RNA–Protein interactions for RNA: ENST00000539097.2

HIF1A-204, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,956 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-204ENST00000539097 HSPB9Q9BQS6 159 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 REG4Q9BYZ8 158 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 PRO0461Q9UI25 63 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 BOKQ9UMX3 212 aaPredicted RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 LAMTOR2Q9Y2Q5 125 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 HSPB11Q9Y547 144 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 U3KQ87 197 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 CCDC141Q6ZP82 1450 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 TRIOO75962 3097 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 DDX60LQ5H9U9 1706 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 PLXNB2O15031 1838 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 PLECQ15149 4684 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 APCP25054 2843 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 LOC110117498A0A087WWA1 95 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 DAPL1A0PJW8 107 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ATG12O94817 140 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 SHBGP04278 402 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 MSNP26038 577 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ROMO1P60602 79 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 PRDX4Q13162 271 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 KCNJ8Q15842 424 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 LINC01554Q52M75 96 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF322Q6U7Q0 402 aaPredicted RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 C10orf99Q6UWK7 81 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 UBL4BQ8N7F7 174 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 OR9Q1Q8NGQ5 310 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ISOC1Q96CN7 298 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ANAPC13Q9BS18 74 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 CXorf21Q9HAI6 301 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 FBXL12Q9NXK8 326 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 UTP11Q9Y3A2 253 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 HDGFL3Q9Y3E1 203 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 RNF213Q63HN8 5207 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 CSMD3Q7Z407 3707 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 DAPK1P53355 1430 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ANKRD11Q6UB99 2663 aaPredicted RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 GGTLC3B5MD39 225 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 CDC42EP2O14613 210 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 MRASO14807 208 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 GNRH2O43555 120 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ARL6IP5O75915 188 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 HLA-DRB1P01911 266 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 PPP1CCP36873 323 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 SPANXN3Q5MJ09 141 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 Q6Q795 121 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 Q6ZS92 163 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 LCA10Q71F78 164 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 NAA40Q86UY6 237 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 KRTAP13-1Q8IUC0 172 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 DEFB123Q8N688 67 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 GDPD1Q8N9F7 314 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 MYOZ3Q8TDC0 251 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 MRPL32Q9BYC8 188 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 COMMD5Q9GZQ3 224 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 TVP23BQ9NYZ1 205 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 ICOSQ9Y6W8 199 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 IFT172Q9UG01 1749 aa0.46□□□□□ -2.34
HIF1A-204ENST00000539097 FASNP49327 2511 aaKnown RBP0.46□□□□□ -2.34
HIF1A-204ENST00000539097 NIPBLQ6KC79 2804 aaeCLIP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 UBR3Q6ZT12 1888 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 DSTQ03001 7570 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 MAP1LC3B2A6NCE7 125 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 IFITM5A6NNB3 132 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF670-ZNF695F2Z2N8 137 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 ZNF737O75373 536 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 IGHV1-69P01742 117 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 HIST1H1BP16401 226 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 SELENOWP63302 87 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 C1DQ13901 141 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 SPA17Q15506 151 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 Q5BKY6 102 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 PYY3Q5JQD4 70 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 FKBP1CQ5VVH2 108 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 Q6ZTI0 123 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 LINC00269Q8N2A0 174 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 C2orf15Q8WU43 125 aaKnown RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 PP6455Q8WZ26 134 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 SLC25A44Q96H78 314 aaPredicted RBP0.45□□□□□ -2.34
HIF1A-204ENST00000539097 PRADC1Q9BSG0 188 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 TMEM147Q9BVK8 224 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 MAP1LC3BQ9GZQ8 125 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 BCL2L10Q9HD36 194 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 C14orf132Q9NPU4 83 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 FAM206AQ9NX38 181 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 OR5AC2Q9NZP5 309 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 DOK5Q9P104 306 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 DNAJC12Q9UKB3 198 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CCL26Q9Y258 94 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 IER3IP1Q9Y5U9 82 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 IGSF10Q6WRI0 2623 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 HECTD1Q9ULT8 2610 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CLIP1P30622 1438 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CFAP46Q8IYW2 2715 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 A0A0D9SG52 128 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 TRBV10-2A0A0K0K1G8 114 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CCDC160A6NGH7 325 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 ODF3BA8MYP8 253 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 J3KT08 172 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 CYB5BO43169 146 aa0.45□□□□□ -2.34
HIF1A-204ENST00000539097 SLC25A20O43772 301 aa0.45□□□□□ -2.34
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms