RNA–Protein interactions for RNA: ENST00000539934.5

DDX55-206, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 2,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-206ENST00000539934 DRAM1Q8N682 238 aa9.87□□□□□ -0.83
DDX55-206ENST00000539934 POM121L12Q8N7R1 296 aa9.87□□□□□ -0.83
DDX55-206ENST00000539934 ODF3Q96PU9 254 aa9.87□□□□□ -0.83
DDX55-206ENST00000539934 DYNLRB1Q9NP97 96 aa9.87□□□□□ -0.83
DDX55-206ENST00000539934 HLA-DMBP28068 263 aa9.87□□□□□ -0.83
DDX55-206ENST00000539934 FAM53AQ6NSI3 398 aaPredicted RBP9.87□□□□□ -0.83
DDX55-206ENST00000539934 MAPK1IP1LQ8NDC0 245 aa9.87□□□□□ -0.83
DDX55-206ENST00000539934 FAM19A4Q96LR4 140 aa9.87□□□□□ -0.83
DDX55-206ENST00000539934 NHP2Q9NX24 153 aaKnown RBP9.87□□□□□ -0.83
DDX55-206ENST00000539934 DOCK11Q5JSL3 2073 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 DSCAML1Q8TD84 2053 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 CTXND1A0A1B0GTU2 59 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 A8MWV9 139 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 E7EQL1 145 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 TRAV13-1A0A0B4J241 112 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 FRMD6-AS1P0C7T7 363 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 GNB1P62873 340 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 TREML4Q6UXN2 200 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 PQLC2Q6ZP29 291 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 ODF3L1Q8IXM7 274 aa9.86□□□□□ -0.83
DDX55-206ENST00000539934 TCRBV4S1A1TA0A5B7 111 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 DEFB108AA8MXU0 73 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 C11orf94C9JXX5 98 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 H7C1H1 209 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 CHEK1O14757 476 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 ELANEP08246 267 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 CD69Q07108 199 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 RTL8BQ17RB0 113 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 PIFOQ8TCI5 191 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 CCL13Q99616 98 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 PEMTQ9UBM1 199 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 TIMM9Q9Y5J7 89 aa9.85□□□□□ -0.83
DDX55-206ENST00000539934 EPM2AB3EWF7 344 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 C1orf159Q96HA4 380 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 GAFA1Q96PS6 74 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 TRAV8-2A0A0B4J237 113 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 C12orf74Q32Q52 190 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 FAM216BQ8N7L0 139 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 CCL17Q92583 94 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 MRPL53Q96EL3 112 aaKnown RBP9.84□□□□□ -0.83
DDX55-206ENST00000539934 AGPAT4-IT1Q9H0P7 198 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 V9GYV3 84 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 ARFGEF3Q5TH69 2177 aa9.84□□□□□ -0.83
DDX55-206ENST00000539934 NXPH3O95157 252 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 PLAUP00749 431 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 URB1-AS1Q96HZ7 61 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 MRPL20Q9BYC9 149 aaKnown RBP9.83□□□□□ -0.84
DDX55-206ENST00000539934 CALYQ9NYX4 217 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 TRAV2A0A0B4J234 112 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 SSSCA1O60232 199 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 P0DMU3 169 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 FAM231AP0DMU4 169 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 FAM231CP0DMU5 169 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 AMN1Q8IY45 258 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 SHANK2-AS3Q9BTD1 123 aa9.83□□□□□ -0.84
DDX55-206ENST00000539934 A0A0G2JRQ6 117 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 IGKV1-39P01597 117 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 IGKV1D-39P04432 117 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 SCGB1C2P0DMR2 95 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 HLA-DRB4P13762 266 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 RPL30P62888 115 aaKnown RBP9.82□□□□□ -0.84
DDX55-206ENST00000539934 HLA-DRB4X5D2U9 266 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 TRAV8-1A0A0A6YYK1 113 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 C9JCJ5 164 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 HILS1P60008 231 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 LINC00173Q6ZV60 143 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 LINC00311Q8N616 119 aa9.82□□□□□ -0.84
DDX55-206ENST00000539934 F11RQ9Y624 299 aaKnown RBP9.82□□□□□ -0.84
DDX55-206ENST00000539934 ANK2Q01484 3957 aa9.81□□□□□ -0.84
DDX55-206ENST00000539934 CST7O76096 145 aa9.81□□□□□ -0.84
DDX55-206ENST00000539934 ZNF816Q0VGE8 651 aaPredicted RBP9.81□□□□□ -0.84
DDX55-206ENST00000539934 WFDC3Q8IUB2 231 aa9.81□□□□□ -0.84
DDX55-206ENST00000539934 LINC01561Q8N1V8 128 aa9.81□□□□□ -0.84
DDX55-206ENST00000539934 CHAC1Q9BUX1 264 aa9.81□□□□□ -0.84
DDX55-206ENST00000539934 CACNG5Q9UF02 275 aa9.81□□□□□ -0.84
DDX55-206ENST00000539934 NDUFB4O95168 129 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 IGKV1-5P01602 117 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 MGST1P10620 155 aaKnown RBP9.8□□□□□ -0.84
DDX55-206ENST00000539934 LOXP28300 417 aaPredicted RBP9.8□□□□□ -0.84
DDX55-206ENST00000539934 LOXL3P58215 753 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 C17orf58Q2M2W7 97 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 TRBV20OR9-2A0A075B6H5 130 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 HAX1O00165 279 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 EIF4EBP1Q13541 118 aaPredicted RBP9.8□□□□□ -0.84
DDX55-206ENST00000539934 VMA21Q3ZAQ7 101 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 RPP25LQ8N5L8 163 aaKnown RBP9.8□□□□□ -0.84
DDX55-206ENST00000539934 LINC00482Q8N8I6 264 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 LINC01600Q96MT4 127 aa9.8□□□□□ -0.84
DDX55-206ENST00000539934 ZNF331Q9NQX6 463 aaPredicted RBP9.8□□□□□ -0.84
DDX55-206ENST00000539934 FAM240AA0A1B0GVK7 77 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 C17orf98A8MV24 154 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 IGKCP01834 107 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 CGB3P0DN86 165 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 CGB7P0DN87 165 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 Q6ZRM9 215 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 SLC25A48Q6ZT89 311 aaKnown RBP9.79□□□□□ -0.84
DDX55-206ENST00000539934 TMEM158Q8WZ71 300 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 DSCR8Q96T75 97 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 CCL19Q99731 98 aa9.79□□□□□ -0.84
DDX55-206ENST00000539934 HHLA3Q9XRX5 114 aa9.79□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms