM5B3KS81 715 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 IGHV3-30P01768 117 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 IGHV3-30-5P0DP03 117 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 FAM27E3Q08E93 113 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 C9orf106Q8NAJ2 232 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 F6UB75 175 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 ELANEP08246 267 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 F5P12259 2224 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 IGHV1-3A0A0C4DH29 117 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 IGLV2-11P01706 119 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 C1orf195Q5TG92 126 aa8.56□□□□□ -1.04
PBX1-212ENST00000540236 MBD3L2Q8NHZ7 208 aaPredicted RBP8.56□□□□□ -1.04
PBX1-212ENST00000540236 RANBP2P49792 3224 aaKnown RBP8.55□□□□□ -1.04
PBX1-212ENST00000540236 SS18L1O75177 396 aaPredicted RBP8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms