RNA–Protein interactions for RNA: ENST00000539047.1

VAMP1-207, Transcript of vesicle associated membrane protein 1, humanhuman

TSL 4

Gene VAMP1, Length 565 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP1-207ENST00000539047 A0A1W2PPQ1 181 aa11.34□□□□□ -0.59
VAMP1-207ENST00000539047 CA1P00915 261 aaPredicted RBP11.34□□□□□ -0.59
VAMP1-207ENST00000539047 CXCL1P09341 107 aa11.34□□□□□ -0.59
VAMP1-207ENST00000539047 TCL1AP56279 114 aa11.34□□□□□ -0.59
VAMP1-207ENST00000539047 SMIM27A0A1W2PRY6 76 aa11.33□□□□□ -0.6
VAMP1-207ENST00000539047 S100A4P26447 101 aaKnown RBP11.33□□□□□ -0.6
VAMP1-207ENST00000539047 ASIPP42127 132 aa11.33□□□□□ -0.6
VAMP1-207ENST00000539047 MUC21Q5SSG8 566 aa11.33□□□□□ -0.6
VAMP1-207ENST00000539047 SAMD5Q5TGI4 173 aa11.33□□□□□ -0.6
VAMP1-207ENST00000539047 NEU1Q99519 415 aa11.33□□□□□ -0.6
VAMP1-207ENST00000539047 XCL2Q9UBD3 114 aa11.33□□□□□ -0.6
VAMP1-207ENST00000539047 GOLT1BQ9Y3E0 138 aa11.33□□□□□ -0.6
VAMP1-207ENST00000539047 TRGV11A0A075B6L2 103 aa11.32□□□□□ -0.6
VAMP1-207ENST00000539047 IGHV1OR15-1A0A075B7D0 117 aa11.32□□□□□ -0.6
VAMP1-207ENST00000539047 HIGD1CA8MV81 97 aa11.32□□□□□ -0.6
VAMP1-207ENST00000539047 G3V4G9 280 aa11.32□□□□□ -0.6
VAMP1-207ENST00000539047 SREK1IP1Q8N9Q2 155 aaPredicted RBP11.32□□□□□ -0.6
VAMP1-207ENST00000539047 FER1L6-AS1Q8NA97 138 aa11.32□□□□□ -0.6
VAMP1-207ENST00000539047 PYGO2Q9BRQ0 406 aa11.32□□□□□ -0.6
VAMP1-207ENST00000539047 TPPP3Q9BW30 176 aa11.32□□□□□ -0.6
VAMP1-207ENST00000539047 FAM3BP58499 235 aaPredicted RBP11.31□□□□□ -0.6
VAMP1-207ENST00000539047 KIR3DS1Q14943 382 aa11.31□□□□□ -0.6
VAMP1-207ENST00000539047 ANXA2RQ3ZCQ2 193 aa11.31□□□□□ -0.6
VAMP1-207ENST00000539047 Q8N1Y9 231 aa11.31□□□□□ -0.6
VAMP1-207ENST00000539047 LINC01587Q99440 93 aa11.31□□□□□ -0.6
VAMP1-207ENST00000539047 CSTL1Q9H114 145 aa11.31□□□□□ -0.6
VAMP1-207ENST00000539047 TRRAPQ9Y4A5 3859 aa11.31□□□□□ -0.6
VAMP1-207ENST00000539047 KIR2DL5BA0A0G2JN68 375 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 KIR2DL5BA0A0G2JPC4 375 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 CBY3A6NI87 242 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 F2Z2F3 143 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 CRXO43186 299 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-207ENST00000539047 ZNF324O75467 553 aaPredicted RBP11.3□□□□□ -0.6
VAMP1-207ENST00000539047 GZMBP10144 247 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 ELOBQ15370 118 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 KIR2DL5AQ8N109 375 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 KIR2DL5BQ8NHK3 375 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 PGLYRP4Q96LB8 373 aa11.3□□□□□ -0.6
VAMP1-207ENST00000539047 TRBV24-1A0A075B6N3 115 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 IGKV3D-20A0A0C4DH25 116 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 GRIFINA4D1Z8 144 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 S100A8P05109 93 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 MED14OSP0DP75 135 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 KRTAP10-11P60412 298 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 RIGQ13278 110 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 TDRG1Q3Y452 100 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 COX19Q49B96 90 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 ATP5L2Q7Z4Y8 100 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 C11orf21Q9P2W6 132 aa11.29□□□□□ -0.6
VAMP1-207ENST00000539047 IGHV3OR16-12A0A075B7B8 117 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 A0A1B0GUT8 65 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 A0A1B0GW15 77 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 IGHV4-30-4P0DP06 118 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 CTRLP40313 264 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 NUP35Q8NFH5 326 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 FAM210BQ96KR6 192 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 LINC00467Q9BRT7 94 aa11.28□□□□□ -0.6
VAMP1-207ENST00000539047 VWFP04275 2813 aa11.27□□□□□ -0.6
VAMP1-207ENST00000539047 TGIF2-C20orf24A0A0A6YYL0 155 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 H3BVH4 76 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 UBE2CO00762 179 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 TYMSP04818 313 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 HTN1P15515 57 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 FOXA3P55318 350 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-207ENST00000539047 CACNG7P62955 275 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 ZNF415Q09FC8 603 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 WDR73Q6P4I2 378 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 RASL11AQ6T310 242 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 Q6ZQT7 251 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 GTSF1Q8WW33 167 aa11.27□□□□□ -0.61
VAMP1-207ENST00000539047 TIMM8BQ9Y5J9 83 aaPredicted RBP11.27□□□□□ -0.61
VAMP1-207ENST00000539047 SPINK4O60575 86 aa11.26□□□□□ -0.61
VAMP1-207ENST00000539047 OR5AL1P0C617 328 aa11.26□□□□□ -0.61
VAMP1-207ENST00000539047 IGLC6P0CF74 106 aa11.26□□□□□ -0.61
VAMP1-207ENST00000539047 HBBP68871 147 aa11.26□□□□□ -0.61
VAMP1-207ENST00000539047 DNLZQ5SXM8 178 aa11.26□□□□□ -0.61
VAMP1-207ENST00000539047 MRPL54Q6P161 138 aaKnown RBP11.26□□□□□ -0.61
VAMP1-207ENST00000539047 LYZL1Q6UWQ5 148 aa11.26□□□□□ -0.61
VAMP1-207ENST00000539047 PHLDA3Q9Y5J5 127 aa11.26□□□□□ -0.61
VAMP1-207ENST00000539047 A8MZ25 164 aa11.25□□□□□ -0.61
VAMP1-207ENST00000539047 RBMY1A1P0DJD3 496 aaKnown RBP11.25□□□□□ -0.61
VAMP1-207ENST00000539047 RBMY1CP0DJD4 496 aa11.25□□□□□ -0.61
VAMP1-207ENST00000539047 RAB4BP61018 213 aa11.25□□□□□ -0.61
VAMP1-207ENST00000539047 RBMY1FQ15415 496 aaKnown RBP11.25□□□□□ -0.61
VAMP1-207ENST00000539047 SPANXN1Q5VSR9 72 aa11.25□□□□□ -0.61
VAMP1-207ENST00000539047 SMIM15Q7Z3B0 74 aa11.25□□□□□ -0.61
VAMP1-207ENST00000539047 SYT8Q8NBV8 401 aa11.25□□□□□ -0.61
VAMP1-207ENST00000539047 YPEL4Q96NS1 127 aa11.25□□□□□ -0.61
VAMP1-207ENST00000539047 COLCA2A8K830 154 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 GNRH2O43555 120 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 SNAI2O43623 268 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 MT-ND6P03923 174 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 ARMS2P0C7Q2 107 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 RAB5AP20339 215 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 ZFP82Q8N141 532 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 NOTCH3Q9UM47 2321 aa11.24□□□□□ -0.61
VAMP1-207ENST00000539047 CMYA5Q8N3K9 4069 aa11.23□□□□□ -0.61
VAMP1-207ENST00000539047 IGHV3-16A0A0C4DH30 117 aa11.23□□□□□ -0.61
VAMP1-207ENST00000539047 RPS10P46783 165 aaKnown RBP11.23□□□□□ -0.61
VAMP1-207ENST00000539047 TWIST1Q15672 202 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms