RNA–Protein interactions for RNA: ENST00000537597.1

SRRM4-202, Transcript of serine/arginine repetitive matrix 4, humanhuman

TSL 4

Gene SRRM4, Length 561 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRM4-202ENST00000537597 Q6ZTI0 123 aa10.65□□□□□ -0.7
SRRM4-202ENST00000537597 IGKV3D-20A0A0C4DH25 116 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 SCO2A0A1W2PP80 73 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 RGS13O14921 159 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 GCGP01275 180 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 ZNF674Q2M3X9 581 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 MUC21Q5SSG8 566 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 DNLZQ5SXM8 178 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 RASL10AQ92737 203 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 ZC2HC1AQ96GY0 325 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 DNAH10Q8IVF4 4471 aa10.64□□□□□ -0.71
SRRM4-202ENST00000537597 IGHV4-4A0A075B6R2 117 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 TYMSP04818 313 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 S100A9P06702 114 aaKnown RBP10.63□□□□□ -0.71
SRRM4-202ENST00000537597 DEFB130BP0DP73 79 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 DEFB130AP0DP74 79 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 LGALS9CQ6DKI2 356 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 FAM159AQ6UWV7 190 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 TMEM183AQ8IXX5 376 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 LINC00476Q8WZB0 136 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 PTH2Q96A98 100 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 NDFIP1Q9BT67 221 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 GNG13Q9P2W3 67 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 DNAH2Q9P225 4427 aa10.63□□□□□ -0.71
SRRM4-202ENST00000537597 MUC4Q99102 2169 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 FABP5P3A8MUU1 101 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 SNURFLB1AK76 121 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 IGLL5B9A064 214 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 IGLV2-8P01709 118 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 HOXA5P20719 270 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 BLOC1S1P78537 153 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 POM121L12Q8N7R1 296 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 KCNS1Q96KK3 526 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 SPXQ9BT56 116 aa10.62□□□□□ -0.71
SRRM4-202ENST00000537597 TRGV11A0A075B6L2 103 aa10.61□□□□□ -0.71
SRRM4-202ENST00000537597 NDUFS6O75380 124 aaKnown RBP10.61□□□□□ -0.71
SRRM4-202ENST00000537597 ATP5G1P05496 136 aa10.61□□□□□ -0.71
SRRM4-202ENST00000537597 BCL2P10415 239 aa10.61□□□□□ -0.71
SRRM4-202ENST00000537597 RNASE3P12724 160 aaKnown RBP10.61□□□□□ -0.71
SRRM4-202ENST00000537597 C9orf85Q96MD7 179 aa10.61□□□□□ -0.71
SRRM4-202ENST00000537597 GAGE12BA1L429 117 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 KRBOX1C9JBD0 128 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 TEX46H3BTG2 121 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 GAGE7O76087 117 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 GAGE12FP0CL80 117 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 GAGE12GP0CL81 117 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 GAGE12IP0CL82 117 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 MEF2BQ02080 365 aaPredicted RBP10.6□□□□□ -0.71
SRRM4-202ENST00000537597 ZNF415Q09FC8 603 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 DERL1Q9BUN8 251 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 VAX2Q9UIW0 290 aa10.6□□□□□ -0.71
SRRM4-202ENST00000537597 TAGLN2P37802 199 aaKnown RBP10.59□□□□□ -0.71
SRRM4-202ENST00000537597 AKR1C3P42330 323 aa10.59□□□□□ -0.71
SRRM4-202ENST00000537597 TMEM88Q6PEY1 159 aa10.59□□□□□ -0.71
SRRM4-202ENST00000537597 TEX261Q6UWH6 196 aa10.59□□□□□ -0.71
SRRM4-202ENST00000537597 TRBV20OR9-2A0A075B6H5 130 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 H3BNG1 76 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 PDE6DO43924 150 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 SH2D1AO60880 128 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 RPL35P42766 123 aaKnown RBP10.58□□□□□ -0.72
SRRM4-202ENST00000537597 UBE2G1P62253 170 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 LINC01559Q495D7 138 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 ZNF506Q5JVG8 444 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 BAGE2Q86Y30 109 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 VSIG2Q96IQ7 327 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 SDF2L1Q9HCN8 221 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 SCRT2Q9NQ03 307 aa10.58□□□□□ -0.72
SRRM4-202ENST00000537597 TRGV1A0A0A0MS02 117 aa10.57□□□□□ -0.72
SRRM4-202ENST00000537597 FHL2Q14192 279 aa10.57□□□□□ -0.72
SRRM4-202ENST00000537597 PIK3CD-AS1Q5SR53 167 aa10.57□□□□□ -0.72
SRRM4-202ENST00000537597 NDUFAF3Q9BU61 184 aa10.57□□□□□ -0.72
SRRM4-202ENST00000537597 MRPL16Q9NX20 251 aaKnown RBP10.57□□□□□ -0.72
SRRM4-202ENST00000537597 DNAH17Q9UFH2 4485 aa10.56□□□□□ -0.72
SRRM4-202ENST00000537597 M0R2P5 195 aa10.56□□□□□ -0.72
SRRM4-202ENST00000537597 IFNA1P01562 189 aa10.56□□□□□ -0.72
SRRM4-202ENST00000537597 FAM162BQ5T6X4 162 aa10.56□□□□□ -0.72
SRRM4-202ENST00000537597 SMIM12Q96EX1 92 aa10.56□□□□□ -0.72
SRRM4-202ENST00000537597 NAGKQ9UJ70 344 aa10.56□□□□□ -0.72
SRRM4-202ENST00000537597 FAT2Q9NYQ8 4349 aa10.55□□□□□ -0.72
SRRM4-202ENST00000537597 NACAE9PAV3 2078 aa10.55□□□□□ -0.72
SRRM4-202ENST00000537597 RAB19A4D1S5 217 aa10.55□□□□□ -0.72
SRRM4-202ENST00000537597 RBFOX3A6NFN3 312 aa10.55□□□□□ -0.72
SRRM4-202ENST00000537597 F5H768 121 aa10.55□□□□□ -0.72
SRRM4-202ENST00000537597 IL36BQ9NZH7 164 aa10.55□□□□□ -0.72
SRRM4-202ENST00000537597 FRAS1Q86XX4 4008 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 C19orf71A6NCJ1 209 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 PGPEP1LA6NFU8 196 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 TMEM250H0YL14 139 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 CXCL1P09341 107 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 HTN3P15516 51 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 C15orf53Q8NAA6 179 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 NHLRC2Q8NBF2 726 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 ZNF479Q96JC4 524 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 FAM210AQ96ND0 272 aa10.54□□□□□ -0.72
SRRM4-202ENST00000537597 SSBP4Q9BWG4 385 aaPredicted RBP10.54□□□□□ -0.72
SRRM4-202ENST00000537597 RS1O15537 224 aa10.53□□□□□ -0.72
SRRM4-202ENST00000537597 UFSP1Q6NVU6 142 aa10.53□□□□□ -0.72
SRRM4-202ENST00000537597 TRGV2A0A075B6R0 118 aa10.52□□□□□ -0.73
SRRM4-202ENST00000537597 TRAV26-1A0A087WT03 109 aa10.52□□□□□ -0.73
SRRM4-202ENST00000537597 TRAV4A0A0B4J268 109 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms