RNA–Protein interactions for RNA: ENST00000537529.6

MKS1-204, Transcript of Meckel syndrome, type 1, humanhuman

TSL 1 (best) BASIC

Gene MKS1, Length 2,083 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-204ENST00000537529 RNF152Q8N8N0 203 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 FBN2P35556 2912 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 SVEP1Q4LDE5 3571 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 UTP20O75691 2785 aaKnown RBP11.8□□□□□ -0.52
MKS1-204ENST00000537529 LINC01546A6NGU7 62 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 MED14OSP0DP75 135 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 EVI2AP22794 236 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 WFDC3Q8IUB2 231 aa11.8□□□□□ -0.52
MKS1-204ENST00000537529 S100A4P26447 101 aaKnown RBP11.79□□□□□ -0.52
MKS1-204ENST00000537529 MS4A6AQ9H2W1 248 aa11.79□□□□□ -0.52
MKS1-204ENST00000537529 IGHV4OR15-8A0A075B7B6 117 aa11.79□□□□□ -0.52
MKS1-204ENST00000537529 A0A087WW49 117 aa11.79□□□□□ -0.52
MKS1-204ENST00000537529 SYNJ2BPP57105 145 aa11.79□□□□□ -0.52
MKS1-204ENST00000537529 ANXA2RQ3ZCQ2 193 aa11.79□□□□□ -0.52
MKS1-204ENST00000537529 Q8N2B8 174 aa11.79□□□□□ -0.52
MKS1-204ENST00000537529 TEX29Q8N6K0 151 aa11.79□□□□□ -0.52
MKS1-204ENST00000537529 NUTF2P61970 127 aaKnown RBP11.78□□□□□ -0.52
MKS1-204ENST00000537529 OR2K2Q8NGT1 345 aa11.78□□□□□ -0.52
MKS1-204ENST00000537529 GAS8-AS1O95177 125 aa11.77□□□□□ -0.52
MKS1-204ENST00000537529 HOXD3P31249 432 aaPredicted RBP11.77□□□□□ -0.52
MKS1-204ENST00000537529 SNRPD3P62318 126 aaKnown RBP11.77□□□□□ -0.52
MKS1-204ENST00000537529 LRRK2Q5S007 2527 aa11.77□□□□□ -0.52
MKS1-204ENST00000537529 PRRC2AP48634 2157 aaKnown RBP11.77□□□□□ -0.53
MKS1-204ENST00000537529 hDV102S1A0JD36 115 aa11.77□□□□□ -0.53
MKS1-204ENST00000537529 KLLNB2CW77 178 aa11.77□□□□□ -0.53
MKS1-204ENST00000537529 TSPOP30536 169 aa11.77□□□□□ -0.53
MKS1-204ENST00000537529 MRAP2Q96G30 205 aa11.77□□□□□ -0.53
MKS1-204ENST00000537529 MCRIP2Q9BUT9 160 aaKnown RBP11.77□□□□□ -0.53
MKS1-204ENST00000537529 MRPS16Q9Y3D3 137 aaKnown RBP11.77□□□□□ -0.53
MKS1-204ENST00000537529 GATA1P15976 413 aaPredicted RBP11.76□□□□□ -0.53
MKS1-204ENST00000537529 LEPP41159 167 aa11.76□□□□□ -0.53
MKS1-204ENST00000537529 TFPI2P48307 235 aa11.76□□□□□ -0.53
MKS1-204ENST00000537529 PSMG4Q5JS54 123 aa11.76□□□□□ -0.53
MKS1-204ENST00000537529 Q8N8P6 123 aa11.76□□□□□ -0.53
MKS1-204ENST00000537529 ODF3Q96PU9 254 aa11.76□□□□□ -0.53
MKS1-204ENST00000537529 ZMAT5Q9UDW3 170 aaKnown RBP11.76□□□□□ -0.53
MKS1-204ENST00000537529 PHLDA3Q9Y5J5 127 aa11.76□□□□□ -0.53
MKS1-204ENST00000537529 K7EQG2 157 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 M0R381 172 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 ZNF688P0C7X2 276 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 BATFQ16520 125 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 SCRT2Q9NQ03 307 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 CSPG4Q6UVK1 2322 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 FCER1GP30273 86 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 FXYD7P58549 80 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 KIR3DS1Q14943 382 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 LGALS9BQ3B8N2 356 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 LGALS9CQ6DKI2 356 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 TMEM86BQ8N661 226 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 NRACQ8N912 160 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 IFI27L1Q96BM0 104 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 PMCHL2Q9BQD1 86 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 CELSR1Q9NYQ6 3014 aa11.75□□□□□ -0.53
MKS1-204ENST00000537529 VPS13CQ709C8 3753 aa11.74□□□□□ -0.53
MKS1-204ENST00000537529 PRSS47A8MTI9 375 aa11.74□□□□□ -0.53
MKS1-204ENST00000537529 DEFB125Q8N687 156 aa11.74□□□□□ -0.53
MKS1-204ENST00000537529 DUX5Q96PT3 197 aa11.74□□□□□ -0.53
MKS1-204ENST00000537529 GOLT1BQ9Y3E0 138 aa11.74□□□□□ -0.53
MKS1-204ENST00000537529 CELSR2Q9HCU4 2923 aa11.74□□□□□ -0.53
MKS1-204ENST00000537529 CRYBG3Q68DQ2 2970 aa11.73□□□□□ -0.53
MKS1-204ENST00000537529 TRAV26-2A0A0B4J265 109 aa11.73□□□□□ -0.53
MKS1-204ENST00000537529 A0A0J9YX75 114 aa11.73□□□□□ -0.53
MKS1-204ENST00000537529 FAM159AQ6UWV7 190 aa11.73□□□□□ -0.53
MKS1-204ENST00000537529 DPH3P1Q9H4G8 78 aa11.73□□□□□ -0.53
MKS1-204ENST00000537529 IGLV2-18A0A075B6J9 118 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 GNRH2O43555 120 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 SLC25A34Q6PIV7 304 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 LINC00469Q8N7U9 141 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 WFDC11Q8NEX6 87 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 AP1S3Q96PC3 154 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 POLQO75417 2590 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 C7orf71A4D174 169 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 RNASE3P12724 160 aaKnown RBP11.72□□□□□ -0.53
MKS1-204ENST00000537529 COL5A1-AS1Q5SY13 56 aa11.72□□□□□ -0.53
MKS1-204ENST00000537529 DUSP14O95147 198 aaKnown RBP11.71□□□□□ -0.53
MKS1-204ENST00000537529 NXPH4O95158 308 aa11.71□□□□□ -0.53
MKS1-204ENST00000537529 USP9YO00507 2555 aaPredicted RBP11.71□□□□□ -0.53
MKS1-204ENST00000537529 NAV2Q8IVL1 2488 aa11.71□□□□□ -0.54
MKS1-204ENST00000537529 LINC01619G3V211 115 aa11.71□□□□□ -0.54
MKS1-204ENST00000537529 TCTEX1D4Q5JR98 221 aa11.71□□□□□ -0.54
MKS1-204ENST00000537529 C4orf3Q8WVX3 66 aa11.71□□□□□ -0.54
MKS1-204ENST00000537529 PTPN13Q12923 2485 aa11.7□□□□□ -0.54
MKS1-204ENST00000537529 TRAV12-3A0A0B4J271 114 aa11.7□□□□□ -0.54
MKS1-204ENST00000537529 SLURP1P55000 103 aa11.7□□□□□ -0.54
MKS1-204ENST00000537529 TMEM158Q8WZ71 300 aa11.7□□□□□ -0.54
MKS1-204ENST00000537529 DPF1Q92782 380 aa11.7□□□□□ -0.54
MKS1-204ENST00000537529 TCAPO15273 167 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 SPRY2O43597 315 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 LAGE3Q14657 143 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 C18orf65Q6ZTR6 163 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 C14orf178Q8N769 122 aaPredicted RBP11.69□□□□□ -0.54
MKS1-204ENST00000537529 WFDC12Q8WWY7 111 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 C18orf15Q96N68 181 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 MGPP08493 103 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 DEFB136Q30KP8 78 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 FOXI2Q6ZQN5 318 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 SMIM2Q9BVW6 85 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 PEMTQ9UBM1 199 aa11.69□□□□□ -0.54
MKS1-204ENST00000537529 C20orf78Q9BR46 151 aa11.68□□□□□ -0.54
MKS1-204ENST00000537529 CD5LO43866 347 aa11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms