RNA–Protein interactions for RNA: ENST00000539599.5

UBE3B-210, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best)

Gene UBE3B, Length 2,763 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-210ENST00000539599 JMJD8Q96S16 334 aa10.69□□□□□ -0.7
UBE3B-210ENST00000539599 OR2K2Q8NGT1 345 aa10.69□□□□□ -0.7
UBE3B-210ENST00000539599 NBPF19A0A087WUL8 3843 aa10.68□□□□□ -0.7
UBE3B-210ENST00000539599 TLN2Q9Y4G6 2542 aa10.68□□□□□ -0.7
UBE3B-210ENST00000539599 ANKRD17O75179 2603 aaKnown RBP10.68□□□□□ -0.7
UBE3B-210ENST00000539599 AGRNO00468 2067 aa10.68□□□□□ -0.7
UBE3B-210ENST00000539599 ODF1Q14990 250 aa10.68□□□□□ -0.7
UBE3B-210ENST00000539599 U3KQE9 123 aa10.68□□□□□ -0.7
UBE3B-210ENST00000539599 BOD1L2Q8IYS8 172 aa10.68□□□□□ -0.7
UBE3B-210ENST00000539599 NRACQ8N912 160 aa10.68□□□□□ -0.7
UBE3B-210ENST00000539599 AKAP9Q99996 3911 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 IGLV2-18A0A075B6J9 118 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 GNRH2O43555 120 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 CD5LO43866 347 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 C19orf54Q5BKX5 351 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 NEGR1Q7Z3B1 354 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 RPL39LQ96EH5 51 aaKnown RBP10.67□□□□□ -0.7
UBE3B-210ENST00000539599 TMEM160Q9NX00 188 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 HIF1ANQ9NWT6 349 aa10.67□□□□□ -0.7
UBE3B-210ENST00000539599 RBAKDNA6NC62 111 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 FCER1GP30273 86 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 RNASE4P34096 147 aaKnown RBP10.66□□□□□ -0.7
UBE3B-210ENST00000539599 C14orf178Q8N769 122 aaPredicted RBP10.66□□□□□ -0.7
UBE3B-210ENST00000539599 CCL19Q99731 98 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 PTPN13Q12923 2485 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 SMIM17P0DL12 118 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 C9orf47Q6ZRZ4 202 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 HHLA3Q9XRX5 114 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 ZNF462Q96JM2 2506 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 MUC4Q99102 2169 aa10.66□□□□□ -0.7
UBE3B-210ENST00000539599 A1L4Q6 167 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 TMEM8BA6NDV4 472 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 H3BUT2 72 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 RAB9AP51151 201 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 RBX1P62877 108 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 ZFAND2AQ8N6M9 145 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 ARL6IP6Q8N6S5 226 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 MRPL35Q9NZE8 188 aaKnown RBP10.65□□□□□ -0.7
UBE3B-210ENST00000539599 K7ERJ3 54 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 ATP5J2P56134 94 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 ANXA2RQ3ZCQ2 193 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 ADAMTSL5Q6ZMM2 481 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 OR4X2Q8NGF9 303 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 PRORYQ9H606 182 aa10.65□□□□□ -0.7
UBE3B-210ENST00000539599 ZC2HC1BQ5TFG8 222 aa10.65□□□□□ -0.71
UBE3B-210ENST00000539599 MGPP08493 103 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 SRSF2Q01130 221 aaKnown RBP10.64□□□□□ -0.71
UBE3B-210ENST00000539599 TMEM190Q8WZ59 177 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 JPT2Q9H910 190 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 TEX15Q9BXT5 2789 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 IGKV3-20P01619 116 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 PPBPP02775 128 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 KLK9Q2XQG4 91 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 HIST2H2BDQ6DRA6 164 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 Q8N8P6 123 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 KLK9Q9UKQ9 250 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 MYO9AB2RTY4 2548 aa10.64□□□□□ -0.71
UBE3B-210ENST00000539599 S100A4P26447 101 aaKnown RBP10.63□□□□□ -0.71
UBE3B-210ENST00000539599 PIMREGQ9BSJ6 248 aa10.63□□□□□ -0.71
UBE3B-210ENST00000539599 NXT2Q9NPJ8 142 aaKnown RBP10.63□□□□□ -0.71
UBE3B-210ENST00000539599 SOCS3O14543 225 aa10.63□□□□□ -0.71
UBE3B-210ENST00000539599 GCSHP23434 173 aa10.63□□□□□ -0.71
UBE3B-210ENST00000539599 FXYD2P54710 66 aa10.63□□□□□ -0.71
UBE3B-210ENST00000539599 C10orf105Q8TEF2 133 aa10.63□□□□□ -0.71
UBE3B-210ENST00000539599 RHPN1-AS1Q9BWJ2 59 aa10.63□□□□□ -0.71
UBE3B-210ENST00000539599 S100A7P31151 101 aa10.62□□□□□ -0.71
UBE3B-210ENST00000539599 MAPKAPK5-AS1Q8N8E1 139 aa10.62□□□□□ -0.71
UBE3B-210ENST00000539599 FAM223BA6NKX1 122 aa10.62□□□□□ -0.71
UBE3B-210ENST00000539599 IGKCP01834 107 aa10.62□□□□□ -0.71
UBE3B-210ENST00000539599 FAM223AQ8IWN6 122 aa10.62□□□□□ -0.71
UBE3B-210ENST00000539599 C9orf139Q6ZV77 190 aa10.61□□□□□ -0.71
UBE3B-210ENST00000539599 OR1N2Q8NGR9 330 aa10.61□□□□□ -0.71
UBE3B-210ENST00000539599 NPFFR1Q9GZQ6 430 aa10.61□□□□□ -0.71
UBE3B-210ENST00000539599 LAGE3Q14657 143 aa10.61□□□□□ -0.71
UBE3B-210ENST00000539599 SMIM15Q7Z3B0 74 aa10.61□□□□□ -0.71
UBE3B-210ENST00000539599 OR10J6PQ8NGY7 276 aa10.61□□□□□ -0.71
UBE3B-210ENST00000539599 RASL10AQ92737 203 aa10.61□□□□□ -0.71
UBE3B-210ENST00000539599 SFTPCP11686 197 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 DUX5Q96PT3 197 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 CST9LQ9H4G1 147 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 SETD2Q9BYW2 2564 aaPredicted RBP10.6□□□□□ -0.71
UBE3B-210ENST00000539599 SONP18583 2426 aaKnown RBP10.6□□□□□ -0.71
UBE3B-210ENST00000539599 SAP30O75446 220 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 PCP4P48539 62 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 DPF1Q92782 380 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 PEF1Q9UBV8 284 aaKnown RBP10.6□□□□□ -0.71
UBE3B-210ENST00000539599 PHLDA3Q9Y5J5 127 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 NF1P21359 2839 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 GAGE12BA1L429 117 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 A6NDX4 124 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 LINC01546A6NGU7 62 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 NDUFA4O00483 81 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 IGHV4-59P01825 116 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 IGHG2P01859 326 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 CLEC2AQ6UVW9 174 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 ZMAT4Q9H898 229 aa10.6□□□□□ -0.71
UBE3B-210ENST00000539599 EMP1P54849 157 aa10.59□□□□□ -0.71
UBE3B-210ENST00000539599 HSD52Q0P140 79 aa10.59□□□□□ -0.71
UBE3B-210ENST00000539599 MEGF9Q9H1U4 602 aa10.59□□□□□ -0.71
UBE3B-210ENST00000539599 NIPBLQ6KC79 2804 aaeCLIP10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.9 ms