RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 ANXA2RQ3ZCQ2 193 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 FAM159AQ6UWV7 190 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 GFRA4Q9GZZ7 299 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 NAT8BQ9UHF3 227 aa11.84□□□□□ -0.51
TRAF3-204ENST00000539721 RBMY1A1P0DJD3 496 aaKnown RBP11.83□□□□□ -0.52
TRAF3-204ENST00000539721 RBMY1CP0DJD4 496 aa11.83□□□□□ -0.52
TRAF3-204ENST00000539721 RBMY1FQ15415 496 aaKnown RBP11.83□□□□□ -0.52
TRAF3-204ENST00000539721 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.83□□□□□ -0.52
TRAF3-204ENST00000539721 GTSF1Q8WW33 167 aa11.83□□□□□ -0.52
TRAF3-204ENST00000539721 YPEL4Q96NS1 127 aa11.83□□□□□ -0.52
TRAF3-204ENST00000539721 PKD1L1Q8TDX9 2849 aa11.83□□□□□ -0.52
TRAF3-204ENST00000539721 FAM231BA6NCW3 169 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 HIGD1CA8MV81 97 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 KRTAP21-3Q3LHN1 58 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 C20orf144Q9BQM9 153 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 TGIF2-C20orf24A0A0A6YYL0 155 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 NUP35Q8NFH5 326 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 KCNS1Q96KK3 526 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 PGLYRP4Q96LB8 373 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 C1QTNF4Q9BXJ3 329 aa11.82□□□□□ -0.52
TRAF3-204ENST00000539721 IGHV1OR15-1A0A075B7D0 117 aa11.81□□□□□ -0.52
TRAF3-204ENST00000539721 LOC102724200A0A096LPH7 203 aaPredicted RBP11.81□□□□□ -0.52
TRAF3-204ENST00000539721 CXCL1P09341 107 aa11.81□□□□□ -0.52
TRAF3-204ENST00000539721 ZNF575Q86XF7 245 aa11.81□□□□□ -0.52
TRAF3-204ENST00000539721 TPPP3Q9BW30 176 aa11.81□□□□□ -0.52
TRAF3-204ENST00000539721 TRAV9-1A0A075B6T8 112 aa11.8□□□□□ -0.52
TRAF3-204ENST00000539721 SPINK4O60575 86 aa11.8□□□□□ -0.52
TRAF3-204ENST00000539721 GIG44P09565 113 aaPredicted RBP11.8□□□□□ -0.52
TRAF3-204ENST00000539721 FER1L6-AS1Q8NA97 138 aa11.8□□□□□ -0.52
TRAF3-204ENST00000539721 BTF3L4Q96K17 158 aa11.8□□□□□ -0.52
TRAF3-204ENST00000539721 LINC01587Q99440 93 aa11.8□□□□□ -0.52
TRAF3-204ENST00000539721 CSTL1Q9H114 145 aa11.8□□□□□ -0.52
TRAF3-204ENST00000539721 TRBV24-1A0A075B6N3 115 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 COLCA2A8K830 154 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 GNRH2O43555 120 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 TYMSP04818 313 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 IGHV4-30-4P0DP06 118 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 ASIPP42127 132 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 FOXA3P55318 350 aaPredicted RBP11.79□□□□□ -0.52
TRAF3-204ENST00000539721 TDRG1Q3Y452 100 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 TMEM208Q9BTX3 173 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 IGLC6P0CF74 106 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
TRAF3-204ENST00000539721 PYGO2Q9BRQ0 406 aa11.79□□□□□ -0.52
TRAF3-204ENST00000539721 IGHV3OR16-12A0A075B7B8 117 aa11.78□□□□□ -0.52
TRAF3-204ENST00000539721 HTN1P15515 57 aa11.78□□□□□ -0.52
TRAF3-204ENST00000539721 LYZL1Q6UWQ5 148 aa11.78□□□□□ -0.52
TRAF3-204ENST00000539721 C1orf158Q8N1D5 194 aa11.78□□□□□ -0.52
TRAF3-204ENST00000539721 TMEM256Q8N2U0 113 aa11.78□□□□□ -0.52
TRAF3-204ENST00000539721 FAM210BQ96KR6 192 aa11.78□□□□□ -0.52
TRAF3-204ENST00000539721 TP53TG3Q9ULZ0 132 aa11.78□□□□□ -0.52
TRAF3-204ENST00000539721 CBY3A6NI87 242 aa11.77□□□□□ -0.52
TRAF3-204ENST00000539721 H3BVH4 76 aa11.77□□□□□ -0.52
TRAF3-204ENST00000539721 APOC4P55056 127 aa11.77□□□□□ -0.52
TRAF3-204ENST00000539721 MRPL54Q6P161 138 aaKnown RBP11.77□□□□□ -0.52
TRAF3-204ENST00000539721 BORCS7Q96B45 105 aa11.77□□□□□ -0.52
TRAF3-204ENST00000539721 GOLT1BQ9Y3E0 138 aa11.77□□□□□ -0.52
TRAF3-204ENST00000539721 TIMM8BQ9Y5J9 83 aaPredicted RBP11.77□□□□□ -0.52
TRAF3-204ENST00000539721 TRGV11A0A075B6L2 103 aa11.77□□□□□ -0.53
TRAF3-204ENST00000539721 KIR2DL5BA0A0G2JN68 375 aa11.77□□□□□ -0.53
TRAF3-204ENST00000539721 KIR2DL5BA0A0G2JPC4 375 aa11.77□□□□□ -0.53
TRAF3-204ENST00000539721 DNLZQ5SXM8 178 aa11.77□□□□□ -0.53
TRAF3-204ENST00000539721 KIR2DL5AQ8N109 375 aa11.77□□□□□ -0.53
TRAF3-204ENST00000539721 KIR2DL5BQ8NHK3 375 aa11.77□□□□□ -0.53
TRAF3-204ENST00000539721 ARMS2P0C7Q2 107 aa11.76□□□□□ -0.53
TRAF3-204ENST00000539721 CTRLP40313 264 aa11.76□□□□□ -0.53
TRAF3-204ENST00000539721 CSNK1G2-AS1Q8NCQ2 148 aa11.76□□□□□ -0.53
TRAF3-204ENST00000539721 LINC00467Q9BRT7 94 aa11.76□□□□□ -0.53
TRAF3-204ENST00000539721 MUC21A0A0G2JKD1 596 aa11.75□□□□□ -0.53
TRAF3-204ENST00000539721 MUC21A0A140T8X8 626 aa11.75□□□□□ -0.53
TRAF3-204ENST00000539721 A0A1B0GUT8 65 aa11.75□□□□□ -0.53
TRAF3-204ENST00000539721 F2Z2F3 143 aa11.75□□□□□ -0.53
TRAF3-204ENST00000539721 RAB5AP20339 215 aa11.75□□□□□ -0.53
TRAF3-204ENST00000539721 IGHV3-16A0A0C4DH30 117 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 SNAI2O43623 268 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 OR5AL1P0C617 328 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 MED14OSP0DP75 135 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 RNASE3P12724 160 aaKnown RBP11.74□□□□□ -0.53
TRAF3-204ENST00000539721 SSTP61278 116 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 ATP5L2Q7Z4Y8 100 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 DNAH3Q8TD57 4116 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 PRM2P04554 102 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 RIGQ13278 110 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 KPRPQ5T749 579 aaPredicted RBP11.74□□□□□ -0.53
TRAF3-204ENST00000539721 SSBP4Q9BWG4 385 aaPredicted RBP11.74□□□□□ -0.53
TRAF3-204ENST00000539721 MDFICQ9P1T7 246 aa11.74□□□□□ -0.53
TRAF3-204ENST00000539721 A8MZ25 164 aa11.73□□□□□ -0.53
TRAF3-204ENST00000539721 FRMD6-AS1P0C7T7 363 aa11.73□□□□□ -0.53
TRAF3-204ENST00000539721 RPS10P46783 165 aaKnown RBP11.73□□□□□ -0.53
TRAF3-204ENST00000539721 OR10AG1Q8NH19 301 aa11.73□□□□□ -0.53
TRAF3-204ENST00000539721 A0A1B0GXF2 115 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 CAMPP49913 170 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 HBBP68871 147 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 ZNF705AQ6ZN79 300 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-204ENST00000539721 PHLDA3Q9Y5J5 127 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 UBE2CO00762 179 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 SPRY2O43597 315 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 PRB2P02812 416 aaPredicted RBP11.72□□□□□ -0.53
TRAF3-204ENST00000539721 RAB4BP61018 213 aa11.72□□□□□ -0.53
TRAF3-204ENST00000539721 CACNG7P62955 275 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms