RNA–Protein interactions for RNA: ENST00000538686.6

USP3-203, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best)

Gene USP3, Length 2,077 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-203ENST00000538686 SUMO2P61956 95 aaKnown RBP9.53□□□□□ -0.88
USP3-203ENST00000538686 JPT2Q9H910 190 aa9.53□□□□□ -0.88
USP3-203ENST00000538686 DYNLRB1Q9NP97 96 aa9.53□□□□□ -0.88
USP3-203ENST00000538686 SIT1Q9Y3P8 196 aa9.53□□□□□ -0.88
USP3-203ENST00000538686 ICOSQ9Y6W8 199 aa9.53□□□□□ -0.88
USP3-203ENST00000538686 A0A0J9YX75 114 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 LST1O00453 97 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 PPP1R17O96001 155 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 MAGEA5P43359 124 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 FAM216BQ8N7L0 139 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 AMELXQ99217 191 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 KLK15Q9H2R5 256 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 PEMTQ9UBM1 199 aa9.52□□□□□ -0.88
USP3-203ENST00000538686 INTS1Q8N201 2190 aaKnown RBP9.52□□□□□ -0.88
USP3-203ENST00000538686 F5P12259 2224 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 DOCK7Q96N67 2140 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 IGKV2-40A0A087WW87 121 aaPredicted RBP9.52□□□□□ -0.89
USP3-203ENST00000538686 TRAV13-1A0A0B4J241 112 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 EIF4EBP3O60516 100 aaPredicted RBP9.52□□□□□ -0.89
USP3-203ENST00000538686 IGKV2D-40P01614 121 aaPredicted RBP9.52□□□□□ -0.89
USP3-203ENST00000538686 DLX1P56177 255 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 CCL8P80075 99 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 RNF125Q96EQ8 232 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 DEFB118Q96PH6 123 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 AGPAT4-IT1Q9H0P7 198 aa9.52□□□□□ -0.89
USP3-203ENST00000538686 IGLV4-69A0A075B6H9 119 aa9.51□□□□□ -0.89
USP3-203ENST00000538686 J3QLI3 93 aa9.51□□□□□ -0.89
USP3-203ENST00000538686 TRGV3P03979 118 aa9.51□□□□□ -0.89
USP3-203ENST00000538686 CD59P13987 128 aa9.51□□□□□ -0.89
USP3-203ENST00000538686 TMEM141Q96I45 108 aa9.51□□□□□ -0.89
USP3-203ENST00000538686 SDHAF1A6NFY7 115 aa9.51□□□□□ -0.89
USP3-203ENST00000538686 MUSTN1Q8IVN3 82 aa9.51□□□□□ -0.89
USP3-203ENST00000538686 BEX4Q9NWD9 120 aaPredicted RBP9.51□□□□□ -0.89
USP3-203ENST00000538686 HTTP42858 3142 aa9.5□□□□□ -0.89
USP3-203ENST00000538686 NDUFC2-KCTD14E9PQ53 114 aa9.5□□□□□ -0.89
USP3-203ENST00000538686 M0R381 172 aa9.5□□□□□ -0.89
USP3-203ENST00000538686 IGKV1-17P01599 117 aa9.5□□□□□ -0.89
USP3-203ENST00000538686 ZNF883P0CG24 379 aa9.5□□□□□ -0.89
USP3-203ENST00000538686 C8orf31Q8N9H6 132 aa9.5□□□□□ -0.89
USP3-203ENST00000538686 DSCAML1Q8TD84 2053 aa9.5□□□□□ -0.89
USP3-203ENST00000538686 TRAV26-2A0A0B4J265 109 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 I3L2K1 104 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 LEPROTO15243 131 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 LHBP01229 141 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 TSPEAR-AS2P59090 65 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 SERP2Q8N6R1 65 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 ZNF491Q8N8L2 437 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 PYGO1Q9Y3Y4 419 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 IGHV3-21A0A0B4J1V1 117 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 PINLYPA6NC86 204 aa9.49□□□□□ -0.89
USP3-203ENST00000538686 RPL18AQ02543 176 aaKnown RBP9.49□□□□□ -0.89
USP3-203ENST00000538686 ASXL3Q9C0F0 2248 aa9.48□□□□□ -0.89
USP3-203ENST00000538686 TINCRA0A1B0GVN0 87 aa9.48□□□□□ -0.89
USP3-203ENST00000538686 SPANXN1Q5VSR9 72 aa9.48□□□□□ -0.89
USP3-203ENST00000538686 SDK2Q58EX2 2172 aa9.48□□□□□ -0.89
USP3-203ENST00000538686 IGHV1OR15-9A0A0B4J2B8 117 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 IL11RAQ14626 422 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 DAND5Q8N907 189 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 Q8TAT8 98 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 SMCR5Q8TEV8 140 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 IGHV5-10-1A0A0J9YXX1 117 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 IGKV3-15P01624 115 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 FOLR3P41439 243 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 C3orf36Q3SXR2 165 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 LINC00311Q8N616 119 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 C14orf178Q8N769 122 aaPredicted RBP9.47□□□□□ -0.89
USP3-203ENST00000538686 DCANP1Q8TF63 244 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 TIMM17AQ99595 171 aa9.47□□□□□ -0.89
USP3-203ENST00000538686 TRAV41A0A0B4J266 112 aa9.46□□□□□ -0.89
USP3-203ENST00000538686 OXTP01178 125 aa9.46□□□□□ -0.89
USP3-203ENST00000538686 GATA4P43694 442 aa9.46□□□□□ -0.89
USP3-203ENST00000538686 MRGPRG-AS1Q2M3A8 158 aa9.46□□□□□ -0.89
USP3-203ENST00000538686 FAM19A4Q96LR4 140 aa9.46□□□□□ -0.89
USP3-203ENST00000538686 PRORYQ9H606 182 aa9.46□□□□□ -0.89
USP3-203ENST00000538686 NAV3Q8IVL0 2385 aa9.46□□□□□ -0.89
USP3-203ENST00000538686 CFHR4Q92496 578 aa9.46□□□□□ -0.9
USP3-203ENST00000538686 DSCR8Q96T75 97 aa9.46□□□□□ -0.9
USP3-203ENST00000538686 UPK3BQ9BT76 320 aa9.46□□□□□ -0.9
USP3-203ENST00000538686 IGHV7-4-1A0A0J9YVY3 117 aa9.45□□□□□ -0.9
USP3-203ENST00000538686 UBE2E1P51965 193 aa9.45□□□□□ -0.9
USP3-203ENST00000538686 LINC00477Q96M19 166 aa9.45□□□□□ -0.9
USP3-203ENST00000538686 C1orf43Q9BWL3 253 aa9.45□□□□□ -0.9
USP3-203ENST00000538686 TPSG1Q9NRR2 321 aa9.45□□□□□ -0.9
USP3-203ENST00000538686 ZNRD1Q9P1U0 126 aa9.45□□□□□ -0.9
USP3-203ENST00000538686 TRBV7-1A0A0A6YYK4 115 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 IGKV3D-20A0A0C4DH25 116 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 INAFM2P0DMQ5 153 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 IGHV1-2P23083 117 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 SEC61GP60059 68 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 ZNF876PQ49A33 203 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 SLC25A45Q8N413 288 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 GAFA1Q96PS6 74 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 TIMM21Q9BVV7 248 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 IGIPA6NJ69 53 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 NDUFC2O95298 119 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 PFN2P35080 140 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 DPH3P1Q9H4G8 78 aa9.44□□□□□ -0.9
USP3-203ENST00000538686 TEX22C9J3V5 150 aa9.43□□□□□ -0.9
USP3-203ENST00000538686 RS1O15537 224 aa9.43□□□□□ -0.9
USP3-203ENST00000538686 DEFB119Q8N690 84 aa9.43□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms