RNA–Protein interactions for RNA: ENST00000538654.5

SNHG1-209, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 2,768 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-209ENST00000538654 ZNF672Q499Z4 452 aaPredicted RBP6.97□□□□□ -1.29
SNHG1-209ENST00000538654 ORMDL2Q53FV1 153 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 LYPD2Q6UXB3 125 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 ZNF575Q86XF7 245 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 ARL17AQ8IVW1 177 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 NRACQ8N912 160 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 RBAKDNA6NC62 111 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 A8MWV9 139 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 IGFL2Q6UWQ7 119 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 TEX29Q8N6K0 151 aa6.97□□□□□ -1.29
SNHG1-209ENST00000538654 NBEAQ8NFP9 2946 aa6.96□□□□□ -1.29
SNHG1-209ENST00000538654 CD59P13987 128 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 SRSF9Q13242 221 aaKnown RBP eCLIP6.96□□□□□ -1.3
SNHG1-209ENST00000538654 GFRALQ6UXV0 394 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 SBSPONQ8IVN8 264 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 URB1O60287 2271 aaKnown RBP6.96□□□□□ -1.3
SNHG1-209ENST00000538654 TINCRA0A1B0GVN0 87 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 SCGB1D4Q6XE38 83 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 LINC00336Q6ZUF6 198 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 CCL17Q92583 94 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 SCGB3A1Q96QR1 104 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 CTSZQ9UBR2 303 aa6.96□□□□□ -1.3
SNHG1-209ENST00000538654 FREM2Q5SZK8 3169 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 SVILO95425 2214 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 SRD5A1P18405 259 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 PRSS33Q8NF86 280 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 FDCSPQ8NFU4 85 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 IGFBPL1Q8WX77 278 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 SLC50A1Q9BRV3 221 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 SPANXA1Q9NS26 97 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 MALRD1Q5VYJ5 2156 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 IGHV4-4A0A075B6R2 117 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 ZNF815PA8K554 130 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 TOMM6Q96B49 74 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 PRADC1Q9BSG0 188 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 SMIM2Q9BVW6 85 aa6.95□□□□□ -1.3
SNHG1-209ENST00000538654 ASIPP42127 132 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 EFNA4P52798 201 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 C4orf26Q17RF5 130 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 NEXN-AS1Q8NBZ9 246 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 PRR26Q8N8Z3 221 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 C11orf45Q8TAV5 145 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 Q96MF0 132 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 C21orf62Q9NYP8 219 aa6.94□□□□□ -1.3
SNHG1-209ENST00000538654 ICE1Q9Y2F5 2266 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 IGLV11-55A0A075B6I3 123 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 CENPVL3A0A0U1RRI6 287 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 IGHG4P01861 327 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 TRGV3P03979 118 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 PAPPA-AS1Q5QFB9 102 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 ZFP2Q6ZN57 461 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 IGF1P05019 195 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 CD7P09564 240 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 HERVK_113P61574 105 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 ERCC8Q13216 396 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 SPANXN1Q5VSR9 72 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 NDUFA11Q86Y39 141 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 PLCE1Q9P212 2302 aa6.93□□□□□ -1.3
SNHG1-209ENST00000538654 ABCA1O95477 2261 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 IGKV3D-20A0A0C4DH25 116 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 SCGB1C2P0DMR2 95 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 DYNAPQ8N1N2 210 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 SMAD5-AS1Q9Y6J3 95 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 COL6A3P12111 3177 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 TCL1BO95988 128 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 LPAL2Q16609 132 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 LINC01356Q8N9X3 169 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 NPBQ8NG41 125 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 MDFIQ99750 246 aa6.92□□□□□ -1.3
SNHG1-209ENST00000538654 TRAV26-2A0A0B4J265 109 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 LY6LH3BQJ8 138 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 RHODO00212 210 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 COX6B1P14854 86 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 FAM27E3Q08E93 113 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 ANKRD29Q8N6D5 301 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 FAM215AQ9Y5M1 114 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 IGHV7-4-1A0A0J9YVY3 117 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 H3BVH4 76 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 SNCGO76070 127 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 PPP1R17O96001 155 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 GATA3P23771 443 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 SUMO2P61956 95 aaKnown RBP6.91□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE2BQ13066 116 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE2EQ4V326 116 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE2DQ9UEU5 116 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 S4R3C0 116 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 F8W735 103 aaPredicted RBP6.91□□□□□ -1.3
SNHG1-209ENST00000538654 TIMM23O14925 209 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 COX7A1P24310 79 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 HLA-DMBP28068 263 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 IGFL4Q6B9Z1 124 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 C10orf126Q8N4M7 172 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 PKIGQ9Y2B9 76 aa6.91□□□□□ -1.3
SNHG1-209ENST00000538654 PRUNE2Q8WUY3 3088 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE12JA6NER3 117 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 B5MCH6 92 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 PRYO14603 147 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE7O76087 117 aa6.9□□□□□ -1.3
SNHG1-209ENST00000538654 GAGE12FP0CL80 117 aa6.9□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 49.7 ms