RNA–Protein interactions for RNA: ENST00000539589.5

PACSIN3-211, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PACSIN3, Length 2,009 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-211ENST00000539589 UBE2E2Q96LR5 201 aa15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 SETXQ7Z333 2677 aaKnown RBP15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 C2orf70A6NJV1 201 aa15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 MRPL51Q4U2R6 128 aaKnown RBP15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 PRSS3P2Q8NHM4 247 aa15.29■□□□□ 0.04
PACSIN3-211ENST00000539589 LEPROTL1O95214 131 aa15.28■□□□□ 0.04
PACSIN3-211ENST00000539589 LGALS1P09382 135 aaKnown RBP15.28■□□□□ 0.04
PACSIN3-211ENST00000539589 PRELID3AQ96N28 172 aa15.28■□□□□ 0.04
PACSIN3-211ENST00000539589 AP5S1Q9NUS5 200 aa15.28■□□□□ 0.04
PACSIN3-211ENST00000539589 FOSL1P15407 271 aa15.27■□□□□ 0.04
PACSIN3-211ENST00000539589 FA2HQ7L5A8 372 aa15.27■□□□□ 0.04
PACSIN3-211ENST00000539589 EDN2P20800 178 aa15.27■□□□□ 0.03
PACSIN3-211ENST00000539589 ID1P41134 155 aa15.27■□□□□ 0.03
PACSIN3-211ENST00000539589 OR8A1Q8NGG7 326 aa15.27■□□□□ 0.03
PACSIN3-211ENST00000539589 TMEM70Q9BUB7 260 aa15.27■□□□□ 0.03
PACSIN3-211ENST00000539589 MSRB1Q9NZV6 116 aa15.27■□□□□ 0.03
PACSIN3-211ENST00000539589 IGHV4OR15-8A0A075B7B6 117 aa15.26■□□□□ 0.03
PACSIN3-211ENST00000539589 A0A087WW49 117 aa15.26■□□□□ 0.03
PACSIN3-211ENST00000539589 CKS2P33552 79 aa15.26■□□□□ 0.03
PACSIN3-211ENST00000539589 ZFAND2AQ8N6M9 145 aa15.26■□□□□ 0.03
PACSIN3-211ENST00000539589 PRR9Q5T870 116 aa15.26■□□□□ 0.03
PACSIN3-211ENST00000539589 F8P00451 2351 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 TRAV21A0A0B4J279 112 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 TRBV7-9A0A0J9YWB2 115 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 LINC01006Q8NI28 216 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 C16orf95Q9H693 158 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 PPBPP02775 128 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 DEFB1P60022 68 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 DCANP1Q8TF63 244 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 FAM19A4Q96LR4 140 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 HSPB8Q9UJY1 196 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 SELENOKQ9Y6D0 94 aa15.24■□□□□ 0.03
PACSIN3-211ENST00000539589 F6UB75 175 aa15.23■□□□□ 0.03
PACSIN3-211ENST00000539589 CRXO43186 299 aaPredicted RBP15.23■□□□□ 0.03
PACSIN3-211ENST00000539589 IFI27P40305 119 aaPredicted RBP15.23■□□□□ 0.03
PACSIN3-211ENST00000539589 Q6ZQT7 251 aa15.23■□□□□ 0.03
PACSIN3-211ENST00000539589 RNF185Q96GF1 192 aa15.23■□□□□ 0.03
PACSIN3-211ENST00000539589 MIEN1Q9BRT3 115 aa15.23■□□□□ 0.03
PACSIN3-211ENST00000539589 SIGLEC8Q9NYZ4 499 aa15.23■□□□□ 0.03
PACSIN3-211ENST00000539589 LOC389332A0A1B0GUA5 103 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 J3KRW8 73 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 LGALS9O00182 355 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 DEFB136Q30KP8 78 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 SPATA45Q537H7 98 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 SYS1-DBNDD2H3BUS1 97 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 CACNG7P62955 275 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 SMIM15Q7Z3B0 74 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 OR10AG1Q8NH19 301 aa15.22■□□□□ 0.03
PACSIN3-211ENST00000539589 SNAI2O43623 268 aa15.21■□□□□ 0.03
PACSIN3-211ENST00000539589 SYNJ2BPP57105 145 aa15.21■□□□□ 0.03
PACSIN3-211ENST00000539589 LINC00173Q6ZV60 143 aa15.21■□□□□ 0.03
PACSIN3-211ENST00000539589 WFDC3Q8IUB2 231 aa15.21■□□□□ 0.03
PACSIN3-211ENST00000539589 MAP1LC3CQ9BXW4 147 aa15.21■□□□□ 0.03
PACSIN3-211ENST00000539589 SMKR1H3BMG3 65 aa15.21■□□□□ 0.02
PACSIN3-211ENST00000539589 APRG1Q8IVJ8 170 aa15.21■□□□□ 0.02
PACSIN3-211ENST00000539589 MS4A6AQ9H2W1 248 aa15.21■□□□□ 0.02
PACSIN3-211ENST00000539589 LAMTOR2Q9Y2Q5 125 aa15.21■□□□□ 0.02
PACSIN3-211ENST00000539589 IGHV4-4A0A075B6R2 117 aa15.2■□□□□ 0.02
PACSIN3-211ENST00000539589 C20orf202A1L168 122 aa15.2■□□□□ 0.02
PACSIN3-211ENST00000539589 CYSRT1A8MQ03 144 aa15.2■□□□□ 0.02
PACSIN3-211ENST00000539589 NPYP01303 97 aa15.2■□□□□ 0.02
PACSIN3-211ENST00000539589 HOXD3P31249 432 aaPredicted RBP15.2■□□□□ 0.02
PACSIN3-211ENST00000539589 ATOH7Q8N100 152 aa15.2■□□□□ 0.02
PACSIN3-211ENST00000539589 C11orf44Q8N8P7 122 aa15.2■□□□□ 0.02
PACSIN3-211ENST00000539589 TCF21O43680 179 aa15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 NCR2O95944 276 aa15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 RNASE4P34096 147 aaKnown RBP15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 SPANXN1Q5VSR9 72 aa15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 ZNF705AQ6ZN79 300 aaPredicted RBP15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 CD28P10747 220 aa15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 LBHQ53QV2 105 aaPredicted RBP15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 KHDC1LQ5JSQ8 128 aa15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 C4orf3Q8WVX3 66 aa15.19■□□□□ 0.02
PACSIN3-211ENST00000539589 C2CD3Q4AC94 2353 aa15.18■□□□□ 0.02
PACSIN3-211ENST00000539589 H3BVH4 76 aa15.18■□□□□ 0.02
PACSIN3-211ENST00000539589 PET117Q6UWS5 81 aa15.18■□□□□ 0.02
PACSIN3-211ENST00000539589 DUX3Q96PT4 197 aa15.18■□□□□ 0.02
PACSIN3-211ENST00000539589 JMJD8Q96S16 334 aa15.18■□□□□ 0.02
PACSIN3-211ENST00000539589 TIMM8BQ9Y5J9 83 aaPredicted RBP15.18■□□□□ 0.02
PACSIN3-211ENST00000539589 TRAV9-2A0A087WT02 112 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 SLURP1P55000 103 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 SNRPD3P62318 126 aaKnown RBP15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 SPATA12Q7Z6I5 190 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 MAP1LC3AQ9H492 121 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 NDUFA7O95182 113 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 EVI2AP22794 236 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 KLHL30-AS1Q8NEE0 82 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 OR11H1Q8NG94 326 aa15.17■□□□□ 0.02
PACSIN3-211ENST00000539589 CRLF1O75462 422 aa15.16■□□□□ 0.02
PACSIN3-211ENST00000539589 ASIPP42127 132 aa15.16■□□□□ 0.02
PACSIN3-211ENST00000539589 TFPI2P48307 235 aa15.16■□□□□ 0.02
PACSIN3-211ENST00000539589 ZNF747Q9BV97 191 aa15.16■□□□□ 0.02
PACSIN3-211ENST00000539589 WNK1Q9H4A3 2382 aa15.16■□□□□ 0.02
PACSIN3-211ENST00000539589 S100A4P26447 101 aaKnown RBP15.16■□□□□ 0.02
PACSIN3-211ENST00000539589 ANXA2RQ3ZCQ2 193 aa15.16■□□□□ 0.02
PACSIN3-211ENST00000539589 OR4C46A6NHA9 309 aa15.15■□□□□ 0.02
PACSIN3-211ENST00000539589 TNFRSF6BO95407 300 aa15.15■□□□□ 0.02
PACSIN3-211ENST00000539589 PSMG4Q5JS54 123 aa15.15■□□□□ 0.02
PACSIN3-211ENST00000539589 NIPBLQ6KC79 2804 aaeCLIP15.15■□□□□ 0.02
PACSIN3-211ENST00000539589 KLLNB2CW77 178 aa15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 76.2 ms